RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 MYLK4Q86YV6 388 aaPredicted RBP12.22□□□□□ -0.45
CCND1-201ENST00000227507 FAM186BQ8IYM0 893 aa12.22□□□□□ -0.45
CCND1-201ENST00000227507 C4orf33Q8N1A6 199 aa12.22□□□□□ -0.45
CCND1-201ENST00000227507 SPIRE2Q8WWL2 714 aa12.22□□□□□ -0.45
CCND1-201ENST00000227507 POMGNT1Q8WZA1 660 aa12.22□□□□□ -0.45
CCND1-201ENST00000227507 KRT35Q92764 455 aa12.22□□□□□ -0.45
CCND1-201ENST00000227507 L3MBTL3Q96JM7 780 aaPredicted RBP12.22□□□□□ -0.45
CCND1-201ENST00000227507 PIDD1Q9HB75 910 aa12.22□□□□□ -0.45
CCND1-201ENST00000227507 METTL14Q9HCE5 456 aaKnown RBP12.22□□□□□ -0.45
CCND1-201ENST00000227507 CFAP69A5D8W1 941 aa12.21□□□□□ -0.45
CCND1-201ENST00000227507 RBAK-RBAKDNI3L0D1 243 aa12.21□□□□□ -0.45
CCND1-201ENST00000227507 PODXLO00592 558 aa12.21□□□□□ -0.45
CCND1-201ENST00000227507 RIPK2O43353 540 aa12.21□□□□□ -0.45
CCND1-201ENST00000227507 KRT19P08727 400 aa12.21□□□□□ -0.45
CCND1-201ENST00000227507 CYP2B6P20813 491 aa12.21□□□□□ -0.45
CCND1-201ENST00000227507 TPP2P29144 1249 aaPredicted RBP12.21□□□□□ -0.45
CCND1-201ENST00000227507 MTM1Q13496 603 aa12.21□□□□□ -0.45
CCND1-201ENST00000227507 MCPH1Q8NEM0 835 aa12.21□□□□□ -0.45
CCND1-201ENST00000227507 TTC8Q8TAM2 541 aa12.21□□□□□ -0.45
CCND1-201ENST00000227507 CENPTQ96BT3 561 aa12.21□□□□□ -0.45
CCND1-201ENST00000227507 ARHGEF26Q96DR7 871 aa12.21□□□□□ -0.45
CCND1-201ENST00000227507 CDC42EP4Q9H3Q1 356 aaKnown RBP12.21□□□□□ -0.45
CCND1-201ENST00000227507 RXFP1Q9HBX9 757 aa12.21□□□□□ -0.45
CCND1-201ENST00000227507 RGL1Q9NZL6 768 aa12.21□□□□□ -0.45
CCND1-201ENST00000227507 ZNF232Q9UNY5 417 aa12.21□□□□□ -0.45
CCND1-201ENST00000227507 NR3C1P04150 777 aa12.21□□□□□ -0.45
CCND1-201ENST00000227507 MYL3P08590 195 aa12.21□□□□□ -0.45
CCND1-201ENST00000227507 SKIP12755 728 aa12.21□□□□□ -0.45
CCND1-201ENST00000227507 TBC1D25Q3MII6 688 aa12.21□□□□□ -0.45
CCND1-201ENST00000227507 PDCD7Q8N8D1 485 aaKnown RBP12.21□□□□□ -0.45
CCND1-201ENST00000227507 ANAPC5Q9UJX4 755 aa12.21□□□□□ -0.45
CCND1-201ENST00000227507 PCDHA10Q9Y5I2 948 aa12.21□□□□□ -0.45
CCND1-201ENST00000227507 GLI3P10071 1580 aa12.21□□□□□ -0.45
CCND1-201ENST00000227507 KIAA0391O15091 583 aaKnown RBP12.21□□□□□ -0.46
CCND1-201ENST00000227507 CAPN15O75808 1086 aa12.21□□□□□ -0.46
CCND1-201ENST00000227507 RTN3O95197 1032 aaPredicted RBP12.21□□□□□ -0.46
CCND1-201ENST00000227507 MYBP10242 640 aa12.21□□□□□ -0.46
CCND1-201ENST00000227507 PYGBP11216 843 aa12.21□□□□□ -0.46
CCND1-201ENST00000227507 KRT5P13647 590 aa12.21□□□□□ -0.46
CCND1-201ENST00000227507 CHRNA3P32297 505 aa12.21□□□□□ -0.46
CCND1-201ENST00000227507 YARSP54577 528 aaKnown RBP12.21□□□□□ -0.46
CCND1-201ENST00000227507 DHX34Q14147 1143 aaKnown RBP12.21□□□□□ -0.46
CCND1-201ENST00000227507 CFAP157Q5JU67 520 aa12.21□□□□□ -0.46
CCND1-201ENST00000227507 ARHGAP22Q7Z5H3 698 aa12.21□□□□□ -0.46
CCND1-201ENST00000227507 DRAXINQ8NBI3 349 aaPredicted RBP12.21□□□□□ -0.46
CCND1-201ENST00000227507 ATG4AQ8WYN0 398 aa12.21□□□□□ -0.46
CCND1-201ENST00000227507 ALG3Q92685 438 aa12.21□□□□□ -0.46
CCND1-201ENST00000227507 SPATA33Q96N06 139 aa12.21□□□□□ -0.46
CCND1-201ENST00000227507 TAS2R14Q9NYV8 317 aa12.21□□□□□ -0.46
CCND1-201ENST00000227507 ANKFY1Q9P2R3 1169 aa12.21□□□□□ -0.46
CCND1-201ENST00000227507 GABBR1Q9UBS5 961 aa12.21□□□□□ -0.46
CCND1-201ENST00000227507 TMEM59LQ9UK28 342 aa12.21□□□□□ -0.46
CCND1-201ENST00000227507 USTQ9Y2C2 406 aa12.21□□□□□ -0.46
CCND1-201ENST00000227507 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.21□□□□□ -0.46
CCND1-201ENST00000227507 NVLO15381 856 aaKnown RBP12.2□□□□□ -0.46
CCND1-201ENST00000227507 TBC1D12O60347 775 aa12.2□□□□□ -0.46
CCND1-201ENST00000227507 ATF2P15336 505 aa12.2□□□□□ -0.46
CCND1-201ENST00000227507 MRPS35P82673 323 aaKnown RBP12.2□□□□□ -0.46
CCND1-201ENST00000227507 LRRC57Q8N9N7 239 aa12.2□□□□□ -0.46
CCND1-201ENST00000227507 IKZF4Q9H2S9 585 aa12.2□□□□□ -0.46
CCND1-201ENST00000227507 ZNF302Q9NR11 478 aa12.2□□□□□ -0.46
CCND1-201ENST00000227507 SLC9A2Q9UBY0 812 aa12.2□□□□□ -0.46
CCND1-201ENST00000227507 MANSC4A6NHS7 340 aaPredicted RBP12.2□□□□□ -0.46
CCND1-201ENST00000227507 CLDN3O15551 220 aa12.2□□□□□ -0.46
CCND1-201ENST00000227507 AKAP3O75969 853 aa12.2□□□□□ -0.46
CCND1-201ENST00000227507 PTPRAP18433 802 aa12.2□□□□□ -0.46
CCND1-201ENST00000227507 KCNA3P22001 575 aa12.2□□□□□ -0.46
CCND1-201ENST00000227507 ECM1Q16610 540 aa12.2□□□□□ -0.46
CCND1-201ENST00000227507 KNOP1Q1ED39 458 aaKnown RBP12.2□□□□□ -0.46
CCND1-201ENST00000227507 DUPD1Q68J44 220 aa12.2□□□□□ -0.46
CCND1-201ENST00000227507 SWSAP1Q6NVH7 229 aa12.2□□□□□ -0.46
CCND1-201ENST00000227507 XRRA1Q6P2D8 792 aa12.2□□□□□ -0.46
CCND1-201ENST00000227507 ACCSQ96QU6 501 aa12.2□□□□□ -0.46
CCND1-201ENST00000227507 TSPAN18Q96SJ8 248 aa12.2□□□□□ -0.46
CCND1-201ENST00000227507 DDX50Q9BQ39 737 aaKnown RBP12.2□□□□□ -0.46
CCND1-201ENST00000227507 PLVAPQ9BX97 442 aa12.2□□□□□ -0.46
CCND1-201ENST00000227507 MYLK2Q9H1R3 596 aa12.2□□□□□ -0.46
CCND1-201ENST00000227507 RIOX1Q9H6W3 641 aa12.2□□□□□ -0.46
CCND1-201ENST00000227507 JPH1Q9HDC5 661 aaPredicted RBP12.2□□□□□ -0.46
CCND1-201ENST00000227507 UBE2TQ9NPD8 197 aaPredicted RBP12.2□□□□□ -0.46
CCND1-201ENST00000227507 CICQ96RK0 1608 aaPredicted RBP12.2□□□□□ -0.46
CCND1-201ENST00000227507 TXNDC9O14530 226 aa12.2□□□□□ -0.46
CCND1-201ENST00000227507 OPHN1O60890 802 aa12.2□□□□□ -0.46
CCND1-201ENST00000227507 PHF2O75151 1096 aa12.2□□□□□ -0.46
CCND1-201ENST00000227507 HOXA7P31268 230 aaPredicted RBP12.2□□□□□ -0.46
CCND1-201ENST00000227507 CASP5P51878 434 aa12.2□□□□□ -0.46
CCND1-201ENST00000227507 PSMC5P62195 406 aa12.2□□□□□ -0.46
CCND1-201ENST00000227507 VGLL4Q14135 290 aa12.2□□□□□ -0.46
CCND1-201ENST00000227507 EPHA7Q15375 998 aa12.2□□□□□ -0.46
CCND1-201ENST00000227507 FYB2Q5VWT5 728 aa12.2□□□□□ -0.46
CCND1-201ENST00000227507 GET4Q7L5D6 327 aaPredicted RBP12.2□□□□□ -0.46
CCND1-201ENST00000227507 KIFAP3Q92845 792 aa12.2□□□□□ -0.46
CCND1-201ENST00000227507 SLCO1B3Q9NPD5 702 aa12.2□□□□□ -0.46
CCND1-201ENST00000227507 SYNPO2Q9UMS6 1093 aa12.2□□□□□ -0.46
CCND1-201ENST00000227507 TBX3O15119 743 aa12.2□□□□□ -0.46
CCND1-201ENST00000227507 GAS8O95995 478 aa12.2□□□□□ -0.46
CCND1-201ENST00000227507 LINGO3P0C6S8 592 aa12.2□□□□□ -0.46
CCND1-201ENST00000227507 CALB2P22676 271 aa12.2□□□□□ -0.46
CCND1-201ENST00000227507 SCNN1BP51168 640 aa12.2□□□□□ -0.46
CCND1-201ENST00000227507 KRT17Q04695 432 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms