RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeastyeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC39YLR440C RAD28Q12021 506 aa4.52□□□□□ -1.69
SEC39YLR440C RPL13AQ12690 199 aaPredicted RBP4.52□□□□□ -1.69
SEC39YLR440C YKR104WP0CE69 306 aa4.52□□□□□ -1.69
SEC39YLR440C TIR1P10863 254 aa4.52□□□□□ -1.69
SEC39YLR440C PHO88P38264 188 aaPredicted RBP4.52□□□□□ -1.69
SEC39YLR440C ELO1P39540 310 aa4.52□□□□□ -1.69
SEC39YLR440C YGR168CP53293 376 aa4.52□□□□□ -1.69
SEC39YLR440C YNR014WP53719 212 aa4.52□□□□□ -1.69
SEC39YLR440C YNR071CP53757 342 aa4.52□□□□□ -1.69
SEC39YLR440C HHT1P61830 136 aa4.52□□□□□ -1.69
SEC39YLR440C YMR320WQ04897 101 aa4.52□□□□□ -1.69
SEC39YLR440C YOR342CQ12182 319 aa4.52□□□□□ -1.69
SEC39YLR440C TY1A-DR4O74302 440 aa4.51□□□□□ -1.69
SEC39YLR440C RPL28P02406 149 aaKnown RBP4.51□□□□□ -1.69
SEC39YLR440C SGA1P08019 549 aa4.51□□□□□ -1.69
SEC39YLR440C TY1A-LR4P0C2I8 440 aaKnown RBP4.51□□□□□ -1.69
SEC39YLR440C YER039C-AP0CD97 72 aa4.51□□□□□ -1.69
SEC39YLR440C TY1A-AP0CX57 440 aa4.51□□□□□ -1.69
SEC39YLR440C TY1A-PR1P0CX58 440 aa4.51□□□□□ -1.69
SEC39YLR440C TY1A-DR5P0CX65 440 aa4.51□□□□□ -1.69
SEC39YLR440C TY1A-ER2P0CX66 440 aa4.51□□□□□ -1.69
SEC39YLR440C TY1A-GR3P0CX67 440 aa4.51□□□□□ -1.69
SEC39YLR440C TY1A-LR1P0CX68 440 aa4.51□□□□□ -1.69
SEC39YLR440C TY1A-MR2P0CX69 440 aa4.51□□□□□ -1.69
SEC39YLR440C TY1A-DR6P0CX70 440 aa4.51□□□□□ -1.69
SEC39YLR440C TY1A-ER1P0CX71 440 aa4.51□□□□□ -1.69
SEC39YLR440C TY1A-LR2P0CX72 440 aa4.51□□□□□ -1.69
SEC39YLR440C TY1A-PLP0CX73 440 aa4.51□□□□□ -1.69
SEC39YLR440C TY1A-JR1P0CX74 440 aa4.51□□□□□ -1.69
SEC39YLR440C TY1A-LR3P0CX75 440 aa4.51□□□□□ -1.69
SEC39YLR440C TY1A-ML2P0CX76 440 aa4.51□□□□□ -1.69
SEC39YLR440C AMD1P15274 810 aaKnown RBP4.51□□□□□ -1.69
SEC39YLR440C RPB5P20434 215 aa4.51□□□□□ -1.69
SEC39YLR440C RIM1P32445 135 aaKnown RBP4.51□□□□□ -1.69
SEC39YLR440C MUD1P32605 298 aaKnown RBP4.51□□□□□ -1.69
SEC39YLR440C YET1P35723 206 aa4.51□□□□□ -1.69
SEC39YLR440C TSL1P38427 1098 aaKnown RBP4.51□□□□□ -1.69
SEC39YLR440C YGP1P38616 354 aaKnown RBP4.51□□□□□ -1.69
SEC39YLR440C HPA3P39979 161 aa4.51□□□□□ -1.69
SEC39YLR440C TY1A-JR2P47099 440 aa4.51□□□□□ -1.69
SEC39YLR440C CPR7P47103 393 aa4.51□□□□□ -1.69
SEC39YLR440C CTR1P49573 406 aa4.51□□□□□ -1.69
SEC39YLR440C SUR7P54003 302 aa4.51□□□□□ -1.69
SEC39YLR440C TY1A-DR1Q03856 440 aa4.51□□□□□ -1.69
SEC39YLR440C TY1A-ML1Q04706 440 aaKnown RBP4.51□□□□□ -1.69
SEC39YLR440C MRX8Q05473 314 aa4.51□□□□□ -1.69
SEC39YLR440C YPR202WQ08993 238 aa4.51□□□□□ -1.69
SEC39YLR440C TY1A-GR1Q12085 440 aa4.51□□□□□ -1.69
SEC39YLR440C SIA1Q12212 622 aa4.51□□□□□ -1.69
SEC39YLR440C PST1Q12355 444 aa4.51□□□□□ -1.69
SEC39YLR440C TY1A-DR3Q12441 440 aa4.51□□□□□ -1.69
SEC39YLR440C TY1A-NL2Q12470 440 aa4.51□□□□□ -1.69
SEC39YLR440C TY1A-GR2Q12485 440 aa4.51□□□□□ -1.69
SEC39YLR440C TY1A-PR3Q6Q5H1 440 aaKnown RBP4.51□□□□□ -1.69
SEC39YLR440C TY1A-OLQ92392 440 aaKnown RBP4.51□□□□□ -1.69
SEC39YLR440C DET1Q99288 334 aaKnown RBP4.51□□□□□ -1.69
SEC39YLR440C COX3P00420 269 aa4.51□□□□□ -1.69
SEC39YLR440C STE7P06784 515 aa4.51□□□□□ -1.69
SEC39YLR440C FEN2P25621 512 aaKnown RBP4.51□□□□□ -1.69
SEC39YLR440C GLE2P40066 365 aa4.51□□□□□ -1.69
SEC39YLR440C FAR3P46671 204 aa4.51□□□□□ -1.69
SEC39YLR440C IRC18P47056 224 aa4.51□□□□□ -1.69
SEC39YLR440C CRZ1P53968 678 aa4.51□□□□□ -1.69
SEC39YLR440C NAM8Q00539 523 aaKnown RBP4.51□□□□□ -1.69
SEC39YLR440C YML018CQ03730 393 aa4.51□□□□□ -1.69
SEC39YLR440C TDA6Q06466 467 aa4.51□□□□□ -1.69
SEC39YLR440C LCB4Q12246 624 aa4.51□□□□□ -1.69
SEC39YLR440C ERP3Q12403 225 aa4.51□□□□□ -1.69
SEC39YLR440C YLR422WQ06409 1932 aa4.5□□□□□ -1.69
SEC39YLR440C HIS1P00498 297 aaKnown RBP4.5□□□□□ -1.69
SEC39YLR440C TY1A-ORP0CX59 440 aa4.5□□□□□ -1.69
SEC39YLR440C TY1A-PR2P0CX60 440 aa4.5□□□□□ -1.69
SEC39YLR440C RPP1BP10622 106 aaKnown RBP4.5□□□□□ -1.69
SEC39YLR440C PHO85P17157 305 aa4.5□□□□□ -1.69
SEC39YLR440C NAB2P32505 525 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
SEC39YLR440C FMT1P32785 401 aa4.5□□□□□ -1.69
SEC39YLR440C TOD6P34219 525 aa4.5□□□□□ -1.69
SEC39YLR440C SRY1P36007 326 aa4.5□□□□□ -1.69
SEC39YLR440C EHT1P38295 451 aa4.5□□□□□ -1.69
SEC39YLR440C NSG1P38837 291 aa4.5□□□□□ -1.69
SEC39YLR440C YMR144WP40214 342 aaKnown RBP4.5□□□□□ -1.69
SEC39YLR440C YJR015WP47090 510 aa4.5□□□□□ -1.69
SEC39YLR440C BUL1P48524 976 aa4.5□□□□□ -1.69
SEC39YLR440C TIM13P53299 105 aa4.5□□□□□ -1.69
SEC39YLR440C MTM1P53320 366 aa4.5□□□□□ -1.69
SEC39YLR440C SEC13Q04491 297 aaKnown RBP4.5□□□□□ -1.69
SEC39YLR440C SEN15Q04675 128 aa4.5□□□□□ -1.69
SEC39YLR440C YOL073CQ08232 322 aa4.5□□□□□ -1.69
SEC39YLR440C WTM2Q12206 467 aa4.5□□□□□ -1.69
SEC39YLR440C YDR461C-AQ2V2P7 80 aa4.5□□□□□ -1.69
SEC39YLR440C YDR524C-BQ3E6R4 66 aa4.5□□□□□ -1.69
SEC39YLR440C YDR034W-BQ6Q5X2 51 aa4.5□□□□□ -1.69
SEC39YLR440C COX4P04037 155 aa4.49□□□□□ -1.69
SEC39YLR440C UBI4P0CG63 381 aaKnown RBP4.49□□□□□ -1.69
SEC39YLR440C BAR1P12630 587 aa4.49□□□□□ -1.69
SEC39YLR440C VMA3P25515 160 aa4.49□□□□□ -1.69
SEC39YLR440C YIH1P25637 258 aa4.49□□□□□ -1.69
SEC39YLR440C NUP2P32499 720 aa4.49□□□□□ -1.69
SEC39YLR440C MCR1P36060 302 aaKnown RBP4.49□□□□□ -1.69
SEC39YLR440C LSM2P38203 95 aaKnown RBP4.49□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms