RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI1YPL016W YIF1P53845 314 aaKnown RBP3.3□□□□□ -1.88
SWI1YPL016W DPP1Q05521 289 aa3.3□□□□□ -1.88
SWI1YPL016W VTS1Q08831 523 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
SWI1YPL016W MHF2Q3E829 80 aa3.3□□□□□ -1.88
SWI1YPL016W SAG1P20840 650 aa3.3□□□□□ -1.88
SWI1YPL016W SLY41P22215 453 aa3.3□□□□□ -1.88
SWI1YPL016W PRE2P30656 287 aaKnown RBP3.3□□□□□ -1.88
SWI1YPL016W ATS1P31386 333 aa3.3□□□□□ -1.88
SWI1YPL016W ERG24P32462 438 aaKnown RBP3.3□□□□□ -1.88
SWI1YPL016W YHL044WP38727 235 aa3.3□□□□□ -1.88
SWI1YPL016W VPS52P39904 641 aa3.3□□□□□ -1.88
SWI1YPL016W GLC8P41818 229 aa3.3□□□□□ -1.88
SWI1YPL016W GAT1P43574 510 aa3.3□□□□□ -1.88
SWI1YPL016W YJR015WP47090 510 aa3.3□□□□□ -1.88
SWI1YPL016W ADD37Q03233 198 aa3.3□□□□□ -1.88
SWI1YPL016W PRM3Q08931 133 aa3.3□□□□□ -1.88
SWI1YPL016W COX19Q3E731 98 aa3.3□□□□□ -1.88
SWI1YPL016W SOD2P00447 233 aa3.3□□□□□ -1.88
SWI1YPL016W ILV5P06168 395 aaKnown RBP3.3□□□□□ -1.88
SWI1YPL016W RAD23P32628 398 aaKnown RBP3.3□□□□□ -1.88
SWI1YPL016W SDS24P38314 527 aa3.3□□□□□ -1.88
SWI1YPL016W ASP1P38986 381 aaPredicted RBP3.3□□□□□ -1.88
SWI1YPL016W NIT1P40447 199 aa3.3□□□□□ -1.88
SWI1YPL016W AIR1P40507 360 aaKnown RBP3.3□□□□□ -1.88
SWI1YPL016W CDC55Q00362 526 aa3.3□□□□□ -1.88
SWI1YPL016W MRP51Q02950 344 aa3.3□□□□□ -1.88
SWI1YPL016W YMR087WQ04299 284 aa3.3□□□□□ -1.88
SWI1YPL016W USB1Q12208 290 aaKnown RBP3.3□□□□□ -1.88
SWI1YPL016W PRS5Q12265 496 aaKnown RBP3.3□□□□□ -1.88
SWI1YPL016W PDH1Q12428 516 aaKnown RBP3.3□□□□□ -1.88
SWI1YPL016W YCR025CP25352 136 aa3.29□□□□□ -1.88
SWI1YPL016W OAC1P32332 324 aa3.29□□□□□ -1.88
SWI1YPL016W CDC5P32562 705 aa3.29□□□□□ -1.88
SWI1YPL016W SHE1P38200 338 aa3.29□□□□□ -1.88
SWI1YPL016W TES1P41903 349 aaKnown RBP3.29□□□□□ -1.88
SWI1YPL016W ADO1P47143 340 aaKnown RBP3.29□□□□□ -1.88
SWI1YPL016W YNR061CP53747 219 aa3.29□□□□□ -1.88
SWI1YPL016W ALG9P53868 555 aaKnown RBP3.29□□□□□ -1.88
SWI1YPL016W GIS1Q03833 894 aa3.29□□□□□ -1.88
SWI1YPL016W COQ11Q05892 277 aa3.29□□□□□ -1.88
SWI1YPL016W YLR446WQ06204 433 aa3.29□□□□□ -1.88
SWI1YPL016W CTS2Q06350 511 aa3.29□□□□□ -1.88
SWI1YPL016W STP4Q07351 490 aa3.29□□□□□ -1.88
SWI1YPL016W ATG10Q07879 167 aa3.29□□□□□ -1.88
SWI1YPL016W TGL5Q12043 749 aa3.29□□□□□ -1.88
SWI1YPL016W SWM1Q12379 170 aa3.29□□□□□ -1.88
SWI1YPL016W ISA2Q12425 185 aa3.29□□□□□ -1.88
SWI1YPL016W RAX2Q12465 1220 aa3.29□□□□□ -1.88
SWI1YPL016W THP2O13539 261 aaKnown RBP3.29□□□□□ -1.88
SWI1YPL016W EPT1P22140 391 aa3.29□□□□□ -1.88
SWI1YPL016W IKS1P47042 667 aa3.29□□□□□ -1.88
SWI1YPL016W YNL134CP53912 376 aaKnown RBP3.29□□□□□ -1.88
SWI1YPL016W YMR166CQ03829 368 aa3.29□□□□□ -1.88
SWI1YPL016W PPN1Q04119 674 aa3.29□□□□□ -1.88
SWI1YPL016W ERP1Q05359 219 aaKnown RBP3.29□□□□□ -1.88
SWI1YPL016W ERV2Q12284 196 aa3.29□□□□□ -1.88
SWI1YPL016W YLR118CQ12354 227 aa3.29□□□□□ -1.88
SWI1YPL016W RDI1Q12434 202 aa3.29□□□□□ -1.88
SWI1YPL016W PHO85P17157 305 aa3.29□□□□□ -1.88
SWI1YPL016W AGP1P25376 633 aa3.29□□□□□ -1.88
SWI1YPL016W YPT53P36019 220 aa3.29□□□□□ -1.88
SWI1YPL016W MCH2P36032 473 aa3.29□□□□□ -1.88
SWI1YPL016W SMD3P43321 101 aaKnown RBP3.29□□□□□ -1.88
SWI1YPL016W RPA34P47006 233 aaPredicted RBP3.29□□□□□ -1.88
SWI1YPL016W CSM4Q08955 156 aa3.29□□□□□ -1.88
SWI1YPL016W SLO1Q3E784 85 aa3.29□□□□□ -1.88
SWI1YPL016W RPS4AP0CX35 261 aaKnown RBP3.28□□□□□ -1.88
SWI1YPL016W RPS4BP0CX36 261 aaKnown RBP3.28□□□□□ -1.88
SWI1YPL016W MET22P32179 357 aa3.28□□□□□ -1.88
SWI1YPL016W COT1P32798 439 aa3.28□□□□□ -1.88
SWI1YPL016W TRS65P32893 560 aa3.28□□□□□ -1.88
SWI1YPL016W UPS2P35200 230 aa3.28□□□□□ -1.88
SWI1YPL016W MRPL11P36521 249 aaPredicted RBP3.28□□□□□ -1.88
SWI1YPL016W ELO1P39540 310 aa3.28□□□□□ -1.88
SWI1YPL016W YIR016WP40572 265 aa3.28□□□□□ -1.88
SWI1YPL016W OYE3P41816 400 aaPredicted RBP3.28□□□□□ -1.88
SWI1YPL016W YJL007CP47080 104 aa3.28□□□□□ -1.88
SWI1YPL016W YIP5P53108 310 aa3.28□□□□□ -1.88
SWI1YPL016W MRX8Q05473 314 aa3.28□□□□□ -1.88
SWI1YPL016W STP3Q05937 343 aa3.28□□□□□ -1.88
SWI1YPL016W PIN3Q06449 215 aa3.28□□□□□ -1.88
SWI1YPL016W HEM25Q07534 307 aa3.28□□□□□ -1.88
SWI1YPL016W MCP1Q12106 302 aa3.28□□□□□ -1.88
SWI1YPL016W ICT1Q12385 394 aa3.28□□□□□ -1.88
SWI1YPL016W PAR32Q12515 295 aaKnown RBP3.28□□□□□ -1.88
SWI1YPL016W YLR099W-AQ3E798 87 aa3.28□□□□□ -1.88
SWI1YPL016W MSW1P04803 379 aa3.28□□□□□ -1.88
SWI1YPL016W PUP3P25451 205 aaKnown RBP3.28□□□□□ -1.88
SWI1YPL016W HSP10P38910 106 aa3.28□□□□□ -1.88
SWI1YPL016W YER076CP40049 302 aa3.28□□□□□ -1.88
SWI1YPL016W POG1P40473 351 aa3.28□□□□□ -1.88
SWI1YPL016W PEX29Q03370 554 aa3.28□□□□□ -1.88
SWI1YPL016W STE7P06784 515 aa3.28□□□□□ -1.88
SWI1YPL016W CBS1P14066 229 aa3.28□□□□□ -1.88
SWI1YPL016W ERG28P40030 148 aa3.28□□□□□ -1.88
SWI1YPL016W ARP3P47117 449 aaKnown RBP3.28□□□□□ -1.88
SWI1YPL016W TIM10P87108 93 aa3.28□□□□□ -1.88
SWI1YPL016W FCF1Q05498 189 aaPredicted RBP3.28□□□□□ -1.88
SWI1YPL016W ERF2Q06551 359 aa3.28□□□□□ -1.88
SWI1YPL016W YPR027CQ12079 277 aa3.28□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms