RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 ATOH1Q92858 354 aaPredicted RBP24.18■■□□□ 1.46
VTI1B-201ENST00000216456 FGF14Q92915 247 aa24.18■■□□□ 1.46
VTI1B-201ENST00000216456 FOXD4L1Q9NU39 408 aa24.18■■□□□ 1.46
VTI1B-201ENST00000216456 SLC38A7Q9NVC3 462 aa24.18■■□□□ 1.46
VTI1B-201ENST00000216456 CACNA1HO95180 2353 aa24.18■■□□□ 1.46
VTI1B-201ENST00000216456 MYH11P35749 1972 aa24.18■■□□□ 1.46
VTI1B-201ENST00000216456 HNRNPA1P09651 372 aaKnown RBP eCLIP24.17■■□□□ 1.46
VTI1B-201ENST00000216456 MARCKSP29966 332 aaPredicted RBP24.17■■□□□ 1.46
VTI1B-201ENST00000216456 ROR1Q01973 937 aa24.17■■□□□ 1.46
VTI1B-201ENST00000216456 MYCT1Q8N699 235 aa24.17■■□□□ 1.46
VTI1B-201ENST00000216456 GPR152Q8TDT2 470 aa24.17■■□□□ 1.46
VTI1B-201ENST00000216456 ING5Q8WYH8 240 aa24.17■■□□□ 1.46
VTI1B-201ENST00000216456 RAD54LQ92698 747 aa24.17■■□□□ 1.46
VTI1B-201ENST00000216456 BICD1Q96G01 975 aa24.17■■□□□ 1.46
VTI1B-201ENST00000216456 CALML4Q96GE6 196 aa24.17■■□□□ 1.46
VTI1B-201ENST00000216456 EPSTI1Q96J88 318 aa24.17■■□□□ 1.46
VTI1B-201ENST00000216456 AK8Q96MA6 479 aa24.17■■□□□ 1.46
VTI1B-201ENST00000216456 PRRX2Q99811 253 aa24.17■■□□□ 1.46
VTI1B-201ENST00000216456 IKZF4Q9H2S9 585 aa24.17■■□□□ 1.46
VTI1B-201ENST00000216456 ZHX3Q9H4I2 956 aa24.17■■□□□ 1.46
VTI1B-201ENST00000216456 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.17■■□□□ 1.46
VTI1B-201ENST00000216456 BACE2Q9Y5Z0 518 aa24.17■■□□□ 1.46
VTI1B-201ENST00000216456 COL4A3Q01955 1670 aa24.17■■□□□ 1.46
VTI1B-201ENST00000216456 DMDP11532 3685 aa24.16■■□□□ 1.46
VTI1B-201ENST00000216456 WDR27A2RRH5 827 aa24.16■■□□□ 1.46
VTI1B-201ENST00000216456 TISP43B9A030 160 aa24.16■■□□□ 1.46
VTI1B-201ENST00000216456 ANHXE9PGG2 379 aa24.16■■□□□ 1.46
VTI1B-201ENST00000216456 NRG2O14511 850 aaPredicted RBP24.16■■□□□ 1.46
VTI1B-201ENST00000216456 CLDN3O15551 220 aa24.16■■□□□ 1.46
VTI1B-201ENST00000216456 SLC39A4Q6P5W5 647 aa24.16■■□□□ 1.46
VTI1B-201ENST00000216456 PDXDC1Q6P996 788 aa24.16■■□□□ 1.46
VTI1B-201ENST00000216456 ZPBP2Q6X784 338 aa24.16■■□□□ 1.46
VTI1B-201ENST00000216456 ANKS3Q6ZW76 656 aa24.16■■□□□ 1.46
VTI1B-201ENST00000216456 BRAPQ7Z569 592 aa24.16■■□□□ 1.46
VTI1B-201ENST00000216456 FGF13Q92913 245 aa24.16■■□□□ 1.46
VTI1B-201ENST00000216456 FIZ1Q96SL8 496 aa24.16■■□□□ 1.46
VTI1B-201ENST00000216456 KCND2Q9NZV8 630 aa24.16■■□□□ 1.46
VTI1B-201ENST00000216456 LARSQ9P2J5 1176 aaKnown RBP24.16■■□□□ 1.46
VTI1B-201ENST00000216456 NUB1Q9Y5A7 615 aa24.16■■□□□ 1.46
VTI1B-201ENST00000216456 NOTCH4Q99466 2003 aa24.16■■□□□ 1.46
VTI1B-201ENST00000216456 CITO14578 2027 aa24.15■■□□□ 1.46
VTI1B-201ENST00000216456 K7ENM7 598 aa24.15■■□□□ 1.46
VTI1B-201ENST00000216456 TRAPPC3O43617 180 aa24.15■■□□□ 1.46
VTI1B-201ENST00000216456 TBC1D4O60343 1298 aa24.15■■□□□ 1.46
VTI1B-201ENST00000216456 FAM13AO94988 1023 aa24.15■■□□□ 1.46
VTI1B-201ENST00000216456 SEC24AO95486 1093 aa24.15■■□□□ 1.46
VTI1B-201ENST00000216456 NMT1P30419 496 aaKnown RBP24.15■■□□□ 1.46
VTI1B-201ENST00000216456 PTPAQ15257 358 aa24.15■■□□□ 1.46
VTI1B-201ENST00000216456 SLC5A9Q2M3M2 681 aa24.15■■□□□ 1.46
VTI1B-201ENST00000216456 FBXL5Q9UKA1 691 aa24.15■■□□□ 1.46
VTI1B-201ENST00000216456 CDH7Q9ULB5 785 aa24.15■■□□□ 1.46
VTI1B-201ENST00000216456 TBX20Q9UMR3 447 aa24.15■■□□□ 1.46
VTI1B-201ENST00000216456 TIMM13Q9Y5L4 95 aaPredicted RBP24.15■■□□□ 1.46
VTI1B-201ENST00000216456 LACTBL1A8MY62 500 aa24.14■■□□□ 1.45
VTI1B-201ENST00000216456 PPEF2O14830 753 aa24.14■■□□□ 1.45
VTI1B-201ENST00000216456 FAM189A1O60320 539 aa24.14■■□□□ 1.45
VTI1B-201ENST00000216456 SRFP11831 508 aa24.14■■□□□ 1.45
VTI1B-201ENST00000216456 AOC1P19801 751 aa24.14■■□□□ 1.45
VTI1B-201ENST00000216456 HOXA9P31269 272 aa24.14■■□□□ 1.45
VTI1B-201ENST00000216456 MCM4P33991 863 aa24.14■■□□□ 1.45
VTI1B-201ENST00000216456 CLCN5P51795 746 aa24.14■■□□□ 1.45
VTI1B-201ENST00000216456 ZNF131P52739 623 aa24.14■■□□□ 1.45
VTI1B-201ENST00000216456 CEBPZQ03701 1054 aaKnown RBP24.14■■□□□ 1.45
VTI1B-201ENST00000216456 RESTQ13127 1097 aa24.14■■□□□ 1.45
VTI1B-201ENST00000216456 ZC2HC1CQ53FD0 456 aaPredicted RBP24.14■■□□□ 1.45
VTI1B-201ENST00000216456 SLC8B1Q6J4K2 584 aa24.14■■□□□ 1.45
VTI1B-201ENST00000216456 RASSF8Q8NHQ8 419 aa24.14■■□□□ 1.45
VTI1B-201ENST00000216456 CLIC6Q96NY7 704 aa24.14■■□□□ 1.45
VTI1B-201ENST00000216456 ODF2LQ9ULJ1 636 aa24.14■■□□□ 1.45
VTI1B-201ENST00000216456 VPS13AQ96RL7 3174 aa24.14■■□□□ 1.45
VTI1B-201ENST00000216456 TTC26A0AVF1 554 aa24.13■■□□□ 1.45
VTI1B-201ENST00000216456 XYLBO75191 536 aa24.13■■□□□ 1.45
VTI1B-201ENST00000216456 KRT18P05783 430 aaKnown RBP24.13■■□□□ 1.45
VTI1B-201ENST00000216456 RPL9P32969 192 aaKnown RBP24.13■■□□□ 1.45
VTI1B-201ENST00000216456 LONP1P36776 959 aaKnown RBP24.13■■□□□ 1.45
VTI1B-201ENST00000216456 LIG4P49917 911 aa24.13■■□□□ 1.45
VTI1B-201ENST00000216456 MRPL58Q14197 206 aaKnown RBP24.13■■□□□ 1.45
VTI1B-201ENST00000216456 ENOX2Q16206 610 aaKnown RBP24.13■■□□□ 1.45
VTI1B-201ENST00000216456 KCTD17Q8N5Z5 321 aa24.13■■□□□ 1.45
VTI1B-201ENST00000216456 KIF12Q96FN5 646 aa24.13■■□□□ 1.45
VTI1B-201ENST00000216456 SUSD3Q96L08 255 aa24.13■■□□□ 1.45
VTI1B-201ENST00000216456 ANKRD63C9JTQ0 380 aa24.12■■□□□ 1.45
VTI1B-201ENST00000216456 STK25O00506 426 aa24.12■■□□□ 1.45
VTI1B-201ENST00000216456 HNRNPDLO14979 420 aaKnown RBP24.12■■□□□ 1.45
VTI1B-201ENST00000216456 TRAK2O60296 914 aa24.12■■□□□ 1.45
VTI1B-201ENST00000216456 ABLIM3O94929 683 aa24.12■■□□□ 1.45
VTI1B-201ENST00000216456 CLTAP09496 248 aa24.12■■□□□ 1.45
VTI1B-201ENST00000216456 GPC5P78333 572 aa24.12■■□□□ 1.45
VTI1B-201ENST00000216456 CTXN3Q4LDR2 81 aa24.12■■□□□ 1.45
VTI1B-201ENST00000216456 PABPC1LQ4VXU2 614 aaKnown RBP24.12■■□□□ 1.45
VTI1B-201ENST00000216456 NPAS3Q8IXF0 933 aa24.12■■□□□ 1.45
VTI1B-201ENST00000216456 ZNF461Q8TAF7 563 aa24.12■■□□□ 1.45
VTI1B-201ENST00000216456 LARP4BQ92615 738 aaKnown RBP24.12■■□□□ 1.45
VTI1B-201ENST00000216456 DDX12PQ92771 950 aa24.12■■□□□ 1.45
VTI1B-201ENST00000216456 KXD1Q9BQD3 176 aa24.12■■□□□ 1.45
VTI1B-201ENST00000216456 PARVGQ9HBI0 331 aa24.12■■□□□ 1.45
VTI1B-201ENST00000216456 WNT16Q9UBV4 365 aa24.12■■□□□ 1.45
VTI1B-201ENST00000216456 FBXO2Q9UK22 296 aaPredicted RBP24.12■■□□□ 1.45
VTI1B-201ENST00000216456 PDCD11Q14690 1871 aaKnown RBP24.12■■□□□ 1.45
VTI1B-201ENST00000216456 SYN3O14994 580 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms