RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 ZSCAN26Q16670 478 aa8.83□□□□□ -1
VAMP3-201ENST00000054666 ZBTB33Q86T24 672 aa8.83□□□□□ -1
VAMP3-201ENST00000054666 CD302Q8IX05 232 aa8.83□□□□□ -1
VAMP3-201ENST00000054666 MCOLN2Q8IZK6 566 aa8.83□□□□□ -1
VAMP3-201ENST00000054666 LRRC71Q8N4P6 559 aa8.83□□□□□ -1
VAMP3-201ENST00000054666 RBBP8NLQ8NC74 664 aaPredicted RBP8.83□□□□□ -1
VAMP3-201ENST00000054666 SHCBP1Q8NEM2 672 aa8.83□□□□□ -1
VAMP3-201ENST00000054666 CD101Q93033 1021 aa8.83□□□□□ -1
VAMP3-201ENST00000054666 BTBD6Q96KE9 485 aa8.83□□□□□ -1
VAMP3-201ENST00000054666 FMO2Q99518 471 aa8.83□□□□□ -1
VAMP3-201ENST00000054666 TRIM51Q9BSJ1 452 aa8.83□□□□□ -1
VAMP3-201ENST00000054666 TRIM31Q9BZY9 425 aa8.83□□□□□ -1
VAMP3-201ENST00000054666 CCDC113Q9H0I3 377 aa8.83□□□□□ -1
VAMP3-201ENST00000054666 RBPJLQ9UBG7 517 aa8.83□□□□□ -1
VAMP3-201ENST00000054666 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.83□□□□□ -1
VAMP3-201ENST00000054666 PCDHA3Q9Y5H8 950 aa8.83□□□□□ -1
VAMP3-201ENST00000054666 CNTNAP2Q9UHC6 1331 aa8.83□□□□□ -1
VAMP3-201ENST00000054666 BHMG1C9JSJ3 638 aaPredicted RBP8.82□□□□□ -1
VAMP3-201ENST00000054666 MYO1FO00160 1098 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 THAP12O43422 761 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 HBP1O60381 514 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 MSCO60682 206 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 EDN1P05305 212 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 TMEM191BP0C7N4 346 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 TXNP10599 105 aaKnown RBP8.82□□□□□ -1
VAMP3-201ENST00000054666 CCNA1P78396 465 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 TRPC3Q13507 836 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 PLCB4Q15147 1175 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 ZNF568Q3ZCX4 644 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 LRIG3Q6UXM1 1119 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 DDX42Q86XP3 938 aaKnown RBP eCLIP8.82□□□□□ -1
VAMP3-201ENST00000054666 JAMLQ86YT9 394 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 RHPN2Q8IUC4 686 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 IQCKQ8N0W5 287 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 UBLCP1Q8WVY7 318 aaPredicted RBP8.82□□□□□ -1
VAMP3-201ENST00000054666 MAIP1Q8WWC4 291 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 CPA5Q8WXQ8 436 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 SEC14L1Q92503 715 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 MAGOHBQ96A72 148 aaKnown RBP8.82□□□□□ -1
VAMP3-201ENST00000054666 FAM212AQ96EL1 285 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 L3MBTL3Q96JM7 780 aaPredicted RBP8.82□□□□□ -1
VAMP3-201ENST00000054666 FGD4Q96M96 766 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 NLRP4Q96MN2 994 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 APOBEC3GQ9HC16 384 aaKnown RBP8.82□□□□□ -1
VAMP3-201ENST00000054666 MRPL47Q9HD33 250 aaKnown RBP8.82□□□□□ -1
VAMP3-201ENST00000054666 ERVK-5Q9HDB9 667 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 PARP2Q9UGN5 583 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 PLAAQ9Y263 795 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 SCINQ9Y6U3 715 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 MCM3APO60318 1980 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 A6NNZ2 444 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 INO80B-WBP1J3KQ70 363 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 PODXLO00592 558 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 GRIN3BO60391 1043 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 KRT14P02533 472 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 CYP1A1P04798 512 aaPredicted RBP8.82□□□□□ -1
VAMP3-201ENST00000054666 HSD17B3P37058 310 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 PEX5P50542 639 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 POU5F1Q01860 360 aaKnown RBP8.82□□□□□ -1
VAMP3-201ENST00000054666 MCL1Q07820 350 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 DUOXA2Q1HG44 320 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 TUBB8Q3ZCM7 444 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 SEZ6Q53EL9 994 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 EAPPQ56P03 285 aaPredicted RBP8.82□□□□□ -1
VAMP3-201ENST00000054666 CEP85LQ5SZL2 805 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 MPZL3Q6UWV2 235 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 SLC13A5Q86YT5 568 aaPredicted RBP8.82□□□□□ -1
VAMP3-201ENST00000054666 EFCAB13Q8IY85 973 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 OR5B17Q8NGF7 314 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.82□□□□□ -1
VAMP3-201ENST00000054666 UPF1Q92900 1129 aaKnown RBP eCLIP8.82□□□□□ -13e-6■■■■□ 23
VAMP3-201ENST00000054666 PKNOX2Q96KN3 472 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 ACO2Q99798 780 aaKnown RBP8.82□□□□□ -1
VAMP3-201ENST00000054666 C11orf70Q9BRQ4 267 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 ERP44Q9BS26 406 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 INO80BQ9C086 356 aaPredicted RBP8.82□□□□□ -1
VAMP3-201ENST00000054666 MTMR12Q9C0I1 747 aa8.82□□□□□ -1
VAMP3-201ENST00000054666 IGKV6-21A0A0C4DH24 114 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 HMGB1P1B2RPK0 211 aaPredicted RBP8.81□□□□□ -1
VAMP3-201ENST00000054666 SOCS7O14512 581 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 CALCAP01258 141 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 TNNC2P02585 160 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 MYZAPP0CAP1 466 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 ACO1P21399 889 aaKnown RBP8.81□□□□□ -1
VAMP3-201ENST00000054666 RRM1P23921 792 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 TNFSF9P41273 254 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 FNTAP49354 379 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 NOMO3P69849 1222 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 Q3C1V9 767 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 TTMPQ5BVD1 217 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 ATF7IP2Q5U623 682 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 AADACL2Q6P093 401 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 CCDC137Q6PK04 289 aaKnown RBP8.81□□□□□ -1
VAMP3-201ENST00000054666 MON1BQ7L1V2 547 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 PASD1Q8IV76 773 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 CCDC105Q8IYK2 499 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 ABRAQ8N0Z2 381 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 C18orf8Q96DM3 657 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 ANKRD36BP1Q96IX9 119 aa8.81□□□□□ -1
VAMP3-201ENST00000054666 VCPIP1Q96JH7 1222 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms