RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Ifi206G3UZV2 921 aa16.32■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Orc2Q60862 576 aaKnown RBP16.32■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Pcdha10Q91Y20 946 aa16.32■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Slc5a4aQ9ET37 656 aa16.32■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Kiaa0232Q80U59 1396 aaKnown RBP16.32■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Dnmt1P13864 1620 aaKnown RBP16.32■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Anxa8O35640 327 aa16.32■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Casp4P70343 373 aa16.32■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Pcdha11Q91Y19 950 aa16.32■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Hars2Q99KK9 505 aa16.32■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Zmat2Q9CPW7 199 aa16.32■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Usp29Q9ES63 869 aa16.32■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Abcb11Q9QY30 1321 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Hecw2Q6I6G8 1578 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Osbpl7A2A716 963 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Chil3O35744 398 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 LxnP70202 222 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Myo1dQ5SYD0 1006 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Vmn2r43Q80Z08 845 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Vcpip1Q8CDG3 1220 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Cwf19l1Q8CI33 537 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 CrotQ9DC50 612 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 MaddQ80U28 1577 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Pramel3A2AHA7 463 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Gm7903A2AWL1 463 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 AV320801A2AWL3 467 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Hmgxb3G3X9M3 1254 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Gm15023L7MUB4 467 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Irf8P23611 424 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 9130409I23RikQ3TS87 320 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Atp13a5Q3TYU2 1216 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Rrp36Q3UFY0 244 aaKnown RBP16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Grid1Q61627 1009 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Mindy1Q76LS9 468 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Lrrc1Q80VQ1 524 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Strip2Q8C9H6 844 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Ube2q2Q8K2Z8 378 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 1700123K08RikQ9D991 295 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 NfkbiaQ9Z1E3 314 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Arhgap33Q80YF9 1305 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Etnk2A7MCT6 385 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 LtbrP50284 415 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Gm136Q3V037 328 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Myo19Q5SV80 963 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Nudt16Q6P3D0 195 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Tmc4Q7TQ65 694 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Baiap2l2Q80Y61 522 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 RecqlQ9Z129 648 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Gm5134E9QAB5 671 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Gdf10P97737 476 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Rhox12Q4TU81 186 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Mrps31Q61733 384 aaKnown RBP16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Atp4aQ64436 1033 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Q6GQU0 248 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Rhpn2Q8BWR8 686 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Thg1lQ9CY52 298 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Q9CYI0 393 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Cdkl2Q9QUK0 568 aa16.31■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Zfp788E9Q980 884 aa16.3■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Kiaa0319Q5SZV5 1081 aa16.3■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Ddx5Q61656 614 aaKnown RBP16.3■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Wdr91Q7TMQ7 748 aa16.3■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Zfp454Q80Y34 536 aa16.3■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 AarsQ8BGQ7 968 aa16.3■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Kcnq3Q8K3F6 873 aa16.3■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Olfr1494Q8VGP8 315 aa16.3■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Pcdhb11Q91UZ8 797 aa16.3■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Psmd9Q9CR00 222 aa16.3■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Ndc80Q9D0F1 642 aaKnown RBP16.3■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 IscuQ9D7P6 168 aa16.3■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Olfr711Q9EPG2 314 aa16.3■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Pidd1Q9ERV7 915 aa16.3■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 4930469K13RikA0A286YDB2 92 aa16.3■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Gm1604bQ3TRG0 118 aa16.3■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Trim75Q3UWZ0 467 aa16.3■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Ubxn2aQ99KJ0 258 aa16.3■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 FignQ9ERZ6 759 aa16.3■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Ifi202Q9R002 445 aa16.3■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Kiaa1210E9Q0C6 1637 aa16.3■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Akap17bA2A3V1 959 aa16.3■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Ugt1a8D3Z748 530 aa16.3■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Ugt1a10E9PXN7 530 aa16.3■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Arhgap44Q5SSM3 814 aa16.3■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Klra5Q60652 266 aa16.3■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Hspa1aQ61696 641 aa16.3■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Ddx3xQ62167 662 aaKnown RBP16.3■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Gm2163Q6PCY5 473 aa16.3■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Tbc1d10cQ8C9V1 444 aa16.3■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 BfarQ8R079 450 aa16.3■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Ctnnal1O88327 731 aa16.3■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Serpina5P70458 405 aa16.3■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Ttc7aQ8BGB2 858 aa16.3■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Vwa5aQ99KC8 793 aaKnown RBP16.3■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Naaladl2A0A0N4SUJ3 795 aa16.29■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Lonrf1D3YY23 762 aa16.29■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Got1P05201 413 aa16.29■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Usp4P35123 962 aa16.29■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 SpdyaQ5IBH7 310 aa16.29■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Nfe2l2Q60795 597 aa16.29■□□□□ 0.2
Pcdha9-201ENSMUST00000115659 Pdzph1Q8BGR1 1238 aa16.29■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 37.5 ms