RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 RNF168Q8IYW5 571 aaPredicted RBP15.62■□□□□ 0.09
SUPT4H1-201ENST00000225504 MAFAQ8NHW3 353 aaPredicted RBP15.62■□□□□ 0.09
SUPT4H1-201ENST00000225504 GOLGA5Q8TBA6 731 aa15.62■□□□□ 0.09
SUPT4H1-201ENST00000225504 PLEKHO2Q8TD55 490 aa15.62■□□□□ 0.09
SUPT4H1-201ENST00000225504 EEF2KMTQ96G04 330 aa15.62■□□□□ 0.09
SUPT4H1-201ENST00000225504 POP1Q99575 1024 aaKnown RBP15.62■□□□□ 0.09
SUPT4H1-201ENST00000225504 GZF1Q9H116 711 aaPredicted RBP15.62■□□□□ 0.09
SUPT4H1-201ENST00000225504 ZBP1Q9H171 429 aa15.62■□□□□ 0.09
SUPT4H1-201ENST00000225504 UBQLN1Q9UMX0 589 aaKnown RBP15.62■□□□□ 0.09
SUPT4H1-201ENST00000225504 EYSQ5T1H1 3165 aa15.61■□□□□ 0.09
SUPT4H1-201ENST00000225504 PER2O15055 1255 aa15.61■□□□□ 0.09
SUPT4H1-201ENST00000225504 KIF20AO95235 890 aa15.61■□□□□ 0.09
SUPT4H1-201ENST00000225504 IL18RAPO95256 599 aa15.61■□□□□ 0.09
SUPT4H1-201ENST00000225504 LRPAP1P30533 357 aa15.61■□□□□ 0.09
SUPT4H1-201ENST00000225504 RPL9P32969 192 aaKnown RBP15.61■□□□□ 0.09
SUPT4H1-201ENST00000225504 BRCC3P46736 316 aa15.61■□□□□ 0.09
SUPT4H1-201ENST00000225504 COBLL1Q53SF7 1204 aa15.61■□□□□ 0.09
SUPT4H1-201ENST00000225504 LMBRD2Q68DH5 695 aaPredicted RBP15.61■□□□□ 0.09
SUPT4H1-201ENST00000225504 FUT10Q6P4F1 479 aa15.61■□□□□ 0.09
SUPT4H1-201ENST00000225504 RBM23Q86U06 439 aaKnown RBP15.61■□□□□ 0.09
SUPT4H1-201ENST00000225504 SLC9A9Q8IVB4 645 aa15.61■□□□□ 0.09
SUPT4H1-201ENST00000225504 MRPL43Q8N983 215 aaKnown RBP15.61■□□□□ 0.09
SUPT4H1-201ENST00000225504 DDX27Q96GQ7 796 aaKnown RBP15.61■□□□□ 0.09
SUPT4H1-201ENST00000225504 UROC1Q96N76 676 aa15.61■□□□□ 0.09
SUPT4H1-201ENST00000225504 KIAA1586Q9HCI6 787 aa15.61■□□□□ 0.09
SUPT4H1-201ENST00000225504 PRDM6Q9NQX0 595 aa15.61■□□□□ 0.09
SUPT4H1-201ENST00000225504 ENTPD7Q9NQZ7 604 aa15.61■□□□□ 0.09
SUPT4H1-201ENST00000225504 DERAQ9Y315 318 aa15.61■□□□□ 0.09
SUPT4H1-201ENST00000225504 CARNS1A5YM72 827 aa15.6■□□□□ 0.09
SUPT4H1-201ENST00000225504 TRIM49BA6NDI0 452 aa15.6■□□□□ 0.09
SUPT4H1-201ENST00000225504 CALUO43852 315 aaPredicted RBP15.6■□□□□ 0.09
SUPT4H1-201ENST00000225504 LILRB3O75022 631 aa15.6■□□□□ 0.09
SUPT4H1-201ENST00000225504 CTSAP10619 480 aa15.6■□□□□ 0.09
SUPT4H1-201ENST00000225504 CYP3A5P20815 502 aa15.6■□□□□ 0.09
SUPT4H1-201ENST00000225504 TFAMQ00059 246 aaKnown RBP15.6■□□□□ 0.09
SUPT4H1-201ENST00000225504 CYP24A1Q07973 514 aa15.6■□□□□ 0.09
SUPT4H1-201ENST00000225504 HYAL1Q12794 435 aa15.6■□□□□ 0.09
SUPT4H1-201ENST00000225504 KIAA0319Q5VV43 1072 aa15.6■□□□□ 0.09
SUPT4H1-201ENST00000225504 OR5B17Q8NGF7 314 aa15.6■□□□□ 0.09
SUPT4H1-201ENST00000225504 TMEM174Q8WUU8 243 aa15.6■□□□□ 0.09
SUPT4H1-201ENST00000225504 ZNF516Q92618 1163 aa15.6■□□□□ 0.09
SUPT4H1-201ENST00000225504 CCDC127Q96BQ5 260 aa15.6■□□□□ 0.09
SUPT4H1-201ENST00000225504 MFSD14AQ96MC6 490 aa15.6■□□□□ 0.09
SUPT4H1-201ENST00000225504 TSPAN18Q96SJ8 248 aa15.6■□□□□ 0.09
SUPT4H1-201ENST00000225504 NUP62CLQ9H1M0 184 aa15.6■□□□□ 0.09
SUPT4H1-201ENST00000225504 NSUN3Q9H649 340 aaKnown RBP15.6■□□□□ 0.09
SUPT4H1-201ENST00000225504 IGFLR1Q9H665 355 aa15.6■□□□□ 0.09
SUPT4H1-201ENST00000225504 DPP3Q9NY33 737 aa15.6■□□□□ 0.09
SUPT4H1-201ENST00000225504 C2CD2Q9Y426 696 aa15.6■□□□□ 0.09
SUPT4H1-201ENST00000225504 COL6A3P12111 3177 aa15.6■□□□□ 0.09
SUPT4H1-201ENST00000225504 ANO9A1A5B4 782 aa15.59■□□□□ 0.09
SUPT4H1-201ENST00000225504 C2orf71A6NGG8 1288 aa15.59■□□□□ 0.09
SUPT4H1-201ENST00000225504 TMEM189-UBE2V1I3L0A0 370 aa15.59■□□□□ 0.09
SUPT4H1-201ENST00000225504 C2CD2LO14523 706 aa15.59■□□□□ 0.09
SUPT4H1-201ENST00000225504 SOD2P04179 222 aa15.59■□□□□ 0.09
SUPT4H1-201ENST00000225504 RBM10P98175 930 aaKnown RBP15.59■□□□□ 0.09
SUPT4H1-201ENST00000225504 ADAM9Q13443 819 aa15.59■□□□□ 0.09
SUPT4H1-201ENST00000225504 PSMD6Q15008 389 aa15.59■□□□□ 0.09
SUPT4H1-201ENST00000225504 TIGD5Q53EQ6 642 aa15.59■□□□□ 0.09
SUPT4H1-201ENST00000225504 FAM171A1Q5VUB5 890 aa15.59■□□□□ 0.09
SUPT4H1-201ENST00000225504 CEP135Q66GS9 1140 aa15.59■□□□□ 0.09
SUPT4H1-201ENST00000225504 BEST2Q8NFU1 509 aa15.59■□□□□ 0.09
SUPT4H1-201ENST00000225504 HERC2P3Q9BVR0 1158 aa15.59■□□□□ 0.09
SUPT4H1-201ENST00000225504 NGRNQ9NPE2 291 aaKnown RBP15.59■□□□□ 0.09
SUPT4H1-201ENST00000225504 CHST7Q9NS84 486 aa15.59■□□□□ 0.09
SUPT4H1-201ENST00000225504 PIRO00625 290 aa15.59■□□□□ 0.09
SUPT4H1-201ENST00000225504 SPTLC1O15269 473 aa15.59■□□□□ 0.09
SUPT4H1-201ENST00000225504 LINC01565O15544 149 aa15.59■□□□□ 0.09
SUPT4H1-201ENST00000225504 AKAP3O75969 853 aa15.59■□□□□ 0.09
SUPT4H1-201ENST00000225504 DLATP10515 647 aaKnown RBP15.59■□□□□ 0.09
SUPT4H1-201ENST00000225504 NR2F2P24468 414 aa15.59■□□□□ 0.09
SUPT4H1-201ENST00000225504 NRIP1P48552 1158 aa15.59■□□□□ 0.09
SUPT4H1-201ENST00000225504 DLG4P78352 724 aa15.59■□□□□ 0.09
SUPT4H1-201ENST00000225504 MYBPC2Q14324 1141 aa15.59■□□□□ 0.09
SUPT4H1-201ENST00000225504 SMC1AQ14683 1233 aaKnown RBP15.59■□□□□ 0.09
SUPT4H1-201ENST00000225504 PTPN14Q15678 1187 aa15.59■□□□□ 0.09
SUPT4H1-201ENST00000225504 NFIL3Q16649 462 aa15.59■□□□□ 0.09
SUPT4H1-201ENST00000225504 RTP2Q5QGT7 225 aa15.59■□□□□ 0.09
SUPT4H1-201ENST00000225504 C9orf57Q5W0N0 161 aa15.59■□□□□ 0.09
SUPT4H1-201ENST00000225504 KLHL10Q6JEL2 608 aa15.59■□□□□ 0.09
SUPT4H1-201ENST00000225504 PDE12Q6L8Q7 609 aaKnown RBP15.59■□□□□ 0.09
SUPT4H1-201ENST00000225504 PRSS55Q6UWB4 352 aaPredicted RBP15.59■□□□□ 0.09
SUPT4H1-201ENST00000225504 CEP57Q86XR8 500 aa15.59■□□□□ 0.09
SUPT4H1-201ENST00000225504 CXorf38Q8TB03 319 aa15.59■□□□□ 0.09
SUPT4H1-201ENST00000225504 DUSP9Q99956 384 aaKnown RBP15.59■□□□□ 0.09
SUPT4H1-201ENST00000225504 TLE6Q9H808 572 aa15.59■□□□□ 0.09
SUPT4H1-201ENST00000225504 INTS13Q9NVM9 706 aa15.59■□□□□ 0.09
SUPT4H1-201ENST00000225504 XPOTO43592 962 aaKnown RBP15.58■□□□□ 0.08
SUPT4H1-201ENST00000225504 CCNE1P24864 410 aa15.58■□□□□ 0.08
SUPT4H1-201ENST00000225504 CA8P35219 290 aa15.58■□□□□ 0.08
SUPT4H1-201ENST00000225504 STX17P56962 302 aa15.58■□□□□ 0.08
SUPT4H1-201ENST00000225504 DSG1Q02413 1049 aa15.58■□□□□ 0.08
SUPT4H1-201ENST00000225504 EDRF1Q3B7T1 1238 aa15.58■□□□□ 0.08
SUPT4H1-201ENST00000225504 USP41Q3LFD5 358 aa15.58■□□□□ 0.08
SUPT4H1-201ENST00000225504 CSGALNACT2Q8N6G5 542 aa15.58■□□□□ 0.08
SUPT4H1-201ENST00000225504 C1orf127Q8N9H9 656 aa15.58■□□□□ 0.08
SUPT4H1-201ENST00000225504 PARD3BQ8TEW8 1205 aa15.58■□□□□ 0.08
SUPT4H1-201ENST00000225504 PRUNE2Q8WUY3 3088 aa15.58■□□□□ 0.08
SUPT4H1-201ENST00000225504 RIN2Q8WYP3 895 aaPredicted RBP15.58■□□□□ 0.08
SUPT4H1-201ENST00000225504 DHTKD1Q96HY7 919 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms