RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 USP1O94782 785 aa15.39■□□□□ 0.05
PRDM4-201ENST00000228437 RAB27AP51159 221 aa15.39■□□□□ 0.05
PRDM4-201ENST00000228437 ZCWPW2Q504Y3 356 aa15.39■□□□□ 0.05
PRDM4-201ENST00000228437 MIER3Q7Z3K6 550 aa15.39■□□□□ 0.05
PRDM4-201ENST00000228437 C1orf112Q9NSG2 853 aa15.39■□□□□ 0.05
PRDM4-201ENST00000228437 A0A1W2PPM1 405 aa15.39■□□□□ 0.05
PRDM4-201ENST00000228437 MYH7BA7E2Y1 1941 aa15.39■□□□□ 0.05
PRDM4-201ENST00000228437 VCAM1P19320 739 aa15.39■□□□□ 0.05
PRDM4-201ENST00000228437 RRM1P23921 792 aa15.39■□□□□ 0.05
PRDM4-201ENST00000228437 MAN1A1P33908 653 aa15.39■□□□□ 0.05
PRDM4-201ENST00000228437 DLG4P78352 724 aa15.39■□□□□ 0.05
PRDM4-201ENST00000228437 RASA3Q14644 834 aa15.39■□□□□ 0.05
PRDM4-201ENST00000228437 NKX1-1Q15270 411 aaPredicted RBP15.39■□□□□ 0.05
PRDM4-201ENST00000228437 CRYBG1Q9Y4K1 1723 aa15.39■□□□□ 0.05
PRDM4-201ENST00000228437 PEX11AO75192 247 aa15.39■□□□□ 0.05
PRDM4-201ENST00000228437 NPEPPSP55786 919 aa15.39■□□□□ 0.05
PRDM4-201ENST00000228437 PPATQ06203 517 aa15.39■□□□□ 0.05
PRDM4-201ENST00000228437 FAM182BQ5T319 152 aa15.39■□□□□ 0.05
PRDM4-201ENST00000228437 GPATCH4Q5T3I0 446 aaKnown RBP15.39■□□□□ 0.05
PRDM4-201ENST00000228437 ARID3BQ8IVW6 561 aaPredicted RBP15.39■□□□□ 0.05
PRDM4-201ENST00000228437 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.39■□□□□ 0.05
PRDM4-201ENST00000228437 CNKSR1Q969H4 720 aa15.39■□□□□ 0.05
PRDM4-201ENST00000228437 NYXQ9GZU5 481 aa15.39■□□□□ 0.05
PRDM4-201ENST00000228437 GGA1Q9UJY5 639 aa15.39■□□□□ 0.05
PRDM4-201ENST00000228437 TRAF3IP3Q9Y228 551 aa15.39■□□□□ 0.05
PRDM4-201ENST00000228437 PCDHB4Q9Y5E5 795 aa15.39■□□□□ 0.05
PRDM4-201ENST00000228437 MYL2P10916 166 aa15.38■□□□□ 0.05
PRDM4-201ENST00000228437 PRKCIP41743 596 aa15.38■□□□□ 0.05
PRDM4-201ENST00000228437 SCNN1BP51168 640 aa15.38■□□□□ 0.05
PRDM4-201ENST00000228437 ICA1Q05084 483 aa15.38■□□□□ 0.05
PRDM4-201ENST00000228437 TRIP10Q15642 601 aa15.38■□□□□ 0.05
PRDM4-201ENST00000228437 ARSHQ5FYA8 562 aa15.38■□□□□ 0.05
PRDM4-201ENST00000228437 ZNF577Q9BSK1 485 aa15.38■□□□□ 0.05
PRDM4-201ENST00000228437 OSBPL8Q9BZF1 889 aa15.38■□□□□ 0.05
PRDM4-201ENST00000228437 ZC3H12CQ9C0D7 883 aaKnown RBP15.38■□□□□ 0.05
PRDM4-201ENST00000228437 CLIC5Q9NZA1 410 aa15.38■□□□□ 0.05
PRDM4-201ENST00000228437 SSTR1P30872 391 aa15.38■□□□□ 0.05
PRDM4-201ENST00000228437 AP2B1P63010 937 aa15.38■□□□□ 0.05
PRDM4-201ENST00000228437 XKR9Q5GH70 373 aa15.38■□□□□ 0.05
PRDM4-201ENST00000228437 SLC51AQ86UW1 340 aa15.38■□□□□ 0.05
PRDM4-201ENST00000228437 EFCAB3Q8N7B9 438 aa15.38■□□□□ 0.05
PRDM4-201ENST00000228437 ACAP3Q96P50 834 aa15.38■□□□□ 0.05
PRDM4-201ENST00000228437 CBWD1Q9BRT8 395 aa15.38■□□□□ 0.05
PRDM4-201ENST00000228437 LRRC4BQ9NT99 713 aa15.38■□□□□ 0.05
PRDM4-201ENST00000228437 E2F8A0AVK6 867 aa15.38■□□□□ 0.05
PRDM4-201ENST00000228437 ZNF543Q08ER8 600 aa15.38■□□□□ 0.05
PRDM4-201ENST00000228437 NFIXQ14938 502 aa15.38■□□□□ 0.05
PRDM4-201ENST00000228437 PPP1R18Q6NYC8 613 aa15.38■□□□□ 0.05
PRDM4-201ENST00000228437 C3orf62Q6ZUJ4 267 aa15.38■□□□□ 0.05
PRDM4-201ENST00000228437 GORASP1Q9BQQ3 440 aa15.38■□□□□ 0.05
PRDM4-201ENST00000228437 AGPAT3Q9NRZ7 376 aa15.38■□□□□ 0.05
PRDM4-201ENST00000228437 MAGED2Q9UNF1 606 aaPredicted RBP15.38■□□□□ 0.05
PRDM4-201ENST00000228437 WASF2Q9Y6W5 498 aa15.38■□□□□ 0.05
PRDM4-201ENST00000228437 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.38■□□□□ 0.05
PRDM4-201ENST00000228437 MEI4A8MW99 385 aa15.38■□□□□ 0.05
PRDM4-201ENST00000228437 ASPHQ12797 758 aa15.38■□□□□ 0.05
PRDM4-201ENST00000228437 MED21Q13503 144 aa15.38■□□□□ 0.05
PRDM4-201ENST00000228437 MMEL1Q495T6 779 aa15.38■□□□□ 0.05
PRDM4-201ENST00000228437 EMC10Q5UCC4 262 aa15.38■□□□□ 0.05
PRDM4-201ENST00000228437 RINT1Q6NUQ1 792 aa15.38■□□□□ 0.05
PRDM4-201ENST00000228437 CLPTM1LQ96KA5 538 aa15.38■□□□□ 0.05
PRDM4-201ENST00000228437 PPP1R36Q96LQ0 422 aa15.38■□□□□ 0.05
PRDM4-201ENST00000228437 MANSC1Q9H8J5 431 aa15.38■□□□□ 0.05
PRDM4-201ENST00000228437 CAMTA2O94983 1202 aa15.37■□□□□ 0.05
PRDM4-201ENST00000228437 PGM3O95394 542 aa15.37■□□□□ 0.05
PRDM4-201ENST00000228437 GGPS1O95749 300 aa15.37■□□□□ 0.05
PRDM4-201ENST00000228437 SLC34A1Q06495 639 aa15.37■□□□□ 0.05
PRDM4-201ENST00000228437 ARHGAP27Q6ZUM4 889 aa15.37■□□□□ 0.05
PRDM4-201ENST00000228437 CALN1Q9BXU9 219 aa15.37■□□□□ 0.05
PRDM4-201ENST00000228437 PACSIN3Q9UKS6 424 aa15.37■□□□□ 0.05
PRDM4-201ENST00000228437 NRXN3Q9Y4C0 1643 aa15.37■□□□□ 0.05
PRDM4-201ENST00000228437 COPEO14579 308 aa15.37■□□□□ 0.05
PRDM4-201ENST00000228437 TLR3O15455 904 aaKnown RBP15.37■□□□□ 0.05
PRDM4-201ENST00000228437 BGNP21810 368 aa15.37■□□□□ 0.05
PRDM4-201ENST00000228437 IRGCQ6NXR0 463 aa15.37■□□□□ 0.05
PRDM4-201ENST00000228437 USP37Q86T82 979 aa15.37■□□□□ 0.05
PRDM4-201ENST00000228437 XXYLT1Q8NBI6 393 aa15.37■□□□□ 0.05
PRDM4-201ENST00000228437 ZNF75CPQ92670 426 aaPredicted RBP15.37■□□□□ 0.05
PRDM4-201ENST00000228437 MAK16Q9BXY0 300 aaKnown RBP15.37■□□□□ 0.05
PRDM4-201ENST00000228437 HNRNPDLO14979 420 aaKnown RBP15.37■□□□□ 0.05
PRDM4-201ENST00000228437 ACADSP16219 412 aa15.37■□□□□ 0.05
PRDM4-201ENST00000228437 MCL1Q07820 350 aa15.37■□□□□ 0.05
PRDM4-201ENST00000228437 CERKLQ49MI3 558 aaPredicted RBP15.37■□□□□ 0.05
PRDM4-201ENST00000228437 ART4Q93070 314 aa15.37■□□□□ 0.05
PRDM4-201ENST00000228437 TMEM120AQ9BXJ8 343 aa15.37■□□□□ 0.05
PRDM4-201ENST00000228437 ARL8BQ9NVJ2 186 aa15.37■□□□□ 0.05
PRDM4-201ENST00000228437 SLC1A5Q15758 541 aa15.36■□□□□ 0.05
PRDM4-201ENST00000228437 TOPORSQ9NS56 1045 aaPredicted RBP15.36■□□□□ 0.05
PRDM4-201ENST00000228437 R3HDM2Q9Y2K5 976 aaKnown RBP15.36■□□□□ 0.05
PRDM4-201ENST00000228437 KCNQ2O43526 872 aa15.36■□□□□ 0.05
PRDM4-201ENST00000228437 SETSIPP0DME0 302 aa15.36■□□□□ 0.05
PRDM4-201ENST00000228437 PTGIRP43119 386 aa15.36■□□□□ 0.05
PRDM4-201ENST00000228437 RNF43Q68DV7 783 aa15.36■□□□□ 0.05
PRDM4-201ENST00000228437 OTOAQ7RTW8 1153 aa15.36■□□□□ 0.05
PRDM4-201ENST00000228437 RNF168Q8IYW5 571 aaPredicted RBP15.36■□□□□ 0.05
PRDM4-201ENST00000228437 POU5F2Q8N7G0 328 aa15.36■□□□□ 0.05
PRDM4-201ENST00000228437 TCP10LQ8TDR4 215 aa15.36■□□□□ 0.05
PRDM4-201ENST00000228437 EPAS1Q99814 870 aa15.36■□□□□ 0.05
PRDM4-201ENST00000228437 KIFC3Q9BVG8 833 aa15.36■□□□□ 0.05
PRDM4-201ENST00000228437 PCSK1NQ9UHG2 260 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms