RNA–Protein interactions for RNA: ENST00000641674.1

CASC19-248, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,356 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-248ENST00000641674 CST5P28325 142 aaPredicted RBP6.55□□□□□ -1.36
CASC19-248ENST00000641674 MRPL12P52815 198 aaKnown RBP6.55□□□□□ -1.36
CASC19-248ENST00000641674 GJA9P57773 515 aa6.55□□□□□ -1.36
CASC19-248ENST00000641674 SMAD3P84022 425 aaKnown RBP6.55□□□□□ -1.36
CASC19-248ENST00000641674 CNTN2Q02246 1040 aa6.55□□□□□ -1.36
CASC19-248ENST00000641674 FPGSQ05932 587 aa6.55□□□□□ -1.36
CASC19-248ENST00000641674 LAPTM5Q13571 262 aa6.55□□□□□ -1.36
CASC19-248ENST00000641674 PLEKHN1Q494U1 663 aaPredicted RBP6.55□□□□□ -1.36
CASC19-248ENST00000641674 VWA3BQ502W6 1294 aa6.55□□□□□ -1.36
CASC19-248ENST00000641674 RRP12Q5JTH9 1297 aaKnown RBP6.55□□□□□ -1.36
CASC19-248ENST00000641674 NT5DC1Q5TFE4 455 aa6.55□□□□□ -1.36
CASC19-248ENST00000641674 IQSEC1Q6DN90 963 aa6.55□□□□□ -1.36
CASC19-248ENST00000641674 CCDC129Q6ZRS4 1044 aa6.55□□□□□ -1.36
CASC19-248ENST00000641674 MFSD6Q6ZSS7 791 aa6.55□□□□□ -1.36
CASC19-248ENST00000641674 KCTD1Q719H9 257 aa6.55□□□□□ -1.36
CASC19-248ENST00000641674 ANKRD33Q7Z3H0 272 aa6.55□□□□□ -1.36
CASC19-248ENST00000641674 SLCO6A1Q86UG4 719 aa6.55□□□□□ -1.36
CASC19-248ENST00000641674 SKAP1Q86WV1 359 aa6.55□□□□□ -1.36
CASC19-248ENST00000641674 TMEM199Q8N511 208 aa6.55□□□□□ -1.36
CASC19-248ENST00000641674 KLHDC9Q8NEP7 349 aa6.55□□□□□ -1.36
CASC19-248ENST00000641674 OTUD7AQ8TE49 926 aaPredicted RBP6.55□□□□□ -1.36
CASC19-248ENST00000641674 DCAF4Q8WV16 495 aa6.55□□□□□ -1.36
CASC19-248ENST00000641674 TRIM43Q96BQ3 446 aaPredicted RBP6.55□□□□□ -1.36
CASC19-248ENST00000641674 CHMP4CQ96CF2 233 aa6.55□□□□□ -1.36
CASC19-248ENST00000641674 RNPC3Q96LT9 517 aaKnown RBP6.55□□□□□ -1.36
CASC19-248ENST00000641674 FAM161BQ96MY7 647 aa6.55□□□□□ -1.36
CASC19-248ENST00000641674 TTC14Q96N46 770 aa6.55□□□□□ -1.36
CASC19-248ENST00000641674 RNF41Q9H4P4 317 aaPredicted RBP6.55□□□□□ -1.36
CASC19-248ENST00000641674 RNF146Q9NTX7 359 aa6.55□□□□□ -1.36
CASC19-248ENST00000641674 ERVK13-1Q9NX77 482 aa6.55□□□□□ -1.36
CASC19-248ENST00000641674 ADD3Q9UEY8 706 aaKnown RBP6.55□□□□□ -1.36
CASC19-248ENST00000641674 FEZ2Q9UHY8 353 aaPredicted RBP6.55□□□□□ -1.36
CASC19-248ENST00000641674 CCPG1Q9ULG6 757 aa6.55□□□□□ -1.36
CASC19-248ENST00000641674 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.54□□□□□ -1.36
CASC19-248ENST00000641674 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.54□□□□□ -1.36
CASC19-248ENST00000641674 ARVCFO00192 962 aa6.54□□□□□ -1.36
CASC19-248ENST00000641674 HIP1O00291 1037 aa6.54□□□□□ -1.36
CASC19-248ENST00000641674 MEIS1O00470 390 aa6.54□□□□□ -1.36
CASC19-248ENST00000641674 ZNF213O14771 459 aa6.54□□□□□ -1.36
CASC19-248ENST00000641674 TIMP1P01033 207 aa6.54□□□□□ -1.36
CASC19-248ENST00000641674 PLA2G1BP04054 148 aaKnown RBP6.54□□□□□ -1.36
CASC19-248ENST00000641674 TNFRSF1AP19438 455 aa6.54□□□□□ -1.36
CASC19-248ENST00000641674 NT5C2P49902 561 aa6.54□□□□□ -1.36
CASC19-248ENST00000641674 LMNB2Q03252 620 aa6.54□□□□□ -1.36
CASC19-248ENST00000641674 PPIGQ13427 754 aaKnown RBP eCLIP6.54□□□□□ -1.363e-11■□□□□ 10.6
CASC19-248ENST00000641674 CBX2Q14781 532 aaPredicted RBP6.54□□□□□ -1.36
CASC19-248ENST00000641674 BRDTQ58F21 947 aaPredicted RBP6.54□□□□□ -1.36
CASC19-248ENST00000641674 CCDC178Q5BJE1 867 aa6.54□□□□□ -1.36
CASC19-248ENST00000641674 NSMFQ6X4W1 530 aa6.54□□□□□ -1.36
CASC19-248ENST00000641674 SDR16C5Q8N3Y7 309 aa6.54□□□□□ -1.36
CASC19-248ENST00000641674 FAM133AQ8N9E0 248 aa6.54□□□□□ -1.36
CASC19-248ENST00000641674 FBXO27Q8NI29 283 aa6.54□□□□□ -1.36
CASC19-248ENST00000641674 NOC4LQ9BVI4 516 aaKnown RBP6.54□□□□□ -1.36
CASC19-248ENST00000641674 UPF3AQ9H1J1 476 aaKnown RBP6.54□□□□□ -1.36
CASC19-248ENST00000641674 MTIF3Q9H2K0 278 aaKnown RBP6.54□□□□□ -1.36
CASC19-248ENST00000641674 A1CFQ9NQ94 594 aaKnown RBP6.54□□□□□ -1.36
CASC19-248ENST00000641674 RRAGDQ9NQL2 400 aaPredicted RBP6.54□□□□□ -1.36
CASC19-248ENST00000641674 IL17RBQ9NRM6 502 aa6.54□□□□□ -1.36
CASC19-248ENST00000641674 TCP11L1Q9NUJ3 509 aa6.54□□□□□ -1.36
CASC19-248ENST00000641674 IMPACTQ9P2X3 320 aa6.54□□□□□ -1.36
CASC19-248ENST00000641674 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.54□□□□□ -1.36
CASC19-248ENST00000641674 Q9Y3F1 56 aa6.54□□□□□ -1.36
CASC19-248ENST00000641674 HCFC2Q9Y5Z7 792 aa6.54□□□□□ -1.36
CASC19-248ENST00000641674 DNAH12Q6ZR08 3092 aa6.53□□□□□ -1.36
CASC19-248ENST00000641674 RANBP2P49792 3224 aaKnown RBP6.53□□□□□ -1.36
CASC19-248ENST00000641674 SUV39H1O43463 412 aa6.53□□□□□ -1.36
CASC19-248ENST00000641674 NMT2O60551 498 aa6.53□□□□□ -1.36
CASC19-248ENST00000641674 ICAM1P05362 532 aa6.53□□□□□ -1.36
CASC19-248ENST00000641674 FGRP09769 529 aa6.53□□□□□ -1.36
CASC19-248ENST00000641674 HSPD1P10809 573 aaKnown RBP6.53□□□□□ -1.36
CASC19-248ENST00000641674 POLR2BP30876 1174 aaKnown RBP6.53□□□□□ -1.36
CASC19-248ENST00000641674 CDK7P50613 346 aa6.53□□□□□ -1.36
CASC19-248ENST00000641674 RNF4P78317 190 aa6.53□□□□□ -1.36
CASC19-248ENST00000641674 ZXDAP98168 799 aa6.53□□□□□ -1.36
CASC19-248ENST00000641674 TMEM62Q0P6H9 643 aa6.53□□□□□ -1.36
CASC19-248ENST00000641674 MTA1Q13330 715 aa6.53□□□□□ -1.36
CASC19-248ENST00000641674 ARSHQ5FYA8 562 aa6.53□□□□□ -1.36
CASC19-248ENST00000641674 C9orf50Q5SZB4 431 aa6.53□□□□□ -1.36
CASC19-248ENST00000641674 AKNAD1Q5T1N1 836 aa6.53□□□□□ -1.36
CASC19-248ENST00000641674 VPS53Q5VIR6 699 aa6.53□□□□□ -1.36
CASC19-248ENST00000641674 SYDE2Q5VT97 1194 aa6.53□□□□□ -1.36
CASC19-248ENST00000641674 CCSAPQ6IQ19 270 aaPredicted RBP6.53□□□□□ -1.36
CASC19-248ENST00000641674 MFSD5Q6N075 450 aa6.53□□□□□ -1.36
CASC19-248ENST00000641674 BTNL9Q6UXG8 535 aa6.53□□□□□ -1.36
CASC19-248ENST00000641674 TLK2Q86UE8 772 aa6.53□□□□□ -1.36
CASC19-248ENST00000641674 IQCA1Q86XH1 822 aa6.53□□□□□ -1.36
CASC19-248ENST00000641674 ESR2Q92731 530 aa6.53□□□□□ -1.36
CASC19-248ENST00000641674 TMEM47Q9BQJ4 181 aa6.53□□□□□ -1.36
CASC19-248ENST00000641674 LNPKQ9C0E8 428 aa6.53□□□□□ -1.36
CASC19-248ENST00000641674 PRDM14Q9GZV8 571 aa6.53□□□□□ -1.36
CASC19-248ENST00000641674 VTA1Q9NP79 307 aa6.53□□□□□ -1.36
CASC19-248ENST00000641674 INCENPQ9NQS7 918 aa6.53□□□□□ -1.36
CASC19-248ENST00000641674 CYP39A1Q9NYL5 469 aa6.53□□□□□ -1.36
CASC19-248ENST00000641674 SUSD2Q9UGT4 822 aa6.53□□□□□ -1.36
CASC19-248ENST00000641674 ACSL6Q9UKU0 697 aa6.53□□□□□ -1.36
CASC19-248ENST00000641674 DUSP10Q9Y6W6 482 aa6.53□□□□□ -1.36
CASC19-248ENST00000641674 ZNF536O15090 1300 aa6.52□□□□□ -1.37
CASC19-248ENST00000641674 RAD50Q92878 1312 aa6.52□□□□□ -1.37
CASC19-248ENST00000641674 SALL3Q9BXA9 1300 aa6.52□□□□□ -1.37
CASC19-248ENST00000641674 PTPDC1A2A3K4 754 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms