RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 STAG2Q8N3U4 1231 aa8.71□□□□□ -1.01
NECAP1-227ENST00000640648 TOR1AIP2Q8NFQ8 470 aa8.71□□□□□ -1.01
NECAP1-227ENST00000640648 GIPC2Q8TF65 315 aa8.71□□□□□ -1.01
NECAP1-227ENST00000640648 NMD3Q96D46 503 aaKnown RBP8.71□□□□□ -1.01
NECAP1-227ENST00000640648 PRPF18Q99633 342 aaKnown RBP8.71□□□□□ -1.01
NECAP1-227ENST00000640648 AP1M1Q9BXS5 423 aa8.71□□□□□ -1.01
NECAP1-227ENST00000640648 PABPC3Q9H361 631 aaKnown RBP8.71□□□□□ -1.01
NECAP1-227ENST00000640648 PCDHA1Q9Y5I3 950 aa8.71□□□□□ -1.01
NECAP1-227ENST00000640648 ZNF609O15014 1411 aa8.71□□□□□ -1.01
NECAP1-227ENST00000640648 CROCC2H7BZ55 1655 aa8.71□□□□□ -1.01
NECAP1-227ENST00000640648 LOC102724428A0A0B4J2F2 783 aa8.71□□□□□ -1.01
NECAP1-227ENST00000640648 MEIS1O00470 390 aa8.71□□□□□ -1.01
NECAP1-227ENST00000640648 ANGPT2O15123 496 aa8.71□□□□□ -1.01
NECAP1-227ENST00000640648 RGL2O15211 777 aa8.71□□□□□ -1.01
NECAP1-227ENST00000640648 AP5Z1O43299 807 aa8.71□□□□□ -1.01
NECAP1-227ENST00000640648 NMT2O60551 498 aa8.71□□□□□ -1.01
NECAP1-227ENST00000640648 UNC5CO95185 931 aa8.71□□□□□ -1.01
NECAP1-227ENST00000640648 PGM3O95394 542 aa8.71□□□□□ -1.01
NECAP1-227ENST00000640648 ASMTLO95671 621 aa8.71□□□□□ -1.01
NECAP1-227ENST00000640648 PSMA4P25789 261 aaKnown RBP8.71□□□□□ -1.01
NECAP1-227ENST00000640648 SIK1P57059 783 aa8.71□□□□□ -1.01
NECAP1-227ENST00000640648 EXOSC10Q01780 885 aaKnown RBP8.71□□□□□ -1.01
NECAP1-227ENST00000640648 ZNF846Q147U1 533 aa8.71□□□□□ -1.01
NECAP1-227ENST00000640648 KIFC2Q96AC6 838 aa8.71□□□□□ -1.01
NECAP1-227ENST00000640648 PHACTR1Q9C0D0 580 aa8.71□□□□□ -1.01
NECAP1-227ENST00000640648 GPAMQ9HCL2 828 aa8.71□□□□□ -1.01
NECAP1-227ENST00000640648 VPS45Q9NRW7 570 aa8.71□□□□□ -1.01
NECAP1-227ENST00000640648 CEP72Q9P209 647 aa8.71□□□□□ -1.01
NECAP1-227ENST00000640648 ZNF180Q9UJW8 692 aa8.71□□□□□ -1.01
NECAP1-227ENST00000640648 TRIM17Q9Y577 477 aa8.71□□□□□ -1.01
NECAP1-227ENST00000640648 E9PCH4 1651 aa8.71□□□□□ -1.01
NECAP1-227ENST00000640648 ZNF804BA4D1E1 1349 aa8.71□□□□□ -1.02
NECAP1-227ENST00000640648 TTC26A0AVF1 554 aa8.71□□□□□ -1.02
NECAP1-227ENST00000640648 ESYT3A0FGR9 886 aa8.71□□□□□ -1.02
NECAP1-227ENST00000640648 PP2D1A8MPX8 630 aa8.71□□□□□ -1.02
NECAP1-227ENST00000640648 F8W8V4 182 aa8.71□□□□□ -1.02
NECAP1-227ENST00000640648 UBOX5O94941 541 aa8.71□□□□□ -1.02
NECAP1-227ENST00000640648 BCL10O95999 233 aa8.71□□□□□ -1.02
NECAP1-227ENST00000640648 PCNAP12004 261 aa8.71□□□□□ -1.02
NECAP1-227ENST00000640648 CD19P15391 556 aa8.71□□□□□ -1.02
NECAP1-227ENST00000640648 CARSP49589 748 aaKnown RBP8.71□□□□□ -1.02
NECAP1-227ENST00000640648 LPIN1Q14693 890 aa8.71□□□□□ -1.02
NECAP1-227ENST00000640648 TRIP10Q15642 601 aa8.71□□□□□ -1.02
NECAP1-227ENST00000640648 LUZP2Q86TE4 346 aa8.71□□□□□ -1.02
NECAP1-227ENST00000640648 ERICH1Q86X53 443 aa8.71□□□□□ -1.02
NECAP1-227ENST00000640648 SNX25Q9H3E2 840 aa8.71□□□□□ -1.02
NECAP1-227ENST00000640648 ARHGEF10LQ9HCE6 1279 aa8.71□□□□□ -1.02
NECAP1-227ENST00000640648 RABL2AQ9UBK7 228 aaPredicted RBP8.71□□□□□ -1.02
NECAP1-227ENST00000640648 ACTL7BQ9Y614 415 aa8.71□□□□□ -1.02
NECAP1-227ENST00000640648 TJP3O95049 919 aa8.71□□□□□ -1.02
NECAP1-227ENST00000640648 PRLP01236 227 aa8.71□□□□□ -1.02
NECAP1-227ENST00000640648 CYP2D6P10635 497 aa8.71□□□□□ -1.02
NECAP1-227ENST00000640648 ITIH2P19823 946 aa8.71□□□□□ -1.02
NECAP1-227ENST00000640648 FMR1Q06787 632 aaKnown RBP eCLIP8.71□□□□□ -1.02
NECAP1-227ENST00000640648 ITGA7Q13683 1181 aa8.71□□□□□ -1.02
NECAP1-227ENST00000640648 NET1Q7Z628 596 aaPredicted RBP8.71□□□□□ -1.02
NECAP1-227ENST00000640648 LRRC34Q8IZ02 419 aa8.71□□□□□ -1.02
NECAP1-227ENST00000640648 SH2D3CQ8N5H7 860 aa8.71□□□□□ -1.02
NECAP1-227ENST00000640648 NAT14Q8WUY8 206 aa8.71□□□□□ -1.02
NECAP1-227ENST00000640648 BTBD10Q9BSF8 475 aa8.71□□□□□ -1.02
NECAP1-227ENST00000640648 PAIP1Q9H074 479 aaKnown RBP8.71□□□□□ -1.02
NECAP1-227ENST00000640648 MLXIPQ9HAP2 919 aa8.71□□□□□ -1.02
NECAP1-227ENST00000640648 FAM205CA6NFA0 338 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 TAF4O00268 1085 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 PCP11498 1178 aaKnown RBP8.7□□□□□ -1.02
NECAP1-227ENST00000640648 RCAN1P53805 252 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 INPP5AQ14642 412 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 TMED2Q15363 201 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 FIGNQ5HY92 759 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 ACAD11Q709F0 780 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 NUP93Q8N1F7 819 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 GIPC3Q8TF64 312 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 DLG3Q92796 817 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 BTBD9Q96Q07 612 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 DEPDC7Q96QD5 511 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 TRPV5Q9NQA5 729 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 COL4A3BPQ9Y5P4 624 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 KANSL1LA0AUZ9 987 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 APOL1O14791 398 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 GAS2O43903 313 aaKnown RBP8.7□□□□□ -1.02
NECAP1-227ENST00000640648 ITGA2BP08514 1039 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 PAEPP09466 180 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 TNNI1P19237 187 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 IL6STP40189 918 aaPredicted RBP8.7□□□□□ -1.02
NECAP1-227ENST00000640648 SNX16P57768 344 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 UBXN2AP68543 259 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 ZNF394Q53GI3 561 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 USPL1Q5W0Q7 1092 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 IZUMO2Q6UXV1 221 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 USP49Q70CQ1 688 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 KCTD1Q719H9 257 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 NOA1Q8NC60 698 aaKnown RBP8.7□□□□□ -1.02
NECAP1-227ENST00000640648 FLCNQ8NFG4 579 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 PYROXD1Q8WU10 500 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 SNF8Q96H20 258 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 TMEM247A6NEH6 219 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 PDE9AO76083 593 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 PORP16435 677 aaPredicted RBP8.7□□□□□ -1.02
NECAP1-227ENST00000640648 CYTH1Q15438 398 aa8.7□□□□□ -1.02
NECAP1-227ENST00000640648 SLC45A4Q5BKX6 768 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms