RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 ZNF592Q92610 1267 aa18.97■□□□□ 0.63
PHGDH-232ENST00000641947 ADAMTS1Q9UHI8 967 aa18.97■□□□□ 0.63
PHGDH-232ENST00000641947 NENFQ9UMX5 172 aa18.97■□□□□ 0.63
PHGDH-232ENST00000641947 PCDHA13Q9Y5I0 950 aa18.97■□□□□ 0.63
PHGDH-232ENST00000641947 LACTBL1A8MY62 500 aa18.96■□□□□ 0.63
PHGDH-232ENST00000641947 B4GALT4O60513 344 aa18.96■□□□□ 0.63
PHGDH-232ENST00000641947 NPTXRO95502 500 aa18.96■□□□□ 0.63
PHGDH-232ENST00000641947 CST3P01034 146 aaPredicted RBP18.96■□□□□ 0.63
PHGDH-232ENST00000641947 NFICP08651 508 aa18.96■□□□□ 0.63
PHGDH-232ENST00000641947 CLTAP09496 248 aa18.96■□□□□ 0.63
PHGDH-232ENST00000641947 VAV2P52735 878 aa18.96■□□□□ 0.63
PHGDH-232ENST00000641947 CRYBB1P53674 252 aaPredicted RBP18.96■□□□□ 0.63
PHGDH-232ENST00000641947 SLC18A3Q16572 532 aa18.96■□□□□ 0.63
PHGDH-232ENST00000641947 SLC10A6Q3KNW5 377 aa18.96■□□□□ 0.63
PHGDH-232ENST00000641947 TRAPPC11Q7Z392 1133 aa18.96■□□□□ 0.63
PHGDH-232ENST00000641947 NME8Q8N427 588 aa18.96■□□□□ 0.63
PHGDH-232ENST00000641947 LNX1Q8TBB1 728 aaPredicted RBP18.96■□□□□ 0.63
PHGDH-232ENST00000641947 SHC3Q92529 594 aa18.96■□□□□ 0.63
PHGDH-232ENST00000641947 RPF1Q9H9Y2 349 aaKnown RBP18.96■□□□□ 0.63
PHGDH-232ENST00000641947 TRIM17Q9Y577 477 aa18.96■□□□□ 0.63
PHGDH-232ENST00000641947 DUSP10Q9Y6W6 482 aa18.96■□□□□ 0.63
PHGDH-232ENST00000641947 ZC3H11AO75152 810 aaKnown RBP eCLIP18.96■□□□□ 0.63
PHGDH-232ENST00000641947 ACLYP53396 1101 aa18.96■□□□□ 0.63
PHGDH-232ENST00000641947 MRPS6P82932 125 aaKnown RBP18.96■□□□□ 0.63
PHGDH-232ENST00000641947 NCOA4Q13772 614 aa18.96■□□□□ 0.63
PHGDH-232ENST00000641947 ARHGAP29Q52LW3 1261 aa18.96■□□□□ 0.63
PHGDH-232ENST00000641947 ZNF662Q6ZS27 426 aa18.96■□□□□ 0.63
PHGDH-232ENST00000641947 KIAA1328Q86T90 577 aa18.96■□□□□ 0.63
PHGDH-232ENST00000641947 DNAAF5Q86Y56 855 aa18.96■□□□□ 0.63
PHGDH-232ENST00000641947 FAM71AQ8IYT1 594 aa18.96■□□□□ 0.63
PHGDH-232ENST00000641947 PCSK9Q8NBP7 692 aaKnown RBP18.96■□□□□ 0.63
PHGDH-232ENST00000641947 SH3TC2Q8TF17 1288 aa18.96■□□□□ 0.63
PHGDH-232ENST00000641947 JAKMIP2Q96AA8 810 aa18.96■□□□□ 0.63
PHGDH-232ENST00000641947 IFIH1Q9BYX4 1025 aaKnown RBP18.96■□□□□ 0.63
PHGDH-232ENST00000641947 CELF4Q9BZC1 486 aaKnown RBP18.96■□□□□ 0.63
PHGDH-232ENST00000641947 ACP6Q9NPH0 428 aa18.96■□□□□ 0.63
PHGDH-232ENST00000641947 R3HCC1Q9Y3T6 440 aaKnown RBP18.96■□□□□ 0.63
PHGDH-232ENST00000641947 SCN1AP35498 2009 aa18.95■□□□□ 0.62
PHGDH-232ENST00000641947 DDX3XO00571 662 aaKnown RBP eCLIP18.95■□□□□ 0.627e-18■■■□□ 16.8
PHGDH-232ENST00000641947 TFAMQ00059 246 aaKnown RBP18.95■□□□□ 0.62
PHGDH-232ENST00000641947 SPA17Q15506 151 aa18.95■□□□□ 0.62
PHGDH-232ENST00000641947 SURF1Q15526 300 aa18.95■□□□□ 0.62
PHGDH-232ENST00000641947 JADE1Q6IE81 842 aa18.95■□□□□ 0.62
PHGDH-232ENST00000641947 RNF180Q86T96 592 aa18.95■□□□□ 0.62
PHGDH-232ENST00000641947 FAM228AQ86W67 206 aa18.95■□□□□ 0.62
PHGDH-232ENST00000641947 SLC20A1Q8WUM9 679 aa18.95■□□□□ 0.62
PHGDH-232ENST00000641947 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.95■□□□□ 0.62
PHGDH-232ENST00000641947 OSBPL7Q9BZF2 842 aa18.95■□□□□ 0.62
PHGDH-232ENST00000641947 DNAI1Q9UI46 699 aa18.95■□□□□ 0.62
PHGDH-232ENST00000641947 NOC2LQ9Y3T9 749 aaKnown RBP18.95■□□□□ 0.62
PHGDH-232ENST00000641947 NUB1Q9Y5A7 615 aa18.95■□□□□ 0.62
PHGDH-232ENST00000641947 BZW2Q9Y6E2 419 aaKnown RBP18.95■□□□□ 0.62
PHGDH-232ENST00000641947 CDY2AQ9Y6F7 541 aa18.95■□□□□ 0.62
PHGDH-232ENST00000641947 MROH7Q68CQ1 1323 aa18.95■□□□□ 0.62
PHGDH-232ENST00000641947 KIF2AO00139 706 aaPredicted RBP18.94■□□□□ 0.62
PHGDH-232ENST00000641947 IL18RAPO95256 599 aa18.94■□□□□ 0.62
PHGDH-232ENST00000641947 GRM5P41594 1212 aa18.94■□□□□ 0.62
PHGDH-232ENST00000641947 AP3M2P53677 418 aa18.94■□□□□ 0.62
PHGDH-232ENST00000641947 MFAP3P55082 362 aa18.94■□□□□ 0.62
PHGDH-232ENST00000641947 PRMT2P55345 433 aa18.94■□□□□ 0.62
PHGDH-232ENST00000641947 GNG11P61952 73 aa18.94■□□□□ 0.62
PHGDH-232ENST00000641947 GCNT1Q02742 428 aa18.94■□□□□ 0.62
PHGDH-232ENST00000641947 MGAT3Q09327 533 aa18.94■□□□□ 0.62
PHGDH-232ENST00000641947 DUOXA2Q1HG44 320 aa18.94■□□□□ 0.62
PHGDH-232ENST00000641947 SLC27A1Q6PCB7 646 aa18.94■□□□□ 0.62
PHGDH-232ENST00000641947 PACSIN1Q9BY11 444 aa18.94■□□□□ 0.62
PHGDH-232ENST00000641947 HMX1Q9NP08 348 aaPredicted RBP18.94■□□□□ 0.62
PHGDH-232ENST00000641947 C1orf112Q9NSG2 853 aa18.94■□□□□ 0.62
PHGDH-232ENST00000641947 HES2Q9Y543 173 aa18.94■□□□□ 0.62
PHGDH-232ENST00000641947 IPO7O95373 1038 aaKnown RBP18.93■□□□□ 0.62
PHGDH-232ENST00000641947 CHRNA1P02708 482 aa18.93■□□□□ 0.62
PHGDH-232ENST00000641947 CTSHP09668 335 aa18.93■□□□□ 0.62
PHGDH-232ENST00000641947 MAGEA1P43355 309 aa18.93■□□□□ 0.62
PHGDH-232ENST00000641947 MYL6P60660 151 aa18.93■□□□□ 0.62
PHGDH-232ENST00000641947 NOP14P78316 857 aaKnown RBP18.93■□□□□ 0.62
PHGDH-232ENST00000641947 ITGA7Q13683 1181 aa18.93■□□□□ 0.62
PHGDH-232ENST00000641947 PCBP1Q15365 356 aaKnown RBP eCLIP18.93■□□□□ 0.622e-6■■■□□ 14.6
PHGDH-232ENST00000641947 DCAF4L1Q3SXM0 396 aa18.93■□□□□ 0.62
PHGDH-232ENST00000641947 CCDC122Q5T0U0 273 aa18.93■□□□□ 0.62
PHGDH-232ENST00000641947 UBXN11Q5T124 520 aa18.93■□□□□ 0.62
PHGDH-232ENST00000641947 NOTUMQ6P988 496 aa18.93■□□□□ 0.62
PHGDH-232ENST00000641947 PALB2Q86YC2 1186 aa18.93■□□□□ 0.62
PHGDH-232ENST00000641947 SLC30A5Q8TAD4 765 aa18.93■□□□□ 0.62
PHGDH-232ENST00000641947 CXorf38Q8TB03 319 aa18.93■□□□□ 0.62
PHGDH-232ENST00000641947 ADPGKQ9BRR6 497 aa18.93■□□□□ 0.62
PHGDH-232ENST00000641947 SENP6Q9GZR1 1112 aaPredicted RBP18.93■□□□□ 0.62
PHGDH-232ENST00000641947 NXF3Q9H4D5 531 aaKnown RBP18.93■□□□□ 0.62
PHGDH-232ENST00000641947 TRMT13Q9NUP7 481 aaKnown RBP18.93■□□□□ 0.62
PHGDH-232ENST00000641947 SIX4Q9UIU6 781 aa18.93■□□□□ 0.62
PHGDH-232ENST00000641947 SALL4Q9UJQ4 1053 aa18.93■□□□□ 0.62
PHGDH-232ENST00000641947 GUCA1BQ9UMX6 200 aa18.93■□□□□ 0.62
PHGDH-232ENST00000641947 PIN4Q9Y237 131 aaKnown RBP18.93■□□□□ 0.62
PHGDH-232ENST00000641947 TRPV2Q9Y5S1 764 aa18.93■□□□□ 0.62
PHGDH-232ENST00000641947 CYP26A1O43174 497 aa18.93■□□□□ 0.62
PHGDH-232ENST00000641947 PHACTR2O75167 634 aa18.93■□□□□ 0.62
PHGDH-232ENST00000641947 SGPL1O95470 568 aa18.93■□□□□ 0.62
PHGDH-232ENST00000641947 ASS1P00966 412 aaKnown RBP18.93■□□□□ 0.62
PHGDH-232ENST00000641947 CALCAP01258 141 aa18.93■□□□□ 0.62
PHGDH-232ENST00000641947 TMEM191BP0C7N4 346 aa18.93■□□□□ 0.62
PHGDH-232ENST00000641947 USP8P40818 1118 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms