RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 ADAM2Q99965 735 aa17.18■□□□□ 0.34
SNRPD3-201ENST00000215829 IFIH1Q9BYX4 1025 aaKnown RBP17.18■□□□□ 0.34
SNRPD3-201ENST00000215829 MCOLN1Q9GZU1 580 aa17.18■□□□□ 0.34
SNRPD3-201ENST00000215829 CXCL16Q9H2A7 254 aa17.18■□□□□ 0.34
SNRPD3-201ENST00000215829 A0A0U1RQF3 1178 aa17.17■□□□□ 0.34
SNRPD3-201ENST00000215829 SOWAHDA6NJG2 315 aa17.17■□□□□ 0.34
SNRPD3-201ENST00000215829 F8VZ95 297 aa17.17■□□□□ 0.34
SNRPD3-201ENST00000215829 STAT1P42224 750 aa17.17■□□□□ 0.34
SNRPD3-201ENST00000215829 MFAP3P55082 362 aa17.17■□□□□ 0.34
SNRPD3-201ENST00000215829 ZBTB6Q15916 424 aa17.17■□□□□ 0.34
SNRPD3-201ENST00000215829 SGSM1Q2NKQ1 1148 aa17.17■□□□□ 0.34
SNRPD3-201ENST00000215829 KIAA1524Q8TCG1 905 aa17.17■□□□□ 0.34
SNRPD3-201ENST00000215829 GPR88Q9GZN0 384 aa17.17■□□□□ 0.34
SNRPD3-201ENST00000215829 C1orf112Q9NSG2 853 aa17.17■□□□□ 0.34
SNRPD3-201ENST00000215829 KLK14Q9P0G3 267 aa17.17■□□□□ 0.34
SNRPD3-201ENST00000215829 NBNO60934 754 aa17.17■□□□□ 0.34
SNRPD3-201ENST00000215829 ASS1P00966 412 aaKnown RBP17.17■□□□□ 0.34
SNRPD3-201ENST00000215829 SKIP12755 728 aa17.17■□□□□ 0.34
SNRPD3-201ENST00000215829 ITGA4P13612 1032 aa17.17■□□□□ 0.34
SNRPD3-201ENST00000215829 KCNE1P15382 129 aa17.17■□□□□ 0.34
SNRPD3-201ENST00000215829 KCNJ6P48051 423 aa17.17■□□□□ 0.34
SNRPD3-201ENST00000215829 MYL6P60660 151 aa17.17■□□□□ 0.34
SNRPD3-201ENST00000215829 GCNT1Q02742 428 aa17.17■□□□□ 0.34
SNRPD3-201ENST00000215829 GPNMBQ14956 572 aa17.17■□□□□ 0.34
SNRPD3-201ENST00000215829 ARHGAP44Q17R89 818 aa17.17■□□□□ 0.34
SNRPD3-201ENST00000215829 ENOSF1Q7L5Y1 443 aa17.17■□□□□ 0.34
SNRPD3-201ENST00000215829 NECAB2Q7Z6G3 386 aa17.17■□□□□ 0.34
SNRPD3-201ENST00000215829 FMNL3Q8IVF7 1028 aa17.17■□□□□ 0.34
SNRPD3-201ENST00000215829 CXorf38Q8TB03 319 aa17.17■□□□□ 0.34
SNRPD3-201ENST00000215829 KAT5Q92993 513 aa17.17■□□□□ 0.34
SNRPD3-201ENST00000215829 KREMEN1Q96MU8 473 aa17.17■□□□□ 0.34
SNRPD3-201ENST00000215829 IMPG2Q9BZV3 1241 aa17.17■□□□□ 0.34
SNRPD3-201ENST00000215829 HIPK3Q9H422 1215 aa17.17■□□□□ 0.34
SNRPD3-201ENST00000215829 APOBEC3GQ9HC16 384 aaKnown RBP17.17■□□□□ 0.34
SNRPD3-201ENST00000215829 RGS18Q9NS28 235 aa17.17■□□□□ 0.34
SNRPD3-201ENST00000215829 DPP3Q9NY33 737 aa17.17■□□□□ 0.34
SNRPD3-201ENST00000215829 SIX4Q9UIU6 781 aa17.17■□□□□ 0.34
SNRPD3-201ENST00000215829 KIAA0100Q14667 2235 aaKnown RBP17.16■□□□□ 0.34
SNRPD3-201ENST00000215829 SMIM28A0A1B0GU29 152 aa17.16■□□□□ 0.34
SNRPD3-201ENST00000215829 ESPNB1AK53 854 aa17.16■□□□□ 0.34
SNRPD3-201ENST00000215829 FOXN3O00409 490 aaPredicted RBP17.16■□□□□ 0.34
SNRPD3-201ENST00000215829 MSNP26038 577 aaKnown RBP17.16■□□□□ 0.34
SNRPD3-201ENST00000215829 SOX5P35711 763 aa17.16■□□□□ 0.34
SNRPD3-201ENST00000215829 NOP14P78316 857 aaKnown RBP17.16■□□□□ 0.34
SNRPD3-201ENST00000215829 ASIC2Q16515 512 aa17.16■□□□□ 0.34
SNRPD3-201ENST00000215829 HGSNATQ68CP4 663 aa17.16■□□□□ 0.34
SNRPD3-201ENST00000215829 SPOPLQ6IQ16 392 aa17.16■□□□□ 0.34
SNRPD3-201ENST00000215829 RAD9BQ6WBX8 426 aa17.16■□□□□ 0.34
SNRPD3-201ENST00000215829 FAM43BQ6ZT52 329 aaPredicted RBP17.16■□□□□ 0.34
SNRPD3-201ENST00000215829 IRF2BP2Q7Z5L9 587 aa17.16■□□□□ 0.34
SNRPD3-201ENST00000215829 ELMO3Q96BJ8 720 aa17.16■□□□□ 0.34
SNRPD3-201ENST00000215829 FTHL17Q9BXU8 183 aa17.16■□□□□ 0.34
SNRPD3-201ENST00000215829 ITGA11Q9UKX5 1188 aa17.16■□□□□ 0.34
SNRPD3-201ENST00000215829 ATP11BQ9Y2G3 1177 aa17.16■□□□□ 0.34
SNRPD3-201ENST00000215829 GIT1Q9Y2X7 761 aa17.16■□□□□ 0.34
SNRPD3-201ENST00000215829 UMODL1Q5DID0 1318 aa17.16■□□□□ 0.34
SNRPD3-201ENST00000215829 PARNO95453 639 aaKnown RBP17.15■□□□□ 0.34
SNRPD3-201ENST00000215829 ITGB3P05106 788 aa17.15■□□□□ 0.34
SNRPD3-201ENST00000215829 SERPING1P05155 500 aa17.15■□□□□ 0.34
SNRPD3-201ENST00000215829 KRT19P08727 400 aa17.15■□□□□ 0.34
SNRPD3-201ENST00000215829 MTF1Q14872 753 aa17.15■□□□□ 0.34
SNRPD3-201ENST00000215829 RTN4RL1Q86UN2 441 aaPredicted RBP17.15■□□□□ 0.34
SNRPD3-201ENST00000215829 TAF4BQ92750 862 aa17.15■□□□□ 0.34
SNRPD3-201ENST00000215829 XYLT2Q9H1B5 865 aa17.15■□□□□ 0.34
SNRPD3-201ENST00000215829 NHEJ1Q9H9Q4 299 aaPredicted RBP17.15■□□□□ 0.34
SNRPD3-201ENST00000215829 ARHGAP20Q9P2F6 1191 aa17.15■□□□□ 0.34
SNRPD3-201ENST00000215829 UBQLN1Q9UMX0 589 aaKnown RBP17.15■□□□□ 0.34
SNRPD3-201ENST00000215829 NUB1Q9Y5A7 615 aa17.15■□□□□ 0.34
SNRPD3-201ENST00000215829 MEIS3P2A8K0S8 358 aa17.15■□□□□ 0.34
SNRPD3-201ENST00000215829 FERP16591 822 aa17.15■□□□□ 0.34
SNRPD3-201ENST00000215829 RBP5P82980 135 aa17.15■□□□□ 0.34
SNRPD3-201ENST00000215829 ARID5AQ03989 594 aa17.15■□□□□ 0.34
SNRPD3-201ENST00000215829 LRRC26Q2I0M4 334 aa17.15■□□□□ 0.34
SNRPD3-201ENST00000215829 PLEKHG4Q58EX7 1191 aa17.15■□□□□ 0.34
SNRPD3-201ENST00000215829 GLRA4Q5JXX5 417 aa17.15■□□□□ 0.34
SNRPD3-201ENST00000215829 AGMOQ6ZNB7 445 aa17.15■□□□□ 0.34
SNRPD3-201ENST00000215829 CCDC170Q8IYT3 715 aa17.15■□□□□ 0.34
SNRPD3-201ENST00000215829 BEST2Q8NFU1 509 aa17.15■□□□□ 0.34
SNRPD3-201ENST00000215829 SHC3Q92529 594 aa17.15■□□□□ 0.34
SNRPD3-201ENST00000215829 JAKMIP2Q96AA8 810 aa17.15■□□□□ 0.34
SNRPD3-201ENST00000215829 PGBD4Q96DM1 585 aa17.15■□□□□ 0.34
SNRPD3-201ENST00000215829 TBX21Q9UL17 535 aa17.15■□□□□ 0.34
SNRPD3-201ENST00000215829 BZW2Q9Y6E2 419 aaKnown RBP17.15■□□□□ 0.34
SNRPD3-201ENST00000215829 PDCD11Q14690 1871 aaKnown RBP17.14■□□□□ 0.34
SNRPD3-201ENST00000215829 XPOTO43592 962 aaKnown RBP17.14■□□□□ 0.33
SNRPD3-201ENST00000215829 GFPT2O94808 682 aa17.14■□□□□ 0.33
SNRPD3-201ENST00000215829 PLEKP08567 350 aaPredicted RBP17.14■□□□□ 0.33
SNRPD3-201ENST00000215829 CCDC172P0C7W6 258 aa17.14■□□□□ 0.33
SNRPD3-201ENST00000215829 PNMA6AP0CW24 399 aaPredicted RBP17.14■□□□□ 0.33
SNRPD3-201ENST00000215829 TBXAS1P24557 533 aaPredicted RBP17.14■□□□□ 0.33
SNRPD3-201ENST00000215829 ATICP31939 592 aa17.14■□□□□ 0.33
SNRPD3-201ENST00000215829 PRKCIP41743 596 aa17.14■□□□□ 0.33
SNRPD3-201ENST00000215829 GUCY2FP51841 1108 aa17.14■□□□□ 0.33
SNRPD3-201ENST00000215829 KLHL30Q0D2K2 578 aa17.14■□□□□ 0.33
SNRPD3-201ENST00000215829 MAPK8IP2Q13387 824 aaPredicted RBP17.14■□□□□ 0.33
SNRPD3-201ENST00000215829 CUL2Q13617 745 aa17.14■□□□□ 0.33
SNRPD3-201ENST00000215829 ZNF699Q32M78 642 aa17.14■□□□□ 0.33
SNRPD3-201ENST00000215829 SLC24A5Q71RS6 500 aa17.14■□□□□ 0.33
SNRPD3-201ENST00000215829 ECHDC2Q86YB7 292 aa17.14■□□□□ 0.33
SNRPD3-201ENST00000215829 GPIHBP1Q8IV16 184 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms