RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 CCDC43Q96MW1 224 aaKnown RBP12.98□□□□□ -0.33
ERGIC3-220ENST00000640748 PRRX2Q99811 253 aa12.98□□□□□ -0.33
ERGIC3-220ENST00000640748 SH2D3AQ9BRG2 576 aa12.98□□□□□ -0.33
ERGIC3-220ENST00000640748 TRAIPQ9BWF2 469 aa12.98□□□□□ -0.33
ERGIC3-220ENST00000640748 ZBP1Q9H171 429 aa12.98□□□□□ -0.33
ERGIC3-220ENST00000640748 VPS16Q9H269 839 aa12.98□□□□□ -0.33
ERGIC3-220ENST00000640748 SMOC2Q9H3U7 446 aa12.98□□□□□ -0.33
ERGIC3-220ENST00000640748 ANKEF1Q9NU02 776 aa12.98□□□□□ -0.33
ERGIC3-220ENST00000640748 TAB2Q9NYJ8 693 aa12.98□□□□□ -0.33
ERGIC3-220ENST00000640748 SEL1LQ9UBV2 794 aa12.98□□□□□ -0.33
ERGIC3-220ENST00000640748 ZBTB39O15060 712 aa12.97□□□□□ -0.33
ERGIC3-220ENST00000640748 TEX33O43247 280 aa12.97□□□□□ -0.33
ERGIC3-220ENST00000640748 WEE2P0C1S8 567 aa12.97□□□□□ -0.33
ERGIC3-220ENST00000640748 SFPQP23246 707 aaKnown RBP eCLIP12.97□□□□□ -0.33
ERGIC3-220ENST00000640748 PHKA2P46019 1235 aa12.97□□□□□ -0.33
ERGIC3-220ENST00000640748 MTIF2P46199 727 aaKnown RBP12.97□□□□□ -0.33
ERGIC3-220ENST00000640748 ITIH3Q06033 890 aa12.97□□□□□ -0.33
ERGIC3-220ENST00000640748 PADI6Q6TGC4 694 aa12.97□□□□□ -0.33
ERGIC3-220ENST00000640748 PPP4R3CPQ6ZMV5 832 aa12.97□□□□□ -0.33
ERGIC3-220ENST00000640748 MYCT1Q8N699 235 aa12.97□□□□□ -0.33
ERGIC3-220ENST00000640748 C12orf76Q8N812 135 aaPredicted RBP12.97□□□□□ -0.33
ERGIC3-220ENST00000640748 GLIS3Q8NEA6 775 aa12.97□□□□□ -0.33
ERGIC3-220ENST00000640748 AUTS2Q8WXX7 1259 aa12.97□□□□□ -0.33
ERGIC3-220ENST00000640748 LPPQ93052 612 aa12.97□□□□□ -0.33
ERGIC3-220ENST00000640748 CNOT6LQ96LI5 555 aaKnown RBP12.97□□□□□ -0.33
ERGIC3-220ENST00000640748 RIPOR3Q96MK2 946 aa12.97□□□□□ -0.33
ERGIC3-220ENST00000640748 SCLT1Q96NL6 688 aa12.97□□□□□ -0.33
ERGIC3-220ENST00000640748 TIPINQ9BVW5 301 aa12.97□□□□□ -0.33
ERGIC3-220ENST00000640748 VN1R3Q9BXE9 311 aa12.97□□□□□ -0.33
ERGIC3-220ENST00000640748 MRPL9Q9BYD2 267 aaKnown RBP12.97□□□□□ -0.33
ERGIC3-220ENST00000640748 PARVGQ9HBI0 331 aa12.97□□□□□ -0.33
ERGIC3-220ENST00000640748 CHST12Q9NRB3 414 aa12.97□□□□□ -0.33
ERGIC3-220ENST00000640748 OLFML3Q9NRN5 406 aa12.97□□□□□ -0.33
ERGIC3-220ENST00000640748 FAM86C1Q9NVL1 165 aa12.97□□□□□ -0.33
ERGIC3-220ENST00000640748 UBE4BO95155 1302 aa12.96□□□□□ -0.33
ERGIC3-220ENST00000640748 ITIH6Q6UXX5 1313 aa12.96□□□□□ -0.33
ERGIC3-220ENST00000640748 A0A087WZ62 844 aa12.96□□□□□ -0.33
ERGIC3-220ENST00000640748 EIF3DO15371 548 aaKnown RBP eCLIP12.96□□□□□ -0.33
ERGIC3-220ENST00000640748 CXCL14O95715 111 aa12.96□□□□□ -0.33
ERGIC3-220ENST00000640748 EPCAMP16422 314 aa12.96□□□□□ -0.33
ERGIC3-220ENST00000640748 YWHABP31946 246 aaKnown RBP12.96□□□□□ -0.33
ERGIC3-220ENST00000640748 CLCN1P35523 988 aa12.96□□□□□ -0.33
ERGIC3-220ENST00000640748 PBX1P40424 430 aa12.96□□□□□ -0.33
ERGIC3-220ENST00000640748 ALDH7A1P49419 539 aaKnown RBP12.96□□□□□ -0.33
ERGIC3-220ENST00000640748 RARRES1P49788 294 aa12.96□□□□□ -0.33
ERGIC3-220ENST00000640748 ZNF131P52739 623 aa12.96□□□□□ -0.33
ERGIC3-220ENST00000640748 LRMPQ12912 555 aa12.96□□□□□ -0.33
ERGIC3-220ENST00000640748 TBX2Q13207 712 aaPredicted RBP12.96□□□□□ -0.33
ERGIC3-220ENST00000640748 BMT2Q1RMZ1 405 aa12.96□□□□□ -0.33
ERGIC3-220ENST00000640748 MTERF2Q49AM1 385 aa12.96□□□□□ -0.33
ERGIC3-220ENST00000640748 XKR3Q5GH77 459 aa12.96□□□□□ -0.33
ERGIC3-220ENST00000640748 STXBP4Q6ZWJ1 553 aa12.96□□□□□ -0.33
ERGIC3-220ENST00000640748 EPM2AIP1Q7L775 607 aaPredicted RBP12.96□□□□□ -0.33
ERGIC3-220ENST00000640748 OTUD6AQ7L8S5 288 aa12.96□□□□□ -0.33
ERGIC3-220ENST00000640748 KSR1Q8IVT5 923 aa12.96□□□□□ -0.33
ERGIC3-220ENST00000640748 NELFCDQ8IXH7 590 aa12.96□□□□□ -0.33
ERGIC3-220ENST00000640748 VPS52Q8N1B4 723 aa12.96□□□□□ -0.33
ERGIC3-220ENST00000640748 SLC22A17Q8WUG5 538 aa12.96□□□□□ -0.33
ERGIC3-220ENST00000640748 SCFD1Q8WVM8 642 aa12.96□□□□□ -0.33
ERGIC3-220ENST00000640748 IGSF21Q96ID5 467 aa12.96□□□□□ -0.33
ERGIC3-220ENST00000640748 CEP63Q96MT8 703 aa12.96□□□□□ -0.33
ERGIC3-220ENST00000640748 NECTIN4Q96NY8 510 aa12.96□□□□□ -0.33
ERGIC3-220ENST00000640748 FDXACB1Q9BRP7 624 aaPredicted RBP12.96□□□□□ -0.33
ERGIC3-220ENST00000640748 FGFBP2Q9BYJ0 223 aa12.96□□□□□ -0.33
ERGIC3-220ENST00000640748 GCOM2Q9BZD3 368 aaPredicted RBP12.96□□□□□ -0.33
ERGIC3-220ENST00000640748 NRDE2Q9H7Z3 1164 aa12.96□□□□□ -0.33
ERGIC3-220ENST00000640748 MRPL44Q9H9J2 332 aaKnown RBP12.96□□□□□ -0.33
ERGIC3-220ENST00000640748 TBC1D13Q9NVG8 400 aa12.96□□□□□ -0.33
ERGIC3-220ENST00000640748 SEPT9Q9UHD8 586 aaPredicted RBP12.96□□□□□ -0.33
ERGIC3-220ENST00000640748 PYCARDQ9ULZ3 195 aa12.96□□□□□ -0.33
ERGIC3-220ENST00000640748 NR2E1Q9Y466 385 aa12.96□□□□□ -0.33
ERGIC3-220ENST00000640748 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.96□□□□□ -0.336e-7■■■□□ 18.4
ERGIC3-220ENST00000640748 IRAK3Q9Y616 596 aa12.96□□□□□ -0.33
ERGIC3-220ENST00000640748 MYO15AQ9UKN7 3530 aa12.95□□□□□ -0.34
ERGIC3-220ENST00000640748 LGALS16A8MUM7 142 aa12.95□□□□□ -0.34
ERGIC3-220ENST00000640748 CALUO43852 315 aaPredicted RBP12.95□□□□□ -0.34
ERGIC3-220ENST00000640748 ZNF623O75123 536 aa12.95□□□□□ -0.34
ERGIC3-220ENST00000640748 HIP1RO75146 1068 aa12.95□□□□□ -0.34
ERGIC3-220ENST00000640748 ZC3H11AO75152 810 aaKnown RBP eCLIP12.95□□□□□ -0.34
ERGIC3-220ENST00000640748 MAFO75444 373 aaPredicted RBP12.95□□□□□ -0.34
ERGIC3-220ENST00000640748 OFD1O75665 1012 aa12.95□□□□□ -0.34
ERGIC3-220ENST00000640748 GCNT3O95395 438 aa12.95□□□□□ -0.34
ERGIC3-220ENST00000640748 GALTP07902 379 aa12.95□□□□□ -0.34
ERGIC3-220ENST00000640748 TPM1P09493 284 aa12.95□□□□□ -0.34
ERGIC3-220ENST00000640748 MYBP10242 640 aa12.95□□□□□ -0.34
ERGIC3-220ENST00000640748 PRKCSHP14314 528 aaPredicted RBP12.95□□□□□ -0.34
ERGIC3-220ENST00000640748 AFF1P51825 1210 aaKnown RBP12.95□□□□□ -0.34
ERGIC3-220ENST00000640748 FKBP3Q00688 224 aaKnown RBP12.95□□□□□ -0.34
ERGIC3-220ENST00000640748 ARID5BQ14865 1188 aa12.95□□□□□ -0.34
ERGIC3-220ENST00000640748 EDRF1Q3B7T1 1238 aa12.95□□□□□ -0.34
ERGIC3-220ENST00000640748 ZCWPW2Q504Y3 356 aa12.95□□□□□ -0.34
ERGIC3-220ENST00000640748 RARS2Q5T160 578 aaKnown RBP12.95□□□□□ -0.34
ERGIC3-220ENST00000640748 ARMCX5Q6P1M9 558 aa12.95□□□□□ -0.34
ERGIC3-220ENST00000640748 ANO5Q75V66 913 aa12.95□□□□□ -0.34
ERGIC3-220ENST00000640748 DDX53Q86TM3 631 aaKnown RBP12.95□□□□□ -0.34
ERGIC3-220ENST00000640748 PPFIBP1Q86W92 1011 aa12.95□□□□□ -0.34
ERGIC3-220ENST00000640748 CCDC112Q8NEF3 446 aa12.95□□□□□ -0.34
ERGIC3-220ENST00000640748 KIAA1524Q8TCG1 905 aa12.95□□□□□ -0.34
ERGIC3-220ENST00000640748 ZNF507Q8TCN5 953 aa12.95□□□□□ -0.34
ERGIC3-220ENST00000640748 TUBGCP2Q9BSJ2 902 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms