RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 PLEKP08567 350 aaPredicted RBP14.47□□□□□ -0.09
GABPB1-201ENST00000220429 GSTT2P0CG29 244 aa14.47□□□□□ -0.09
GABPB1-201ENST00000220429 GSTT2BP0CG30 244 aa14.47□□□□□ -0.09
GABPB1-201ENST00000220429 ARPC4P59998 168 aa14.47□□□□□ -0.09
GABPB1-201ENST00000220429 BCL2A1Q16548 175 aa14.47□□□□□ -0.09
GABPB1-201ENST00000220429 CATSPER3Q86XQ3 398 aa14.47□□□□□ -0.09
GABPB1-201ENST00000220429 USP38Q8NB14 1042 aa14.47□□□□□ -0.09
GABPB1-201ENST00000220429 GMLQ99445 158 aa14.47□□□□□ -0.09
GABPB1-201ENST00000220429 TSG101Q99816 390 aa14.47□□□□□ -0.09
GABPB1-201ENST00000220429 TMOD2Q9NZR1 351 aa14.47□□□□□ -0.09
GABPB1-201ENST00000220429 KIAA1522Q9P206 1035 aaPredicted RBP14.47□□□□□ -0.09
GABPB1-201ENST00000220429 TDRKHQ9Y2W6 561 aaKnown RBP14.47□□□□□ -0.09
GABPB1-201ENST00000220429 MYPNQ86TC9 1320 aa14.47□□□□□ -0.09
GABPB1-201ENST00000220429 KIF13BQ9NQT8 1826 aa14.47□□□□□ -0.09
GABPB1-201ENST00000220429 SMIM23A6NLE4 172 aa14.47□□□□□ -0.09
GABPB1-201ENST00000220429 TBX3O15119 743 aa14.47□□□□□ -0.09
GABPB1-201ENST00000220429 SLC12A3P55017 1021 aa14.47□□□□□ -0.09
GABPB1-201ENST00000220429 CNGA2Q16280 664 aa14.47□□□□□ -0.09
GABPB1-201ENST00000220429 KHDC1Q4VXA5 237 aaKnown RBP14.47□□□□□ -0.09
GABPB1-201ENST00000220429 ARSHQ5FYA8 562 aa14.47□□□□□ -0.09
GABPB1-201ENST00000220429 RNF43Q68DV7 783 aa14.47□□□□□ -0.09
GABPB1-201ENST00000220429 ANKRD13CQ8N6S4 541 aa14.47□□□□□ -0.09
GABPB1-201ENST00000220429 FAM133AQ8N9E0 248 aa14.47□□□□□ -0.09
GABPB1-201ENST00000220429 ANKLE1Q8NAG6 615 aa14.47□□□□□ -0.09
GABPB1-201ENST00000220429 INPP4AQ96PE3 977 aaPredicted RBP14.47□□□□□ -0.09
GABPB1-201ENST00000220429 ZNF184Q99676 751 aaPredicted RBP14.47□□□□□ -0.09
GABPB1-201ENST00000220429 DDX43Q9NXZ2 648 aaKnown RBP14.47□□□□□ -0.09
GABPB1-201ENST00000220429 PTTG2Q9NZH5 202 aa14.47□□□□□ -0.09
GABPB1-201ENST00000220429 ZNF70Q9UC06 446 aaPredicted RBP14.47□□□□□ -0.09
GABPB1-201ENST00000220429 MAP3K7O43318 606 aa14.46□□□□□ -0.09
GABPB1-201ENST00000220429 BUB1O43683 1085 aa14.46□□□□□ -0.09
GABPB1-201ENST00000220429 IFI35P80217 286 aaPredicted RBP14.46□□□□□ -0.09
GABPB1-201ENST00000220429 GIT2Q14161 759 aa14.46□□□□□ -0.09
GABPB1-201ENST00000220429 WDR72Q3MJ13 1102 aa14.46□□□□□ -0.09
GABPB1-201ENST00000220429 ST13P4Q8IZP2 240 aaPredicted RBP14.46□□□□□ -0.09
GABPB1-201ENST00000220429 CYP2W1Q8TAV3 490 aa14.46□□□□□ -0.09
GABPB1-201ENST00000220429 BHMTQ93088 406 aa14.46□□□□□ -0.09
GABPB1-201ENST00000220429 FAM207AQ9NSI2 230 aaPredicted RBP14.46□□□□□ -0.09
GABPB1-201ENST00000220429 FAIMQ9NVQ4 179 aa14.46□□□□□ -0.09
GABPB1-201ENST00000220429 RASAL2Q9UJF2 1139 aa14.46□□□□□ -0.09
GABPB1-201ENST00000220429 TMEM59LQ9UK28 342 aa14.46□□□□□ -0.09
GABPB1-201ENST00000220429 FRMD4BQ9Y2L6 1034 aa14.46□□□□□ -0.09
GABPB1-201ENST00000220429 CNTNAP1P78357 1384 aa14.46□□□□□ -0.09
GABPB1-201ENST00000220429 TLDC2A0PJX2 215 aa14.46□□□□□ -0.09
GABPB1-201ENST00000220429 MSH4O15457 936 aa14.46□□□□□ -0.09
GABPB1-201ENST00000220429 RGS16O15492 202 aaPredicted RBP14.46□□□□□ -0.09
GABPB1-201ENST00000220429 SPATA31C1P0DKV0 1188 aa14.46□□□□□ -0.09
GABPB1-201ENST00000220429 EPHB2P29323 1055 aa14.46□□□□□ -0.09
GABPB1-201ENST00000220429 CIITAP33076 1130 aa14.46□□□□□ -0.09
GABPB1-201ENST00000220429 PSMC6P62333 389 aa14.46□□□□□ -0.09
GABPB1-201ENST00000220429 MGAT5Q09328 741 aa14.46□□□□□ -0.09
GABPB1-201ENST00000220429 AP1B1Q10567 949 aa14.46□□□□□ -0.09
GABPB1-201ENST00000220429 INAQ16352 499 aa14.46□□□□□ -0.09
GABPB1-201ENST00000220429 HS2ST1Q7LGA3 356 aa14.46□□□□□ -0.09
GABPB1-201ENST00000220429 VSIG1Q86XK7 387 aa14.46□□□□□ -0.09
GABPB1-201ENST00000220429 CDAN1Q8IWY9 1227 aa14.46□□□□□ -0.09
GABPB1-201ENST00000220429 FAM151AQ8WW52 585 aa14.46□□□□□ -0.09
GABPB1-201ENST00000220429 KANSL1LA0AUZ9 987 aa14.45□□□□□ -0.1
GABPB1-201ENST00000220429 CCDC169A6NNP5 214 aa14.45□□□□□ -0.1
GABPB1-201ENST00000220429 BHMG1C9JSJ3 638 aaPredicted RBP14.45□□□□□ -0.1
GABPB1-201ENST00000220429 CDK4P11802 303 aa14.45□□□□□ -0.1
GABPB1-201ENST00000220429 RGS2P41220 211 aa14.45□□□□□ -0.1
GABPB1-201ENST00000220429 STAT2P52630 851 aa14.45□□□□□ -0.1
GABPB1-201ENST00000220429 KIF11P52732 1056 aa14.45□□□□□ -0.1
GABPB1-201ENST00000220429 EMP3P54852 163 aa14.45□□□□□ -0.1
GABPB1-201ENST00000220429 FKBP3Q00688 224 aaKnown RBP14.45□□□□□ -0.1
GABPB1-201ENST00000220429 DCTN2Q13561 401 aaKnown RBP14.45□□□□□ -0.1
GABPB1-201ENST00000220429 DLGAP5Q15398 846 aa14.45□□□□□ -0.1
GABPB1-201ENST00000220429 EAPPQ56P03 285 aaPredicted RBP14.45□□□□□ -0.1
GABPB1-201ENST00000220429 HERC4Q5GLZ8 1057 aaPredicted RBP14.45□□□□□ -0.1
GABPB1-201ENST00000220429 TRIM67Q6ZTA4 783 aa14.45□□□□□ -0.1
GABPB1-201ENST00000220429 C3orf62Q6ZUJ4 267 aa14.45□□□□□ -0.1
GABPB1-201ENST00000220429 TREML1Q86YW5 311 aa14.45□□□□□ -0.1
GABPB1-201ENST00000220429 TTLL6Q8N841 843 aa14.45□□□□□ -0.1
GABPB1-201ENST00000220429 SCFD1Q8WVM8 642 aa14.45□□□□□ -0.1
GABPB1-201ENST00000220429 ATP6V0A1Q93050 837 aa14.45□□□□□ -0.1
GABPB1-201ENST00000220429 ZNF277Q9NRM2 450 aaPredicted RBP14.45□□□□□ -0.1
GABPB1-201ENST00000220429 METTL5Q9NRN9 209 aaKnown RBP14.45□□□□□ -0.1
GABPB1-201ENST00000220429 HAO1Q9UJM8 370 aa14.45□□□□□ -0.1
GABPB1-201ENST00000220429 TMX2Q9Y320 296 aa14.45□□□□□ -0.1
GABPB1-201ENST00000220429 TRAF5O00463 557 aa14.45□□□□□ -0.1
GABPB1-201ENST00000220429 MEIS1O00470 390 aa14.45□□□□□ -0.1
GABPB1-201ENST00000220429 DAPK3O43293 454 aa14.45□□□□□ -0.1
GABPB1-201ENST00000220429 TARSP26639 723 aaKnown RBP14.45□□□□□ -0.1
GABPB1-201ENST00000220429 RPA1P27694 616 aa14.45□□□□□ -0.1
GABPB1-201ENST00000220429 HNRNPH3P31942 346 aaKnown RBP14.45□□□□□ -0.1
GABPB1-201ENST00000220429 PMS2P54278 862 aa14.45□□□□□ -0.1
GABPB1-201ENST00000220429 SLC34A1Q06495 639 aa14.45□□□□□ -0.1
GABPB1-201ENST00000220429 KRT72Q14CN4 511 aa14.45□□□□□ -0.1
GABPB1-201ENST00000220429 SPDYCQ5MJ68 293 aa14.45□□□□□ -0.1
GABPB1-201ENST00000220429 FAM83BQ5T0W9 1011 aa14.45□□□□□ -0.1
GABPB1-201ENST00000220429 LRRC8BQ6P9F7 803 aa14.45□□□□□ -0.1
GABPB1-201ENST00000220429 NELFCDQ8IXH7 590 aa14.45□□□□□ -0.1
GABPB1-201ENST00000220429 PEX5LQ8IYB4 626 aa14.45□□□□□ -0.1
GABPB1-201ENST00000220429 SREK1Q8WXA9 508 aaKnown RBP14.45□□□□□ -0.1
GABPB1-201ENST00000220429 AZI2Q9H6S1 392 aa14.45□□□□□ -0.1
GABPB1-201ENST00000220429 MMRN2Q9H8L6 949 aa14.45□□□□□ -0.1
GABPB1-201ENST00000220429 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.45□□□□□ -0.1
GABPB1-201ENST00000220429 ZBTB21Q9ULJ3 1066 aa14.45□□□□□ -0.1
GABPB1-201ENST00000220429 PLAGL2Q9UPG8 496 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms