RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 IREB2P48200 963 aaKnown RBP13.12□□□□□ -0.31
TM9SF4-201ENST00000217315 ARSEP51690 589 aa13.12□□□□□ -0.31
TM9SF4-201ENST00000217315 GRM1Q13255 1194 aa13.12□□□□□ -0.31
TM9SF4-201ENST00000217315 SNCBQ16143 134 aa13.12□□□□□ -0.31
TM9SF4-201ENST00000217315 LGSNQ5TDP6 509 aa13.12□□□□□ -0.31
TM9SF4-201ENST00000217315 C6orf163Q5TEZ5 329 aa13.12□□□□□ -0.31
TM9SF4-201ENST00000217315 XRRA1Q6P2D8 792 aa13.12□□□□□ -0.31
TM9SF4-201ENST00000217315 DPP9Q86TI2 863 aa13.12□□□□□ -0.31
TM9SF4-201ENST00000217315 SIAH1Q8IUQ4 282 aa13.12□□□□□ -0.31
TM9SF4-201ENST00000217315 RDM1Q8NG50 284 aa13.12□□□□□ -0.31
TM9SF4-201ENST00000217315 EPS8L1Q8TE68 723 aa13.12□□□□□ -0.31
TM9SF4-201ENST00000217315 SEPT1Q8WYJ6 367 aa13.12□□□□□ -0.31
TM9SF4-201ENST00000217315 SPATA33Q96N06 139 aa13.12□□□□□ -0.31
TM9SF4-201ENST00000217315 MCEEQ96PE7 176 aa13.12□□□□□ -0.31
TM9SF4-201ENST00000217315 SPIRE1Q08AE8 756 aa13.12□□□□□ -0.31
TM9SF4-201ENST00000217315 NAA25Q14CX7 972 aa13.12□□□□□ -0.31
TM9SF4-201ENST00000217315 ASTE1Q2TB18 679 aaPredicted RBP13.12□□□□□ -0.31
TM9SF4-201ENST00000217315 ACSF2Q96CM8 615 aaPredicted RBP13.12□□□□□ -0.31
TM9SF4-201ENST00000217315 FAM49AQ9H0Q0 323 aaPredicted RBP13.12□□□□□ -0.31
TM9SF4-201ENST00000217315 MSH2P43246 934 aa13.11□□□□□ -0.31
TM9SF4-201ENST00000217315 MARCKSL1P49006 195 aa13.11□□□□□ -0.31
TM9SF4-201ENST00000217315 CAV1Q03135 178 aa13.11□□□□□ -0.31
TM9SF4-201ENST00000217315 ZNF844Q08AG5 666 aa13.11□□□□□ -0.31
TM9SF4-201ENST00000217315 ITGB3BPQ13352 177 aaPredicted RBP13.11□□□□□ -0.31
TM9SF4-201ENST00000217315 TMC3Q7Z5M5 1100 aa13.11□□□□□ -0.31
TM9SF4-201ENST00000217315 PITPNM3Q9BZ71 974 aa13.11□□□□□ -0.31
TM9SF4-201ENST00000217315 SLC38A10Q9HBR0 1119 aa13.11□□□□□ -0.31
TM9SF4-201ENST00000217315 GINM1Q9NU53 330 aa13.11□□□□□ -0.31
TM9SF4-201ENST00000217315 SYNPO2Q9UMS6 1093 aa13.11□□□□□ -0.31
TM9SF4-201ENST00000217315 PCDHA2Q9Y5H9 948 aa13.11□□□□□ -0.31
TM9SF4-201ENST00000217315 CES2O00748 559 aa13.11□□□□□ -0.31
TM9SF4-201ENST00000217315 PRPSAP2O60256 369 aa13.11□□□□□ -0.31
TM9SF4-201ENST00000217315 AGTP01019 485 aa13.11□□□□□ -0.31
TM9SF4-201ENST00000217315 ADRB2P07550 413 aa13.11□□□□□ -0.31
TM9SF4-201ENST00000217315 ITIH2P19823 946 aa13.11□□□□□ -0.31
TM9SF4-201ENST00000217315 GTF2H1P32780 548 aa13.11□□□□□ -0.31
TM9SF4-201ENST00000217315 ITGA8P53708 1063 aa13.11□□□□□ -0.31
TM9SF4-201ENST00000217315 RRP1BQ14684 758 aaKnown RBP13.11□□□□□ -0.31
TM9SF4-201ENST00000217315 PPP6R3Q5H9R7 873 aaPredicted RBP13.11□□□□□ -0.31
TM9SF4-201ENST00000217315 PALB2Q86YC2 1186 aa13.11□□□□□ -0.31
TM9SF4-201ENST00000217315 ZBED8Q8IZ13 594 aa13.11□□□□□ -0.31
TM9SF4-201ENST00000217315 EPS8L3Q8TE67 593 aaKnown RBP13.11□□□□□ -0.31
TM9SF4-201ENST00000217315 RBM15Q96T37 977 aaKnown RBP eCLIP13.11□□□□□ -0.312e-6■■□□□ 14.3
TM9SF4-201ENST00000217315 MIS12Q9H081 205 aa13.11□□□□□ -0.31
TM9SF4-201ENST00000217315 FRMD3A2A2Y4 597 aa13.11□□□□□ -0.31
TM9SF4-201ENST00000217315 PIK3R2O00459 728 aa13.11□□□□□ -0.31
TM9SF4-201ENST00000217315 OATP04181 439 aa13.11□□□□□ -0.31
TM9SF4-201ENST00000217315 EFNA5P52803 228 aa13.11□□□□□ -0.31
TM9SF4-201ENST00000217315 P3H1Q32P28 736 aa13.11□□□□□ -0.31
TM9SF4-201ENST00000217315 EPM2AIP1Q7L775 607 aaPredicted RBP13.11□□□□□ -0.31
TM9SF4-201ENST00000217315 EXOC8Q8IYI6 725 aa13.11□□□□□ -0.31
TM9SF4-201ENST00000217315 TRAIPQ9BWF2 469 aa13.11□□□□□ -0.31
TM9SF4-201ENST00000217315 STRCP1A6NGW2 1772 aa13.11□□□□□ -0.31
TM9SF4-201ENST00000217315 CUL2Q13617 745 aa13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 UGCGQ16739 394 aa13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 FKBP1CQ5VVH2 108 aa13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 DPY19L2Q6NUT2 758 aa13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 TEX2Q8IWB9 1127 aa13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 TMC2Q8TDI7 906 aa13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 SEC16BQ96JE7 1060 aa13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 TSNARE1Q96NA8 513 aa13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 SPAG7O75391 227 aa13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 MAPTP10636 758 aaKnown RBP13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 PDIA2Q13087 525 aaKnown RBP13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 ZNF354CQ86Y25 554 aa13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 ALG3Q92685 438 aa13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 MCUR1Q96AQ8 359 aa13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 RSRC1Q96IZ7 334 aaKnown RBP13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 MBOAT7Q96N66 472 aa13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 SENP7Q9BQF6 1050 aa13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 HEY1Q9Y5J3 304 aa13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 TCP11X1B4DZS4 312 aa13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 KRT3P12035 628 aa13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 GARTP22102 1010 aa13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 BRD2P25440 801 aaKnown RBP13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 C11orf63Q6NUN7 778 aa13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 PAXIP1Q6ZW49 1069 aaPredicted RBP13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 TRMT10CQ7L0Y3 403 aaKnown RBP13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 NIPA1Q7RTP0 329 aa13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 VPS52Q8N1B4 723 aa13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 SCFD2Q8WU76 684 aa13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 RNF34Q969K3 372 aa13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 ZBTB45Q96K62 511 aaPredicted RBP13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 MAP3K20Q9NYL2 800 aaKnown RBP13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 AJAP1Q9UKB5 411 aaPredicted RBP13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 TTLL3Q9Y4R7 772 aa13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 I3L4J1 428 aa13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 KIAA0391O15091 583 aaKnown RBP13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 KRT10P13645 584 aa13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 OSBPP22059 807 aa13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 GPAT2Q6NUI2 795 aa13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 SLC9A9Q8IVB4 645 aa13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 RAPGEF5Q92565 580 aa13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 ELP3Q9H9T3 547 aa13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 STRIP2Q9ULQ0 834 aa13.1□□□□□ -0.31
TM9SF4-201ENST00000217315 KLRG2A4D1S0 409 aaPredicted RBP13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 A6NJR5 290 aa13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 M0QYV0 167 aa13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 SUPT20HL2P0C7V6 817 aa13.09□□□□□ -0.31
TM9SF4-201ENST00000217315 RARAP10276 462 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms