RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Mindy1Q76LS9 468 aa11.27□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Arhgap33Q80YF9 1305 aa11.27□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Suds3Q8BR65 328 aa11.27□□□□□ -0.61
Rnf40-201ENSMUST00000033088 SucoQ8C341 1250 aa11.27□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Plcg2Q8CIH5 1265 aa11.27□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Pdxdc1Q99K01 787 aaKnown RBP11.27□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Tmod4Q9JLH8 345 aa11.27□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Gipc2Q9Z2H7 314 aa11.27□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Map1bP14873 2464 aaKnown RBP11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Gm13023A2A8N2 498 aa11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Cwf19l2Q8BG79 887 aaKnown RBP11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Lrrc4cQ8C031 640 aa11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Pcdha10Q91Y20 946 aa11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Ubxn6Q99PL6 442 aa11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Mrpl2Q9D773 306 aaKnown RBP11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Psmg1Q9JK23 289 aa11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Zc3h7bF8VPP8 982 aaKnown RBP11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Gm10250G3X9L6 160 aaKnown RBP11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 4930544D05RikJ3QK56 214 aa11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Mdm4O35618 489 aa11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Fam193bQ3U2K0 892 aa11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 WaplQ65Z40 1200 aaKnown RBP11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Pcmtd2Q8BHD8 359 aa11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Chtf18Q8BIW9 969 aa11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Osbpl2Q8BX94 484 aa11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Znf451Q8C0P7 1056 aa11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 TwnkQ8CIW5 685 aa11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Dusp19Q8K4T5 220 aa11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Sh3kbp1Q8R550 709 aaKnown RBP11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Slc12a8Q8VI23 705 aa11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Tmed5Q9CXE7 229 aa11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Atp5hQ9DCX2 161 aa11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Ccdc22Q9JIG7 627 aa11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Capn7Q9R1S8 813 aa11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Abca3Q8R420 1704 aa11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Zbed6D2EAC2 980 aa11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Tekt5G5E8A8 557 aa11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 P01734 135 aa11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Ptpn12P35831 775 aa11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Tlr8P58682 1032 aa11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Etv6P97360 485 aa11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Epas1P97481 874 aa11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Kmt5aQ2YDW7 349 aa11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Atp2a3Q64518 1038 aa11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Dennd2cQ6P9P8 914 aa11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Tma7Q8K003 64 aaKnown RBP11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Alg9Q8VDI9 611 aa11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Tdrd3Q91W18 743 aaKnown RBP11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Pcdhgb1Q91XX8 918 aa11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 PudpQ9D5U5 234 aa11.26□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Sh3tc1G3X9F6 1346 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Iqca1lA6H690 825 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Clrn2B2RVW2 232 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Zfp94E9Q6Y4 486 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Pex5O09012 639 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Tlk2O55047 718 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Cyp11b2P15539 500 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Hace1Q3U0D9 909 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Kctd21Q3URF8 260 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Ndufaf2Q59J78 168 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Chi3l1Q61362 389 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Plekhh3Q8VCE9 796 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Ttll1Q91V51 423 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Ces1fQ91WU0 561 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 LrgukQ9D5S7 820 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Cmtr1Q9DBC3 837 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Gdap2Q9DBL2 498 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Scyl3Q9DBQ7 735 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Anapc7Q9WVM3 565 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Myh1Q5SX40 1942 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 4931406B18RikA2RSL7 367 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Tnni3P48787 211 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Gpc4P51655 557 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Casp4P70343 373 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Snai1Q02085 264 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Hddc2Q3SXD3 199 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Cyp11b1Q3TG86 501 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Togaram2Q3TYG6 1002 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Vav2Q60992 868 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Gstt2Q61133 244 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Fastkd1Q6DI86 829 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Znf879Q8BI99 563 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Ccdc90bQ8C3X2 256 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Tbl3Q8C4J7 801 aaKnown RBP11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 RadxQ8C779 850 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Sec63Q8VHE0 760 aaKnown RBP11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Pdk3Q922H2 415 aaKnown RBP11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Grtp1Q9D3N8 359 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Nudt5Q9JKX6 218 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 RecqlQ9Z129 648 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Mtmr1Q9Z2C4 669 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Gm44511A0A0N4SW10 223 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Slfn8B1ARD8 910 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Abcb5B5X0E4 1255 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Abi2P62484 446 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Calb2Q08331 271 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Arid5aQ3U108 590 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Syne3Q4FZC9 975 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Dync1li2Q6PDL0 492 aaKnown RBP11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Thap3Q8BJ25 218 aa11.25□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 40.6 ms