RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 NsfP46460 744 aa12.28□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Zfyve27Q3TXX3 415 aa12.28□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Atp13a5Q3TYU2 1216 aa12.28□□□□□ -0.44
Col9a1-202ENSMUST00000088349 AlcamQ61490 583 aa12.28□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Fbxo41Q6NS60 873 aa12.28□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Trpa1Q8BLA8 1125 aa12.28□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Slc9a9Q8BZ00 644 aa12.28□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Myef2Q8C854 591 aaKnown RBP12.28□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Rhobtb2Q91V93 728 aa12.28□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Q9D2Q3 444 aa12.28□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Cep83Q9D5R3 692 aa12.28□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Sv2aQ9JIS5 742 aa12.28□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Zscan4-ps3A0A1B0GRH6 506 aa12.28□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Zscan4-ps2A0A1C7CYU6 506 aa12.28□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Ttll6A4Q9E8 822 aa12.28□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Mmrn2A6H6E2 943 aa12.28□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Cyp4f40G3UW81 524 aa12.28□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Zfp212G3X8R7 492 aa12.28□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Rps6P62754 249 aaKnown RBP12.28□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Rmdn3Q3UJU9 470 aa12.28□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Insm1Q63ZV0 521 aa12.28□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Ddx42Q810A7 929 aaKnown RBP12.28□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Orai2Q8BH10 250 aa12.28□□□□□ -0.44
Col9a1-202ENSMUST00000088349 ItpkaQ8R071 459 aa12.28□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Cd300ldQ8VCH2 221 aa12.28□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Caskin2Q8VHK1 1201 aa12.28□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Bzw1Q9CQC6 419 aaKnown RBP12.28□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Tmed5Q9CXE7 229 aa12.28□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Rnf6Q9DBU5 667 aa12.28□□□□□ -0.44
Col9a1-202ENSMUST00000088349 AuhQ9JLZ3 314 aa12.28□□□□□ -0.44
Col9a1-202ENSMUST00000088349 JmyQ9QXM1 983 aa12.28□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Prmt2Q9R144 448 aa12.28□□□□□ -0.44
Col9a1-202ENSMUST00000088349 FscbA1EGX6 1074 aa12.27□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Unc13dB2RUP2 1085 aa12.27□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Wnt7bP28047 349 aa12.27□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Cdc25cP48967 447 aa12.27□□□□□ -0.44
Col9a1-202ENSMUST00000088349 UrosP51163 265 aa12.27□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Gbp1Q01514 589 aa12.27□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Cdca2Q14B71 982 aaKnown RBP12.27□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Phactr1Q2M3X8 580 aa12.27□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Gprin1Q3UNH4 932 aa12.27□□□□□ -0.44
Col9a1-202ENSMUST00000088349 RilpQ5ND29 369 aa12.27□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Klhdc10Q6PAR0 439 aa12.27□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Acbd3Q8BMP6 525 aa12.27□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Leg1Q8C6C9 337 aa12.27□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Atp5c1Q91VR2 298 aaKnown RBP12.27□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Med15Q924H2 789 aa12.27□□□□□ -0.44
Col9a1-202ENSMUST00000088349 GrapQ9CX99 217 aa12.27□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Cuedc2Q9CXX9 284 aa12.27□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Q9CYI0 393 aa12.27□□□□□ -0.44
Col9a1-202ENSMUST00000088349 NkapQ9D0F4 415 aaKnown RBP12.27□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Extl3Q9WVL6 918 aa12.27□□□□□ -0.44
Col9a1-202ENSMUST00000088349 SynrgQ5SV85 1306 aa12.27□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Zfp457L7N1X4 647 aa12.27□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Vmn2r15L7N2A0 855 aa12.27□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Eef1bO70251 225 aaKnown RBP12.27□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Fgfr1P16092 822 aa12.27□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Cxcr2P35343 359 aa12.27□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Ccdc117Q6PB51 277 aa12.27□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Pcdhb12Q91Y07 789 aa12.27□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Mrpl11Q9CQF0 192 aaKnown RBP12.27□□□□□ -0.45
Col9a1-202ENSMUST00000088349 CtsfQ9R013 462 aa12.27□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Taf4bG5E8Z2 855 aa12.26□□□□□ -0.45
Col9a1-202ENSMUST00000088349 CaluO35887 315 aa12.26□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Serpina1aP07758 413 aa12.26□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Ccnd2P30280 289 aa12.26□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Wnt10bP48614 389 aa12.26□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Ripk2P58801 539 aa12.26□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Serpina1cQ00896 412 aa12.26□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Serpina1dQ00897 413 aa12.26□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Yy1Q00899 414 aa12.26□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Dzip1lQ499E4 774 aa12.26□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Ppp1r13lQ5I1X5 824 aa12.26□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Tcf4Q60722 670 aa12.26□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Ankzf1Q80UU1 748 aaKnown RBP12.26□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Sap130Q8BIH0 1057 aa12.26□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Lrrc8cQ8R502 803 aa12.26□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Rev1Q920Q2 1249 aa12.26□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Hdac9Q99N13 588 aa12.26□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Pgm1Q9D0F9 562 aa12.26□□□□□ -0.45
Col9a1-202ENSMUST00000088349 DmgdhQ9DBT9 869 aa12.26□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Tjp3Q9QXY1 905 aa12.26□□□□□ -0.45
Col9a1-202ENSMUST00000088349 PygmQ9WUB3 842 aaKnown RBP12.26□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Cib2Q9Z309 187 aa12.26□□□□□ -0.45
Col9a1-202ENSMUST00000088349 PrlP06879 226 aa12.26□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Pdha1P35486 390 aaKnown RBP12.26□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Kcnn2P58390 839 aa12.26□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Igsf9Q05BQ1 1179 aa12.26□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Edem3Q2HXL6 931 aa12.26□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Upf3bQ3ULL6 472 aa12.26□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Fam92bQ3V2J0 292 aa12.26□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Naif1Q6PFD7 327 aa12.26□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Tdpoz4Q6YCH2 370 aa12.26□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Dus1lQ8C2P3 475 aa12.26□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Ugt3a2Q8JZZ0 523 aa12.26□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Pde6cQ91ZQ1 861 aa12.26□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Ttc7bE9Q6P5 843 aa12.26□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Prdm15E9Q8T2 1174 aa12.26□□□□□ -0.45
Col9a1-202ENSMUST00000088349 CflarO35732 481 aa12.26□□□□□ -0.45
Col9a1-202ENSMUST00000088349 Chil3O35744 398 aa12.26□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 32.4 ms