RNA–Protein interactions for RNA: ENSMUST00000209979.1

Ptpre-204, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ptpre, Length 4,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-204ENSMUST00000209979 GzmnQ920S1 248 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 NelfcdQ922L6 591 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Rab11fip1Q9D620 645 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Tube1Q9D6T1 475 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Cxcl11Q9JHH5 100 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Bnip3lQ9Z2F7 218 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Pabpc1lA2A5N3 607 aaKnown RBP9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Gm8011K7N6Y5 207 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Gm8926L7MUE8 181 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Orc4O88708 433 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Mucl2P02815 138 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Ddr1Q03146 911 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 CoilQ5SU73 570 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Nqo1Q64669 274 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Tas2r109Q7M707 316 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Gpt2Q8BGT5 522 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Wdr35Q8BND3 1181 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 EngaseQ8BX80 734 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Klhl11Q8CE33 709 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 PiguQ8K358 434 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 GsdmcQ99NB5 468 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Abhd2Q9QXM0 425 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Ubxn8Q9QZ49 277 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Fut8Q9WTS2 575 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Gm29554A0A087WNW4 188 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 A0A1Y7VML8 143 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Rnf19bA2A7Q9 732 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Pde8aO88502 823 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Serpinh1P19324 417 aaKnown RBP9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Btbd3P58545 530 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Zdhhc9P59268 364 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Klrb1Q0ZUP1 214 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 HelqQ2VPA6 1069 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Ap5z1Q3U829 807 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Odr4Q4PJX1 447 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 LRWD1Q8BUI3 648 aaKnown RBP9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Rnf219Q8K2Y0 722 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Sike1Q9CPR7 207 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Klhl28Q9CR40 571 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Pold4Q9CWP8 107 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Clvs1Q9D4C9 354 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Psmd12Q9D8W5 456 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Ascc1Q9D8Z1 356 aaKnown RBP9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Tex44Q9DA60 530 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Itga2bQ9QUM0 1033 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Smok2bQ9QYZ3 484 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Smok2aQ9QYZ6 504 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Osbpl10S4R1M9 766 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Rundc3aO08576 446 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Rpl5P47962 297 aaKnown RBP9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Itga1Q3V3R4 1179 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Rbbp7Q60973 425 aaKnown RBP9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Ifi47Q61635 420 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Nlrp9cQ66X01 1004 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Actl9Q8CG27 415 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 GaleQ8R059 347 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Scrn2Q8VCA8 425 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Hps4Q99KG7 671 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Psmd9Q9CR00 222 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Ppp1r3fQ9JIG4 799 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Peg3Q3URU2 1571 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Gm5799E9Q2M1 201 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Pald1P70261 859 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Mark2Q05512 776 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Sin3bQ62141 1098 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Gpbp1l1Q6NZP2 473 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Akap7Q7TN79 314 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Cpa1Q7TPZ8 419 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Q8BGD0 127 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Tarsl2Q8BLY2 790 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Plekhm3Q8BM47 761 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Pcdhb7Q8CDY9 829 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Dnajc5bQ9CQ94 199 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 CenpsQ9D084 142 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Tmem79Q9D709 391 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Gsdmdc1Q9D8T2 487 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Tnni1Q9WUZ5 187 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Entpd5Q9WUZ9 427 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Kank3Q9Z1P7 791 aa9.53□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Abcc2Q8VI47 1543 aa9.52□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Gm10406A6NAS4 205 aa9.52□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Gm3373A6NAS7 205 aa9.52□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Gm3252E9PUT9 216 aa9.52□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Gm3002E9PW72 216 aa9.52□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Gm3298E9PW80 205 aa9.52□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Slc27a6E9Q9W4 619 aa9.52□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Gm3468E9QAJ8 216 aa9.52□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Gm2832F7AEC7 200 aa9.52□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Gm3667K7N757 205 aa9.52□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Kpna4O35343 521 aa9.52□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Abcb1bP06795 1276 aa9.52□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Hoxb8P09632 243 aa9.52□□□□□ -0.88
Ptpre-204ENSMUST00000209979 RaraP11416 462 aa9.52□□□□□ -0.88
Ptpre-204ENSMUST00000209979 CblP22682 913 aa9.52□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Cct3P80318 545 aaKnown RBP9.52□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Zbtb8osQ505B7 168 aa9.52□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Gm3558Q5FWC9 205 aa9.52□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Btbd10Q80X66 475 aa9.52□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Q8CIL4 281 aa9.52□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Q91WD4 421 aa9.52□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 21.5 ms