RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Klra7Q60654 280 aa17.21■□□□□ 0.34
Trim28-201ENSMUST00000005705 Gpatch2lQ6PE65 482 aa17.21■□□□□ 0.34
Trim28-201ENSMUST00000005705 Lmo3Q8BZL8 145 aa17.21■□□□□ 0.34
Trim28-201ENSMUST00000005705 Znf467Q8JZL0 594 aa17.21■□□□□ 0.34
Trim28-201ENSMUST00000005705 Scgb2b21A0A087WQA9 112 aa17.2■□□□□ 0.34
Trim28-201ENSMUST00000005705 FscbA1EGX6 1074 aa17.2■□□□□ 0.34
Trim28-201ENSMUST00000005705 Itgb5O70309 798 aa17.2■□□□□ 0.34
Trim28-201ENSMUST00000005705 Gad2P48320 585 aa17.2■□□□□ 0.34
Trim28-201ENSMUST00000005705 Acbd3Q8BMP6 525 aa17.2■□□□□ 0.34
Trim28-201ENSMUST00000005705 Arhgap18Q8K0Q5 663 aa17.2■□□□□ 0.34
Trim28-201ENSMUST00000005705 Orc3Q9JK30 715 aaKnown RBP17.2■□□□□ 0.34
Trim28-201ENSMUST00000005705 Eddm13E9Q7F5 164 aa17.2■□□□□ 0.34
Trim28-201ENSMUST00000005705 Epas1P97481 874 aa17.2■□□□□ 0.34
Trim28-201ENSMUST00000005705 Skap1Q3UUV5 355 aa17.2■□□□□ 0.34
Trim28-201ENSMUST00000005705 Fam81aQ3UXZ6 364 aa17.2■□□□□ 0.34
Trim28-201ENSMUST00000005705 Ctc1Q5SUQ9 1212 aa17.2■□□□□ 0.34
Trim28-201ENSMUST00000005705 Ppp2r5eQ61151 467 aa17.2■□□□□ 0.34
Trim28-201ENSMUST00000005705 Inpp4bQ6P1Y8 924 aa17.2■□□□□ 0.34
Trim28-201ENSMUST00000005705 Fsd1lQ8BYN5 507 aa17.2■□□□□ 0.34
Trim28-201ENSMUST00000005705 4921504E06RikQ8CET2 560 aa17.2■□□□□ 0.34
Trim28-201ENSMUST00000005705 ClasrpQ8CFC7 668 aa17.2■□□□□ 0.34
Trim28-201ENSMUST00000005705 Sned1Q70E20 1403 aa17.2■□□□□ 0.34
Trim28-201ENSMUST00000005705 Nrxn2E9Q7X7 1710 aa17.19■□□□□ 0.34
Trim28-201ENSMUST00000005705 Gm5926E9PWJ8 236 aa17.19■□□□□ 0.34
Trim28-201ENSMUST00000005705 Pex5O09012 639 aa17.19■□□□□ 0.34
Trim28-201ENSMUST00000005705 CflarO35732 481 aa17.19■□□□□ 0.34
Trim28-201ENSMUST00000005705 Ifnb1P01575 182 aa17.19■□□□□ 0.34
Trim28-201ENSMUST00000005705 Rpl7aP12970 266 aaKnown RBP17.19■□□□□ 0.34
Trim28-201ENSMUST00000005705 SftpbP50405 377 aa17.19■□□□□ 0.34
Trim28-201ENSMUST00000005705 Col6a1Q04857 1025 aa17.19■□□□□ 0.34
Trim28-201ENSMUST00000005705 Btnl9Q8BJE2 536 aa17.19■□□□□ 0.34
Trim28-201ENSMUST00000005705 Slc12a8Q8VI23 705 aa17.19■□□□□ 0.34
Trim28-201ENSMUST00000005705 Pcdhb12Q91Y07 789 aa17.19■□□□□ 0.34
Trim28-201ENSMUST00000005705 Nop56Q9D6Z1 580 aaKnown RBP17.19■□□□□ 0.34
Trim28-201ENSMUST00000005705 IydQ9DCX8 285 aa17.19■□□□□ 0.34
Trim28-201ENSMUST00000005705 Gm11985A0A1B0GS61 206 aa17.19■□□□□ 0.34
Trim28-201ENSMUST00000005705 Pdzrn4E9PUZ9 1014 aa17.19■□□□□ 0.34
Trim28-201ENSMUST00000005705 Atf2P16951 487 aaKnown RBP17.19■□□□□ 0.34
Trim28-201ENSMUST00000005705 Tmc8Q7TN58 722 aa17.19■□□□□ 0.34
Trim28-201ENSMUST00000005705 Znf445Q8R2V3 986 aa17.19■□□□□ 0.34
Trim28-201ENSMUST00000005705 Ciapin1Q8WTY4 309 aa17.19■□□□□ 0.34
Trim28-201ENSMUST00000005705 Q9CYI0 393 aa17.19■□□□□ 0.34
Trim28-201ENSMUST00000005705 Smok2bQ9QYZ3 484 aa17.19■□□□□ 0.34
Trim28-201ENSMUST00000005705 Smok2aQ9QYZ6 504 aa17.19■□□□□ 0.34
Trim28-201ENSMUST00000005705 Dab2P98078 766 aa17.19■□□□□ 0.34
Trim28-201ENSMUST00000005705 Vav2Q60992 868 aa17.19■□□□□ 0.34
Trim28-201ENSMUST00000005705 A430089I19RikQ8C9W1 407 aa17.19■□□□□ 0.34
Trim28-201ENSMUST00000005705 Kiaa0391Q8JZY4 584 aaKnown RBP17.19■□□□□ 0.34
Trim28-201ENSMUST00000005705 Tmed5Q9CXE7 229 aa17.19■□□□□ 0.34
Trim28-201ENSMUST00000005705 Nup50Q9JIH2 466 aaKnown RBP17.19■□□□□ 0.34
Trim28-201ENSMUST00000005705 Tjp3Q9QXY1 905 aa17.19■□□□□ 0.34
Trim28-201ENSMUST00000005705 Gpr161B2RPY5 545 aa17.18■□□□□ 0.34
Trim28-201ENSMUST00000005705 Speer2E9Q9U2 264 aa17.18■□□□□ 0.34
Trim28-201ENSMUST00000005705 AgxtO35423 414 aa17.18■□□□□ 0.34
Trim28-201ENSMUST00000005705 Cyp2b9P12790 491 aa17.18■□□□□ 0.34
Trim28-201ENSMUST00000005705 Ogfod1Q3U0K8 545 aa17.18■□□□□ 0.34
Trim28-201ENSMUST00000005705 Gxylt1Q3UHH8 404 aa17.18■□□□□ 0.34
Trim28-201ENSMUST00000005705 Q3UJP5 209 aa17.18■□□□□ 0.34
Trim28-201ENSMUST00000005705 Rmdn3Q3UJU9 470 aa17.18■□□□□ 0.34
Trim28-201ENSMUST00000005705 WlsQ6DID7 541 aa17.18■□□□□ 0.34
Trim28-201ENSMUST00000005705 Nr3c2Q8VII8 978 aa17.18■□□□□ 0.34
Trim28-201ENSMUST00000005705 Setd6Q9CWY3 473 aa17.18■□□□□ 0.34
Trim28-201ENSMUST00000005705 Npr3P70180 536 aa17.18■□□□□ 0.34
Trim28-201ENSMUST00000005705 Spink5Q148R4 1017 aa17.18■□□□□ 0.34
Trim28-201ENSMUST00000005705 Ctnna2Q61301 953 aa17.18■□□□□ 0.34
Trim28-201ENSMUST00000005705 Klra3Q64329 266 aa17.18■□□□□ 0.34
Trim28-201ENSMUST00000005705 Sap130Q8BIH0 1057 aa17.18■□□□□ 0.34
Trim28-201ENSMUST00000005705 Fbxo38Q8BMI0 1194 aa17.18■□□□□ 0.34
Trim28-201ENSMUST00000005705 Ppm1kQ8BXN7 372 aa17.18■□□□□ 0.34
Trim28-201ENSMUST00000005705 Tph2Q8CGV2 488 aa17.18■□□□□ 0.34
Trim28-201ENSMUST00000005705 Slc39a3Q99K24 317 aa17.18■□□□□ 0.34
Trim28-201ENSMUST00000005705 Tcirg1Q9JHF5 834 aa17.18■□□□□ 0.34
Trim28-201ENSMUST00000005705 Ptgdr2Q9Z2J6 382 aa17.18■□□□□ 0.34
Trim28-201ENSMUST00000005705 Tldc2A2ACG1 198 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 Gm6588E9Q3K0 461 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 PtproE9Q612 1226 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 Ebf2O08792 575 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 DffaO54786 331 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 Rb1P13405 921 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 Rnf113a2Q14B01 337 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 Kmt5aQ2YDW7 349 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 Gm29609Q3UU56 907 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 Gtf3c2Q8BL74 907 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 Prss23Q9D6X6 382 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 Hs6st3Q9QYK4 470 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 SynrgQ5SV85 1306 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 Magea4F2Z493 315 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 Eef1bO70251 225 aaKnown RBP17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 Zscan2Q07230 614 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 Cnga4Q3UW12 575 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 RilpQ5ND29 369 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 Cnot7Q60809 285 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 Acvrl1Q61288 502 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 Q6GQV0 436 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 Spata24Q6P926 205 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 E2f7Q6S7F2 904 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 C2cd2lQ80X80 706 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 Heatr3Q8BQM4 679 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 Pls3Q99K51 630 aa17.17■□□□□ 0.34
Trim28-201ENSMUST00000005705 GrapQ9CX99 217 aa17.17■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms