RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Trpm5Q9JJH7 1158 aa24.49■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Arih2Q9Z1K6 492 aa24.49■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Efcab12V9GXH0 673 aa24.49■■□□□ 1.51
Upf3a-201ENSMUST00000043767 GscQ02591 256 aa24.49■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Crhr2Q60748 411 aa24.49■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Dsg1aQ61495 1057 aa24.49■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Kcnt1Q6ZPR4 1224 aa24.49■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Slc26a6Q8CIW6 758 aa24.49■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Tlr3Q99MB1 905 aa24.49■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Rab27aQ9ERI2 221 aa24.49■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Rfx5Q9JL61 658 aa24.49■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Plekhg4A0A1L1SU27 1217 aa24.48■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Pla2g4aP47713 748 aa24.48■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Zbtb8osQ505B7 168 aa24.48■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Pacsin1Q61644 441 aa24.48■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Mrgprb8Q7TN51 330 aa24.48■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Taf2Q8C176 1104 aa24.48■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Cog3Q8CI04 820 aa24.48■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Vps36Q91XD6 386 aa24.48■■□□□ 1.51
Upf3a-201ENSMUST00000043767 MesdQ9ERE7 224 aa24.48■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Pitpnm1O35954 1243 aa24.47■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Myo1fP70248 1099 aa24.47■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Snx25Q3ZT31 840 aa24.47■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Ppp1r1bQ60829 194 aa24.47■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Irak1Q62406 710 aa24.47■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Ago3Q8CJF9 860 aa24.47■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Defb19Q8K3I8 83 aa24.47■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Bzw2Q91VK1 419 aaKnown RBP24.47■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Socs4Q91ZA6 436 aa24.47■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Fam133bQ9CVI2 245 aaKnown RBP24.47■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Arid2E9Q7E2 1828 aa24.47■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Col5a3Q9JLI2 1739 aa24.47■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Dnajc21E9Q8D0 531 aa24.47■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Pcbp1P60335 356 aaKnown RBP24.47■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Dlg3P70175 849 aa24.47■■□□□ 1.51
Upf3a-201ENSMUST00000043767 FdxrQ61578 494 aa24.47■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Ddx3xQ62167 662 aaKnown RBP24.47■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Ube2q1Q7TSS2 422 aa24.47■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Zmat2Q9CPW7 199 aa24.47■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Ptpn3A2ALK8 913 aa24.46■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Gucy1b3O54865 620 aa24.46■■□□□ 1.51
Upf3a-201ENSMUST00000043767 MycP01108 439 aa24.46■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Xrcc6P23475 608 aa24.46■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Aimp1P31230 310 aaKnown RBP24.46■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Tspan18Q80WR1 248 aa24.46■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Depdc1bQ8BH88 529 aa24.46■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Spata16Q8C636 571 aa24.46■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Ap3m2Q8R2R9 418 aa24.46■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Prkag2Q91WG5 566 aa24.46■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Zfyve19Q9DAZ9 389 aa24.46■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Igkv10-96A0A140T8M1 115 aa24.46■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Trim12cD3Z3L3 497 aa24.46■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Zfp882E9Q4R4 555 aa24.46■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Plekha5E9Q6H8 1269 aa24.46■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Tnnc2P20801 160 aa24.46■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Tulp2P46686 562 aa24.46■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Gfpt1P47856 697 aa24.46■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Adcy2Q80TL1 1090 aa24.46■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Sdad1Q80UZ2 687 aaKnown RBP24.46■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Bola2Q8BGS2 86 aa24.46■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Akirin1Q99LF1 191 aa24.46■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Ccdc83Q9D4V3 305 aa24.46■■□□□ 1.51
Upf3a-201ENSMUST00000043767 Egfl7Q9QXT5 275 aa24.46■■□□□ 1.51
Upf3a-201ENSMUST00000043767 1700017N19RikA0A087WPJ1 469 aa24.45■■□□□ 1.5
Upf3a-201ENSMUST00000043767 Vmn2r17E9PYF5 849 aa24.45■■□□□ 1.5
Upf3a-201ENSMUST00000043767 2010300C02RikE9Q3M9 1175 aa24.45■■□□□ 1.5
Upf3a-201ENSMUST00000043767 Foxn2E9Q7L6 429 aa24.45■■□□□ 1.5
Upf3a-201ENSMUST00000043767 Tnfrsf18O35714 228 aa24.45■■□□□ 1.5
Upf3a-201ENSMUST00000043767 Rnpc3Q3UZ01 514 aaKnown RBP24.45■■□□□ 1.5
Upf3a-201ENSMUST00000043767 Ttc7aQ8BGB2 858 aa24.45■■□□□ 1.5
Upf3a-201ENSMUST00000043767 Zswim3Q8CFL8 695 aa24.45■■□□□ 1.5
Upf3a-201ENSMUST00000043767 B4galt3Q91YY2 395 aa24.45■■□□□ 1.5
Upf3a-201ENSMUST00000043767 Asb7Q91ZU0 318 aa24.45■■□□□ 1.5
Upf3a-201ENSMUST00000043767 Atp6ap2Q9CYN9 350 aa24.45■■□□□ 1.5
Upf3a-201ENSMUST00000043767 Trim54Q9ERP3 366 aa24.45■■□□□ 1.5
Upf3a-201ENSMUST00000043767 Cd97Q9Z0M6 818 aa24.45■■□□□ 1.5
Upf3a-201ENSMUST00000043767 2210011C24RikA0A087WQ89 206 aa24.44■■□□□ 1.5
Upf3a-201ENSMUST00000043767 EnahQ03173 802 aa24.44■■□□□ 1.5
Upf3a-201ENSMUST00000043767 Rnf113a2Q14B01 337 aa24.44■■□□□ 1.5
Upf3a-201ENSMUST00000043767 FancbQ5XJY6 703 aa24.44■■□□□ 1.5
Upf3a-201ENSMUST00000043767 Ppm1eQ80TL0 749 aa24.44■■□□□ 1.5
Upf3a-201ENSMUST00000043767 Vcpip1Q8CDG3 1220 aa24.44■■□□□ 1.5
Upf3a-201ENSMUST00000043767 Trpc3Q9QZC1 836 aa24.44■■□□□ 1.5
Upf3a-201ENSMUST00000043767 Adam22Q9R1V6 904 aa24.44■■□□□ 1.5
Upf3a-201ENSMUST00000043767 Adamts9E9PUN6 1931 aa24.44■■□□□ 1.5
Upf3a-201ENSMUST00000043767 Slc26a2Q62273 739 aa24.44■■□□□ 1.5
Upf3a-201ENSMUST00000043767 Kcnv1Q8BZN2 503 aa24.44■■□□□ 1.5
Upf3a-201ENSMUST00000043767 NcaphQ8C156 731 aa24.44■■□□□ 1.5
Upf3a-201ENSMUST00000043767 Smg8Q8VE18 991 aa24.44■■□□□ 1.5
Upf3a-201ENSMUST00000043767 EpgnQ924X1 152 aa24.44■■□□□ 1.5
Upf3a-201ENSMUST00000043767 Ergic2Q9CR89 377 aa24.44■■□□□ 1.5
Upf3a-201ENSMUST00000043767 Ubxn11Q9D572 484 aa24.44■■□□□ 1.5
Upf3a-201ENSMUST00000043767 Adgrf5G5E8Q8 1348 aa24.43■■□□□ 1.5
Upf3a-201ENSMUST00000043767 Sclt1G5E861 688 aa24.43■■□□□ 1.5
Upf3a-201ENSMUST00000043767 Echdc2Q3TLP5 296 aa24.43■■□□□ 1.5
Upf3a-201ENSMUST00000043767 Mapk6Q61532 720 aa24.43■■□□□ 1.5
Upf3a-201ENSMUST00000043767 HrQ61645 1182 aa24.43■■□□□ 1.5
Upf3a-201ENSMUST00000043767 Cfap100Q80VN0 613 aa24.43■■□□□ 1.5
Upf3a-201ENSMUST00000043767 Angptl3Q9R182 455 aa24.43■■□□□ 1.5
Upf3a-201ENSMUST00000043767 Gm10110D3Z5M2 615 aa24.42■■□□□ 1.5
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms