RNA–Protein interactions for RNA: ENST00000009180.8

CD9-201, Transcript of CD9 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD9, Length 1,169 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-201ENST00000009180 CD302Q8IX05 232 aa10.9□□□□□ -0.66
CD9-201ENST00000009180 C1orf127Q8N9H9 656 aa10.9□□□□□ -0.66
CD9-201ENST00000009180 PARD3BQ8TEW8 1205 aa10.9□□□□□ -0.66
CD9-201ENST00000009180 ARNTL2Q8WYA1 636 aa10.9□□□□□ -0.66
CD9-201ENST00000009180 ZNF516Q92618 1163 aa10.9□□□□□ -0.66
CD9-201ENST00000009180 BORCS6Q96GS4 357 aa10.9□□□□□ -0.66
CD9-201ENST00000009180 CNOT6LQ96LI5 555 aaKnown RBP10.9□□□□□ -0.66
CD9-201ENST00000009180 CEP63Q96MT8 703 aa10.9□□□□□ -0.66
CD9-201ENST00000009180 FAM161BQ96MY7 647 aa10.9□□□□□ -0.66
CD9-201ENST00000009180 TGS1Q96RS0 853 aaKnown RBP10.9□□□□□ -0.66
CD9-201ENST00000009180 FNBP1Q96RU3 617 aa10.9□□□□□ -0.66
CD9-201ENST00000009180 TTYH1Q9H313 450 aaPredicted RBP10.9□□□□□ -0.66
CD9-201ENST00000009180 MMRN2Q9H8L6 949 aa10.9□□□□□ -0.66
CD9-201ENST00000009180 SAMSN1Q9NSI8 373 aaKnown RBP10.9□□□□□ -0.66
CD9-201ENST00000009180 DPP3Q9NY33 737 aa10.9□□□□□ -0.66
CD9-201ENST00000009180 UBQLN1Q9UMX0 589 aaKnown RBP10.9□□□□□ -0.66
CD9-201ENST00000009180 DERAQ9Y315 318 aa10.9□□□□□ -0.66
CD9-201ENST00000009180 C2CD2Q9Y426 696 aa10.9□□□□□ -0.66
CD9-201ENST00000009180 PDCD11Q14690 1871 aaKnown RBP10.89□□□□□ -0.67
CD9-201ENST00000009180 COL4A4P53420 1690 aaPredicted RBP10.89□□□□□ -0.67
CD9-201ENST00000009180 I3L4J1 428 aa10.89□□□□□ -0.67
CD9-201ENST00000009180 HAX1O00165 279 aa10.89□□□□□ -0.67
CD9-201ENST00000009180 PODXLO00592 558 aa10.89□□□□□ -0.67
CD9-201ENST00000009180 TMEM191BP0C7N4 346 aa10.89□□□□□ -0.67
CD9-201ENST00000009180 KRT13P13646 458 aa10.89□□□□□ -0.67
CD9-201ENST00000009180 TNNI1P19237 187 aa10.89□□□□□ -0.67
CD9-201ENST00000009180 POLR2BP30876 1174 aaKnown RBP10.89□□□□□ -0.67
CD9-201ENST00000009180 BMPR1AP36894 532 aa10.89□□□□□ -0.67
CD9-201ENST00000009180 ERVK-21P61565 698 aa10.89□□□□□ -0.67
CD9-201ENST00000009180 POU5F1Q01860 360 aaKnown RBP10.89□□□□□ -0.67
CD9-201ENST00000009180 PPP3CAQ08209 521 aa10.89□□□□□ -0.67
CD9-201ENST00000009180 HSP90AA2PQ14568 343 aaPredicted RBP10.89□□□□□ -0.67
CD9-201ENST00000009180 EPC2Q52LR7 807 aa10.89□□□□□ -0.67
CD9-201ENST00000009180 DCAF17Q5H9S7 520 aaPredicted RBP10.89□□□□□ -0.67
CD9-201ENST00000009180 SPATA1Q5VX52 437 aa10.89□□□□□ -0.67
CD9-201ENST00000009180 INTS8Q75QN2 995 aaKnown RBP10.89□□□□□ -0.67
CD9-201ENST00000009180 FILIP1Q7Z7B0 1213 aa10.89□□□□□ -0.67
CD9-201ENST00000009180 WDR49Q8IV35 697 aa10.89□□□□□ -0.67
CD9-201ENST00000009180 SLC39A11Q8N1S5 342 aa10.89□□□□□ -0.67
CD9-201ENST00000009180 KLHL23Q8NBE8 558 aa10.89□□□□□ -0.67
CD9-201ENST00000009180 BEST2Q8NFU1 509 aa10.89□□□□□ -0.67
CD9-201ENST00000009180 TMC2Q8TDI7 906 aa10.89□□□□□ -0.67
CD9-201ENST00000009180 GDPD5Q8WTR4 605 aa10.89□□□□□ -0.67
CD9-201ENST00000009180 RSPH1Q8WYR4 309 aa10.89□□□□□ -0.67
CD9-201ENST00000009180 ELMO3Q96BJ8 720 aa10.89□□□□□ -0.67
CD9-201ENST00000009180 TMEM175Q9BSA9 504 aa10.89□□□□□ -0.67
CD9-201ENST00000009180 MKNK1Q9BUB5 465 aa10.89□□□□□ -0.67
CD9-201ENST00000009180 VN1R3Q9BXE9 311 aa10.89□□□□□ -0.67
CD9-201ENST00000009180 SLC38A7Q9NVC3 462 aa10.89□□□□□ -0.67
CD9-201ENST00000009180 INTS13Q9NVM9 706 aa10.89□□□□□ -0.67
CD9-201ENST00000009180 ARMCX3Q9UH62 379 aaPredicted RBP10.89□□□□□ -0.67
CD9-201ENST00000009180 SIX4Q9UIU6 781 aa10.89□□□□□ -0.67
CD9-201ENST00000009180 FAN1Q9Y2M0 1017 aa10.89□□□□□ -0.67
CD9-201ENST00000009180 NFE2L3Q9Y4A8 694 aa10.89□□□□□ -0.67
CD9-201ENST00000009180 TDRD15B5MCY1 1934 aaKnown RBP10.89□□□□□ -0.67
CD9-201ENST00000009180 CITO14578 2027 aa10.89□□□□□ -0.67
CD9-201ENST00000009180 CDH23Q9H251 3354 aa10.88□□□□□ -0.67
CD9-201ENST00000009180 MAPK13O15264 365 aa10.88□□□□□ -0.67
CD9-201ENST00000009180 FGF18O76093 207 aa10.88□□□□□ -0.67
CD9-201ENST00000009180 TNNC2P02585 160 aa10.88□□□□□ -0.67
CD9-201ENST00000009180 ITGB3P05106 788 aa10.88□□□□□ -0.67
CD9-201ENST00000009180 CYP3A5P20815 502 aa10.88□□□□□ -0.67
CD9-201ENST00000009180 BRCC3P46736 316 aa10.88□□□□□ -0.67
CD9-201ENST00000009180 GCLMP48507 274 aa10.88□□□□□ -0.67
CD9-201ENST00000009180 ALDH7A1P49419 539 aaKnown RBP10.88□□□□□ -0.67
CD9-201ENST00000009180 ZNF165P49910 485 aa10.88□□□□□ -0.67
CD9-201ENST00000009180 MYL5Q02045 173 aa10.88□□□□□ -0.67
CD9-201ENST00000009180 NCAPHQ15003 741 aa10.88□□□□□ -0.67
CD9-201ENST00000009180 SURF1Q15526 300 aa10.88□□□□□ -0.67
CD9-201ENST00000009180 UPP1Q16831 310 aa10.88□□□□□ -0.67
CD9-201ENST00000009180 CT47A1Q5JQC4 288 aaPredicted RBP10.88□□□□□ -0.67
CD9-201ENST00000009180 TCERG1LQ5VWI1 586 aa10.88□□□□□ -0.67
CD9-201ENST00000009180 TDRD10Q5VZ19 366 aaKnown RBP10.88□□□□□ -0.67
CD9-201ENST00000009180 C9orf57Q5W0N0 161 aa10.88□□□□□ -0.67
CD9-201ENST00000009180 LRSAM1Q6UWE0 723 aa10.88□□□□□ -0.67
CD9-201ENST00000009180 CD300LGQ6UXG3 332 aa10.88□□□□□ -0.67
CD9-201ENST00000009180 Q7L0L9 218 aa10.88□□□□□ -0.67
CD9-201ENST00000009180 CREBRFQ8IUR6 639 aa10.88□□□□□ -0.67
CD9-201ENST00000009180 DHX40Q8IX18 779 aaKnown RBP10.88□□□□□ -0.67
CD9-201ENST00000009180 FBXO22Q8NEZ5 403 aa10.88□□□□□ -0.67
CD9-201ENST00000009180 CXorf38Q8TB03 319 aa10.88□□□□□ -0.67
CD9-201ENST00000009180 ENOX1Q8TC92 643 aaKnown RBP10.88□□□□□ -0.67
CD9-201ENST00000009180 ANKRD36BP1Q96IX9 119 aa10.88□□□□□ -0.67
CD9-201ENST00000009180 B3GALT6Q96L58 329 aa10.88□□□□□ -0.67
CD9-201ENST00000009180 THAP9Q9H5L6 903 aa10.88□□□□□ -0.67
CD9-201ENST00000009180 ZNF576Q9H609 170 aa10.88□□□□□ -0.67
CD9-201ENST00000009180 CBX8Q9HC52 389 aa10.88□□□□□ -0.67
CD9-201ENST00000009180 ALG13Q9NP73 1137 aaKnown RBP10.88□□□□□ -0.67
CD9-201ENST00000009180 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.88□□□□□ -0.67
CD9-201ENST00000009180 AAASQ9NRG9 546 aa10.88□□□□□ -0.67
CD9-201ENST00000009180 SPG21Q9NZD8 308 aa10.88□□□□□ -0.67
CD9-201ENST00000009180 AGAP1Q9UPQ3 857 aa10.88□□□□□ -0.67
CD9-201ENST00000009180 PCDHB12Q9Y5F1 795 aa10.88□□□□□ -0.67
CD9-201ENST00000009180 NLRC5Q86WI3 1866 aa10.87□□□□□ -0.67
CD9-201ENST00000009180 TRIP11Q15643 1979 aa10.87□□□□□ -0.67
CD9-201ENST00000009180 ANO9A1A5B4 782 aa10.87□□□□□ -0.67
CD9-201ENST00000009180 C5orf67F2Z3F1 127 aa10.87□□□□□ -0.67
CD9-201ENST00000009180 SPTLC1O15269 473 aa10.87□□□□□ -0.67
CD9-201ENST00000009180 GRM6O15303 877 aa10.87□□□□□ -0.67
CD9-201ENST00000009180 XPOTO43592 962 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms