RNA–Protein interactions for RNA: ENST00000221996.11

CRX-201, Transcript of cone-rod homeobox, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CRX, Length 4,470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-201ENST00000221996 M0QZ92 97 aa10.38□□□□□ -0.75
CRX-201ENST00000221996 RASA4O43374 803 aa10.38□□□□□ -0.75
CRX-201ENST00000221996 TROVE2P10155 538 aaKnown RBP eCLIP10.38□□□□□ -0.75
CRX-201ENST00000221996 GTF2H1P32780 548 aa10.38□□□□□ -0.75
CRX-201ENST00000221996 TGFB2P61812 414 aa10.38□□□□□ -0.75
CRX-201ENST00000221996 CUL2Q13617 745 aa10.38□□□□□ -0.75
CRX-201ENST00000221996 MXD4Q14582 209 aaPredicted RBP10.38□□□□□ -0.75
CRX-201ENST00000221996 NOP9Q86U38 636 aaKnown RBP10.38□□□□□ -0.75
CRX-201ENST00000221996 ZNF473Q8WTR7 871 aaKnown RBP10.38□□□□□ -0.75
CRX-201ENST00000221996 SREK1Q8WXA9 508 aaKnown RBP10.38□□□□□ -0.75
CRX-201ENST00000221996 LENG9Q96B70 501 aa10.38□□□□□ -0.75
CRX-201ENST00000221996 CYFIP2Q96F07 1278 aa10.38□□□□□ -0.75
CRX-201ENST00000221996 C9orf72Q96LT7 481 aa10.38□□□□□ -0.75
CRX-201ENST00000221996 MCEEQ96PE7 176 aa10.38□□□□□ -0.75
CRX-201ENST00000221996 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.38□□□□□ -0.75
CRX-201ENST00000221996 PNMA3Q9UL41 463 aa10.38□□□□□ -0.75
CRX-201ENST00000221996 NOD1Q9Y239 953 aa10.38□□□□□ -0.75
CRX-201ENST00000221996 VGLL3A8MV65 326 aa10.38□□□□□ -0.75
CRX-201ENST00000221996 RALAP11233 206 aa10.38□□□□□ -0.75
CRX-201ENST00000221996 MSH2P43246 934 aa10.38□□□□□ -0.75
CRX-201ENST00000221996 JAG1P78504 1218 aa10.38□□□□□ -0.75
CRX-201ENST00000221996 ATP11AP98196 1134 aa10.38□□□□□ -0.75
CRX-201ENST00000221996 CCDC14Q49A88 953 aa10.38□□□□□ -0.75
CRX-201ENST00000221996 PPP6R3Q5H9R7 873 aaPredicted RBP10.38□□□□□ -0.75
CRX-201ENST00000221996 OR6B3Q8NGW1 331 aa10.38□□□□□ -0.75
CRX-201ENST00000221996 INPP4AQ96PE3 977 aaPredicted RBP10.38□□□□□ -0.75
CRX-201ENST00000221996 PRDM4Q9UKN5 801 aa10.38□□□□□ -0.75
CRX-201ENST00000221996 TTLL3Q9Y4R7 772 aa10.38□□□□□ -0.75
CRX-201ENST00000221996 TUBGCP6Q96RT7 1819 aa10.38□□□□□ -0.75
CRX-201ENST00000221996 TOGARAM1Q9Y4F4 1720 aa10.38□□□□□ -0.75
CRX-201ENST00000221996 MYH14Q7Z406 1995 aaKnown RBP10.38□□□□□ -0.75
CRX-201ENST00000221996 ONECUT3O60422 494 aaPredicted RBP10.38□□□□□ -0.75
CRX-201ENST00000221996 SYF2O95926 243 aaKnown RBP10.38□□□□□ -0.75
CRX-201ENST00000221996 RRP1BQ14684 758 aaKnown RBP10.38□□□□□ -0.75
CRX-201ENST00000221996 LONRF1Q17RB8 773 aa10.38□□□□□ -0.75
CRX-201ENST00000221996 ANKRD20A3Q5VUR7 823 aa10.38□□□□□ -0.75
CRX-201ENST00000221996 VSIG10LQ86VR7 867 aa10.38□□□□□ -0.75
CRX-201ENST00000221996 SIAH1Q8IUQ4 282 aa10.38□□□□□ -0.75
CRX-201ENST00000221996 CHMP6Q96FZ7 201 aa10.38□□□□□ -0.75
CRX-201ENST00000221996 MBOAT7Q96N66 472 aa10.38□□□□□ -0.75
CRX-201ENST00000221996 SENP7Q9BQF6 1050 aa10.38□□□□□ -0.75
CRX-201ENST00000221996 GDF3Q9NR23 364 aa10.38□□□□□ -0.75
CRX-201ENST00000221996 SEPT10Q9P0V9 454 aa10.38□□□□□ -0.75
CRX-201ENST00000221996 RBAK-RBAKDNI3L0D1 243 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 LCA5LO95447 670 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 KRT3P12035 628 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 ARSEP51690 589 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 TNFAIP2Q03169 654 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 SGSM1Q2NKQ1 1148 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 ZNF677Q86XU0 584 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 PRPF31Q8WWY3 499 aaKnown RBP10.37□□□□□ -0.75
CRX-201ENST00000221996 THOC1Q96FV9 657 aaKnown RBP10.37□□□□□ -0.75
CRX-201ENST00000221996 A1CFQ9NQ94 594 aaKnown RBP10.37□□□□□ -0.75
CRX-201ENST00000221996 NWD2Q9ULI1 1742 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 WDR91A4D1P6 747 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 I3L4J1 428 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 CES2O00748 559 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 ZBTB22O15209 634 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 ADRB2P07550 413 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 NAMPTP43490 491 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 PTENP60484 403 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 CNTN2Q02246 1040 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 KYNUQ16719 465 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 UGCGQ16739 394 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 FAM102AQ5T9C2 384 aaPredicted RBP10.37□□□□□ -0.75
CRX-201ENST00000221996 AGBL2Q5U5Z8 902 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 GPAT2Q6NUI2 795 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 SLC9A9Q8IVB4 645 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 MAP4K3Q8IVH8 894 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 NME8Q8N427 588 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 SNX25Q9H3E2 840 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 FRMD3A2A2Y4 597 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 PHF20L1A8MW92 1017 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 ITIH2P19823 946 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 BRD2P25440 801 aaKnown RBP10.37□□□□□ -0.75
CRX-201ENST00000221996 GTF2BQ00403 316 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 SPIRE1Q08AE8 756 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 IER5Q5VY09 327 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 FAM47EQ6ZV65 393 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 MDM1Q8TC05 714 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 SPIRE2Q8WWL2 714 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 KRT35Q92764 455 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 UBR2Q8IWV8 1755 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 PIK3R2O00459 728 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 KRT7P08729 469 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 CHN1P15882 459 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 SARNPP82979 210 aaKnown RBP10.37□□□□□ -0.75
CRX-201ENST00000221996 KCNV1Q6PIU1 500 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 CCDC60Q8IWA6 550 aaPredicted RBP10.37□□□□□ -0.75
CRX-201ENST00000221996 CCDC110Q8TBZ0 833 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 EPS8L1Q8TE68 723 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 TRAIPQ9BWF2 469 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 PABPC3Q9H361 631 aaKnown RBP10.37□□□□□ -0.75
CRX-201ENST00000221996 HEY1Q9Y5J3 304 aa10.37□□□□□ -0.75
CRX-201ENST00000221996 ZBED1O96006 694 aa10.36□□□□□ -0.75
CRX-201ENST00000221996 CALCAP01258 141 aa10.36□□□□□ -0.75
CRX-201ENST00000221996 PGK2P07205 417 aa10.36□□□□□ -0.75
CRX-201ENST00000221996 PTPRAP18433 802 aa10.36□□□□□ -0.75
CRX-201ENST00000221996 HSPA9P38646 679 aaKnown RBP10.36□□□□□ -0.75
CRX-201ENST00000221996 HSD17B4P51659 736 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms