RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 CABYRO75952 493 aa18.05■□□□□ 0.48
TVP23C-201ENST00000225576 URI1O94763 535 aaPredicted RBP18.05■□□□□ 0.48
TVP23C-201ENST00000225576 SGPL1O95470 568 aa18.05■□□□□ 0.48
TVP23C-201ENST00000225576 GTF2F1P35269 517 aaKnown RBP eCLIP18.05■□□□□ 0.483e-7■■■■■ 29.2
TVP23C-201ENST00000225576 TRPC3Q13507 836 aa18.05■□□□□ 0.48
TVP23C-201ENST00000225576 TUBB2AQ13885 445 aa18.05■□□□□ 0.48
TVP23C-201ENST00000225576 SPOPLQ6IQ16 392 aa18.05■□□□□ 0.48
TVP23C-201ENST00000225576 GDF6Q6KF10 455 aaPredicted RBP18.05■□□□□ 0.48
TVP23C-201ENST00000225576 RNF180Q86T96 592 aa18.05■□□□□ 0.48
TVP23C-201ENST00000225576 SERINC5Q86VE9 423 aa18.05■□□□□ 0.48
TVP23C-201ENST00000225576 TRIM58Q8NG06 486 aa18.05■□□□□ 0.48
TVP23C-201ENST00000225576 EPS8L1Q8TE68 723 aa18.05■□□□□ 0.48
TVP23C-201ENST00000225576 U2AF1L4Q8WU68 220 aaKnown RBP18.05■□□□□ 0.48
TVP23C-201ENST00000225576 TMEM40Q8WWA1 233 aa18.05■□□□□ 0.48
TVP23C-201ENST00000225576 TAF4BQ92750 862 aa18.05■□□□□ 0.48
TVP23C-201ENST00000225576 ELMO3Q96BJ8 720 aa18.05■□□□□ 0.48
TVP23C-201ENST00000225576 TUBB2BQ9BVA1 445 aa18.05■□□□□ 0.48
TVP23C-201ENST00000225576 CCDC94Q9BW85 323 aaPredicted RBP18.05■□□□□ 0.48
TVP23C-201ENST00000225576 PLEKHA5Q9HAU0 1116 aa18.05■□□□□ 0.48
TVP23C-201ENST00000225576 NOCTQ9UK39 431 aaKnown RBP18.05■□□□□ 0.48
TVP23C-201ENST00000225576 NUB1Q9Y5A7 615 aa18.05■□□□□ 0.48
TVP23C-201ENST00000225576 NPTXRO95502 500 aa18.04■□□□□ 0.48
TVP23C-201ENST00000225576 H2AFZP0C0S5 128 aa18.04■□□□□ 0.48
TVP23C-201ENST00000225576 BPIFB4P59827 614 aa18.04■□□□□ 0.48
TVP23C-201ENST00000225576 MYL6P60660 151 aa18.04■□□□□ 0.48
TVP23C-201ENST00000225576 MRPS6P82932 125 aaKnown RBP18.04■□□□□ 0.48
TVP23C-201ENST00000225576 H2AFVQ71UI9 128 aa18.04■□□□□ 0.48
TVP23C-201ENST00000225576 PACSIN1Q9BY11 444 aa18.04■□□□□ 0.48
TVP23C-201ENST00000225576 CNTN6Q9UQ52 1028 aa18.04■□□□□ 0.48
TVP23C-201ENST00000225576 C2CD2Q9Y426 696 aa18.04■□□□□ 0.48
TVP23C-201ENST00000225576 M0QZ92 97 aa18.03■□□□□ 0.48
TVP23C-201ENST00000225576 NFICP08651 508 aa18.03■□□□□ 0.48
TVP23C-201ENST00000225576 CYP11B1P15538 503 aa18.03■□□□□ 0.48
TVP23C-201ENST00000225576 ACO1P21399 889 aaKnown RBP18.03■□□□□ 0.48
TVP23C-201ENST00000225576 PDE6CP51160 858 aa18.03■□□□□ 0.48
TVP23C-201ENST00000225576 FAM47CQ5HY64 1035 aa18.03■□□□□ 0.48
TVP23C-201ENST00000225576 JADE1Q6IE81 842 aa18.03■□□□□ 0.48
TVP23C-201ENST00000225576 NOP9Q86U38 636 aaKnown RBP18.03■□□□□ 0.48
TVP23C-201ENST00000225576 SLC47A2Q86VL8 602 aa18.03■□□□□ 0.48
TVP23C-201ENST00000225576 SLC20A1Q8WUM9 679 aa18.03■□□□□ 0.48
TVP23C-201ENST00000225576 FAXDC2Q96IV6 333 aa18.03■□□□□ 0.48
TVP23C-201ENST00000225576 NOX5Q96PH1 765 aa18.03■□□□□ 0.48
TVP23C-201ENST00000225576 ARID3AQ99856 593 aa18.03■□□□□ 0.48
TVP23C-201ENST00000225576 SALL4Q9UJQ4 1053 aa18.03■□□□□ 0.48
TVP23C-201ENST00000225576 TRPV2Q9Y5S1 764 aa18.03■□□□□ 0.48
TVP23C-201ENST00000225576 GRIN2DO15399 1336 aa18.03■□□□□ 0.48
TVP23C-201ENST00000225576 ANO9A1A5B4 782 aa18.03■□□□□ 0.48
TVP23C-201ENST00000225576 INHAP05111 366 aa18.03■□□□□ 0.48
TVP23C-201ENST00000225576 HSPA1AP0DMV8 641 aaKnown RBP18.03■□□□□ 0.48
TVP23C-201ENST00000225576 HSPA1BP0DMV9 641 aaKnown RBP18.03■□□□□ 0.48
TVP23C-201ENST00000225576 KRT5P13647 590 aa18.03■□□□□ 0.48
TVP23C-201ENST00000225576 CHRNB2P17787 502 aa18.03■□□□□ 0.48
TVP23C-201ENST00000225576 CDR2Q01850 454 aa18.03■□□□□ 0.48
TVP23C-201ENST00000225576 PTPN11Q06124 597 aaPredicted RBP18.03■□□□□ 0.48
TVP23C-201ENST00000225576 RPUSD2Q8IZ73 545 aaKnown RBP18.03■□□□□ 0.48
TVP23C-201ENST00000225576 TNS4Q8IZW8 715 aa18.03■□□□□ 0.48
TVP23C-201ENST00000225576 ALS2CR12Q96Q35 445 aa18.03■□□□□ 0.48
TVP23C-201ENST00000225576 TSEN34Q9BSV6 310 aaKnown RBP18.03■□□□□ 0.48
TVP23C-201ENST00000225576 NIF3L1Q9GZT8 377 aa18.03■□□□□ 0.48
TVP23C-201ENST00000225576 XYLT2Q9H1B5 865 aa18.03■□□□□ 0.48
TVP23C-201ENST00000225576 HMX1Q9NP08 348 aaPredicted RBP18.03■□□□□ 0.48
TVP23C-201ENST00000225576 DERAQ9Y315 318 aa18.03■□□□□ 0.48
TVP23C-201ENST00000225576 PCDHB2Q9Y5E7 798 aa18.03■□□□□ 0.48
TVP23C-201ENST00000225576 UQCRHLA0A096LP55 91 aa18.02■□□□□ 0.47
TVP23C-201ENST00000225576 A0A0A6YYK5 440 aaPredicted RBP18.02■□□□□ 0.47
TVP23C-201ENST00000225576 MOCS3O95396 460 aa18.02■□□□□ 0.47
TVP23C-201ENST00000225576 MYCNP04198 464 aaPredicted RBP18.02■□□□□ 0.47
TVP23C-201ENST00000225576 UQCRHP07919 91 aa18.02■□□□□ 0.47
TVP23C-201ENST00000225576 GZMAP12544 262 aa18.02■□□□□ 0.47
TVP23C-201ENST00000225576 TMEM132DQ14C87 1099 aa18.02■□□□□ 0.47
TVP23C-201ENST00000225576 SCARA3Q6AZY7 606 aa18.02■□□□□ 0.47
TVP23C-201ENST00000225576 ZNF677Q86XU0 584 aa18.02■□□□□ 0.47
TVP23C-201ENST00000225576 UBR7Q8N806 425 aa18.02■□□□□ 0.47
TVP23C-201ENST00000225576 C1orf127Q8N9H9 656 aa18.02■□□□□ 0.47
TVP23C-201ENST00000225576 DDX1Q92499 740 aaKnown RBP18.02■□□□□ 0.47
TVP23C-201ENST00000225576 EIF2AQ9BY44 585 aaKnown RBP18.02■□□□□ 0.47
TVP23C-201ENST00000225576 SIX4Q9UIU6 781 aa18.02■□□□□ 0.47
TVP23C-201ENST00000225576 PIN4Q9Y237 131 aaKnown RBP18.02■□□□□ 0.47
TVP23C-201ENST00000225576 MRFAP1Q9Y605 127 aa18.02■□□□□ 0.47
TVP23C-201ENST00000225576 CDY2AQ9Y6F7 541 aa18.02■□□□□ 0.47
TVP23C-201ENST00000225576 CAPN6Q9Y6Q1 641 aa18.02■□□□□ 0.47
TVP23C-201ENST00000225576 UMODL1Q5DID0 1318 aa18.01■□□□□ 0.47
TVP23C-201ENST00000225576 MOXD2PA6NHM9 499 aa18.01■□□□□ 0.47
TVP23C-201ENST00000225576 SLU7O95391 586 aaKnown RBP18.01■□□□□ 0.47
TVP23C-201ENST00000225576 TMEM253P0C7T8 217 aa18.01■□□□□ 0.47
TVP23C-201ENST00000225576 ATICP31939 592 aa18.01■□□□□ 0.47
TVP23C-201ENST00000225576 GRK4P32298 578 aa18.01■□□□□ 0.47
TVP23C-201ENST00000225576 ACLYP53396 1101 aa18.01■□□□□ 0.47
TVP23C-201ENST00000225576 YARSP54577 528 aaKnown RBP18.01■□□□□ 0.47
TVP23C-201ENST00000225576 GALCP54803 685 aa18.01■□□□□ 0.47
TVP23C-201ENST00000225576 ZNF699Q32M78 642 aa18.01■□□□□ 0.47
TVP23C-201ENST00000225576 LHX8Q68G74 356 aa18.01■□□□□ 0.47
TVP23C-201ENST00000225576 CXorf38Q8TB03 319 aa18.01■□□□□ 0.47
TVP23C-201ENST00000225576 ISCUQ9H1K1 167 aa18.01■□□□□ 0.47
TVP23C-201ENST00000225576 VRTNQ9H8Y1 702 aa18.01■□□□□ 0.47
TVP23C-201ENST00000225576 SEPT11Q9NVA2 429 aaKnown RBP18.01■□□□□ 0.47
TVP23C-201ENST00000225576 SNTG2Q9NY99 539 aa18.01■□□□□ 0.47
TVP23C-201ENST00000225576 JRKLQ9Y4A0 524 aa18.01■□□□□ 0.47
TVP23C-201ENST00000225576 PCDHB4Q9Y5E5 795 aa18.01■□□□□ 0.47
TVP23C-201ENST00000225576 ANKRD62A6NC57 917 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms