RNA–Protein interactions for RNA: YDR097C

MSH6, Transcript of Protein required for mismatch repair in mitosis and meiosis, yeastyeast

Gene MSH6, Length 3,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH6YDR097C DIE2P50076 525 aa1.49□□□□□ -2.17
MSH6YDR097C NRM1P53718 249 aa1.49□□□□□ -2.17
MSH6YDR097C CUS2P53830 285 aaPredicted RBP1.49□□□□□ -2.17
MSH6YDR097C SSQ1Q05931 657 aaPredicted RBP1.49□□□□□ -2.17
MSH6YDR097C SEC10Q06245 871 aa1.49□□□□□ -2.17
MSH6YDR097C DTD1Q07648 150 aaKnown RBP1.49□□□□□ -2.17
MSH6YDR097C PPT2Q12036 173 aa1.49□□□□□ -2.17
MSH6YDR097C ATP16Q12165 160 aa1.49□□□□□ -2.17
MSH6YDR097C CDC33P07260 213 aaKnown RBP1.48□□□□□ -2.17
MSH6YDR097C DAL82P21705 255 aa1.48□□□□□ -2.17
MSH6YDR097C MEI4P29467 408 aa1.48□□□□□ -2.17
MSH6YDR097C MGM101P32787 269 aaKnown RBP1.48□□□□□ -2.17
MSH6YDR097C UTP30P36144 274 aaKnown RBP1.48□□□□□ -2.17
MSH6YDR097C MRPL27P36526 146 aaPredicted RBP1.48□□□□□ -2.17
MSH6YDR097C COX14P39103 70 aa1.48□□□□□ -2.17
MSH6YDR097C YJL213WP40896 331 aa1.48□□□□□ -2.17
MSH6YDR097C YGR018CP53211 109 aa1.48□□□□□ -2.17
MSH6YDR097C GTO3Q04806 366 aa1.48□□□□□ -2.17
MSH6YDR097C SPC2Q04969 178 aa1.48□□□□□ -2.17
MSH6YDR097C YTH1Q06102 208 aaPredicted RBP1.48□□□□□ -2.17
MSH6YDR097C RIF2Q06208 395 aa1.48□□□□□ -2.17
MSH6YDR097C YNG1Q08465 219 aa1.48□□□□□ -2.17
MSH6YDR097C YOR292CQ08743 309 aa1.48□□□□□ -2.17
MSH6YDR097C ILV1P00927 576 aaKnown RBP1.48□□□□□ -2.17
MSH6YDR097C PIS1P06197 220 aaKnown RBP1.48□□□□□ -2.17
MSH6YDR097C STE7P06784 515 aa1.48□□□□□ -2.17
MSH6YDR097C NHP6BP11633 99 aaKnown RBP1.48□□□□□ -2.17
MSH6YDR097C CPR4P25334 318 aa1.48□□□□□ -2.17
MSH6YDR097C RPL16AP26784 199 aaKnown RBP1.48□□□□□ -2.17
MSH6YDR097C YKL063CP35725 167 aa1.48□□□□□ -2.17
MSH6YDR097C YHI9P38765 294 aa1.48□□□□□ -2.17
MSH6YDR097C PEX22P39718 180 aa1.48□□□□□ -2.17
MSH6YDR097C RPA43P46669 326 aa1.48□□□□□ -2.17
MSH6YDR097C BIR1P47134 954 aa1.48□□□□□ -2.17
MSH6YDR097C VMA10P48836 114 aaKnown RBP1.48□□□□□ -2.17
MSH6YDR097C HSH155P49955 971 aaKnown RBP1.48□□□□□ -2.17
MSH6YDR097C RMR1P53060 241 aa1.48□□□□□ -2.17
MSH6YDR097C NOP19P53317 196 aaPredicted RBP1.48□□□□□ -2.17
MSH6YDR097C MRPL50P53724 139 aa1.48□□□□□ -2.17
MSH6YDR097C NOP13P53883 403 aaKnown RBP RIP-Chip data1.48□□□□□ -2.17not detected
MSH6YDR097C TVP15Q03860 143 aa1.48□□□□□ -2.17
MSH6YDR097C SNX41Q04053 625 aa1.48□□□□□ -2.17
MSH6YDR097C BNA7Q04066 261 aa1.48□□□□□ -2.17
MSH6YDR097C MHR1Q06630 226 aa1.48□□□□□ -2.17
MSH6YDR097C GRE1Q08969 168 aa1.48□□□□□ -2.17
MSH6YDR097C LAG2Q92325 660 aa1.48□□□□□ -2.17
MSH6YDR097C IRA2P19158 3079 aa1.48□□□□□ -2.17
MSH6YDR097C BCY1P07278 416 aaKnown RBP1.48□□□□□ -2.17
MSH6YDR097C CPR3P25719 182 aa1.48□□□□□ -2.17
MSH6YDR097C INO2P26798 304 aa1.48□□□□□ -2.17
MSH6YDR097C CSE2P33308 149 aa1.48□□□□□ -2.17
MSH6YDR097C PTC1P35182 281 aa1.48□□□□□ -2.17
MSH6YDR097C NAT2P37293 288 aa1.48□□□□□ -2.17
MSH6YDR097C PHO89P38361 574 aa1.48□□□□□ -2.17
MSH6YDR097C YIL029CP40538 142 aa1.48□□□□□ -2.17
MSH6YDR097C YFH7P43591 353 aa1.48□□□□□ -2.17
MSH6YDR097C MIC26P50087 233 aa1.48□□□□□ -2.17
MSH6YDR097C MGA1P53050 456 aa1.48□□□□□ -2.17
MSH6YDR097C CPD1P53314 239 aa1.48□□□□□ -2.17
MSH6YDR097C SEC13Q04491 297 aaKnown RBP1.48□□□□□ -2.17
MSH6YDR097C NDE2Q07500 545 aa1.48□□□□□ -2.17
MSH6YDR097C YPL245WQ12179 454 aaKnown RBP1.48□□□□□ -2.17
MSH6YDR097C PCL9Q12477 304 aa1.48□□□□□ -2.17
MSH6YDR097C TRP1P00912 224 aa1.47□□□□□ -2.17
MSH6YDR097C CBP6P07253 162 aaPredicted RBP1.47□□□□□ -2.17
MSH6YDR097C VMA6P32366 345 aaKnown RBP1.47□□□□□ -2.17
MSH6YDR097C PFS1P38872 237 aa1.47□□□□□ -2.17
MSH6YDR097C PET8P38921 284 aa1.47□□□□□ -2.17
MSH6YDR097C AVT2P39981 480 aa1.47□□□□□ -2.17
MSH6YDR097C KRE29P40026 464 aa1.47□□□□□ -2.17
MSH6YDR097C YFR057WP43625 151 aa1.47□□□□□ -2.17
MSH6YDR097C YJR141WP47172 347 aaPredicted RBP1.47□□□□□ -2.17
MSH6YDR097C MRH4P53166 561 aa1.47□□□□□ -2.17
MSH6YDR097C SHY1P53266 389 aa1.47□□□□□ -2.17
MSH6YDR097C GTR2P53290 341 aa1.47□□□□□ -2.17
MSH6YDR097C COG5P53951 403 aa1.47□□□□□ -2.17
MSH6YDR097C YLR152CP54072 576 aa1.47□□□□□ -2.17
MSH6YDR097C TIM8P57744 87 aa1.47□□□□□ -2.17
MSH6YDR097C SLT2Q00772 484 aa1.47□□□□□ -2.17
MSH6YDR097C VHS1Q03785 461 aa1.47□□□□□ -2.17
MSH6YDR097C DYN3Q04949 312 aa1.47□□□□□ -2.17
MSH6YDR097C PAL1Q05518 499 aaKnown RBP1.47□□□□□ -2.17
MSH6YDR097C CTR3Q06686 241 aa1.47□□□□□ -2.17
MSH6YDR097C MMT2Q08970 484 aa1.47□□□□□ -2.17
MSH6YDR097C YDL109CQ12103 647 aa1.47□□□□□ -2.17
MSH6YDR097C RRP42Q12277 265 aaPredicted RBP1.47□□□□□ -2.17
MSH6YDR097C HRT3Q12347 344 aa1.47□□□□□ -2.17
MSH6YDR097C ICT1Q12385 394 aa1.47□□□□□ -2.17
MSH6YDR097C GTT2Q12390 233 aa1.47□□□□□ -2.17
MSH6YDR097C YMR030W-AQ3E760 96 aa1.47□□□□□ -2.17
MSH6YDR097C SLH1P53327 1967 aaKnown RBP1.47□□□□□ -2.17
MSH6YDR097C URA2P07259 2214 aaKnown RBP1.47□□□□□ -2.17
MSH6YDR097C PPH21P23594 369 aa1.47□□□□□ -2.17
MSH6YDR097C RPB9P27999 122 aa1.47□□□□□ -2.17
MSH6YDR097C LDS1P31379 325 aa1.47□□□□□ -2.17
MSH6YDR097C IES6P32617 166 aa1.47□□□□□ -2.17
MSH6YDR097C CSG2P35206 410 aa1.47□□□□□ -2.17
MSH6YDR097C SRY1P36007 326 aa1.47□□□□□ -2.17
MSH6YDR097C YIL054WP40524 105 aa1.47□□□□□ -2.17
MSH6YDR097C CWC23P52868 283 aaPredicted RBP1.47□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms