RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 TNNC2P02585 160 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 ZNF865P0CJ78 1059 aaPredicted RBP6.05□□□□□ -1.44
RTTN-218ENST00000640408 THPOP40225 353 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 FKBP3Q00688 224 aaKnown RBP6.05□□□□□ -1.44
RTTN-218ENST00000640408 UBXN1Q04323 297 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 DEUP1Q05D60 604 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 IKBKEQ14164 716 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 DCAF4L1Q3SXM0 396 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 ANKRD20A4Q4UJ75 823 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 ANKRD20A8PQ5CZ79 823 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 ANKRD20A2Q5SQ80 823 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 SPOUT1Q5T280 376 aaKnown RBP6.05□□□□□ -1.44
RTTN-218ENST00000640408 ANKRD20A1Q5TYW2 823 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 RASGRP2Q7LDG7 609 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 CXorf38Q8TB03 319 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 ETNPPLQ8TBG4 499 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 MRPL9Q9BYD2 267 aaKnown RBP6.05□□□□□ -1.44
RTTN-218ENST00000640408 POLR3FQ9H1D9 316 aaPredicted RBP6.05□□□□□ -1.44
RTTN-218ENST00000640408 ABCB6Q9NP58 842 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 SERTAD1Q9UHV2 236 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 PHF24Q9UPV7 400 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 PCDHA2Q9Y5H9 948 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 MCF2LO15068 1137 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 BAG2O95816 211 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 SELPP16109 830 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 ERCC5P28715 1186 aaPredicted RBP6.05□□□□□ -1.44
RTTN-218ENST00000640408 RARRES1P49788 294 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 ELAVL2Q12926 359 aaKnown RBP6.05□□□□□ -1.44
RTTN-218ENST00000640408 NNTQ13423 1086 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 CYLC2Q14093 348 aaPredicted RBP6.05□□□□□ -1.44
RTTN-218ENST00000640408 NAALADL2Q58DX5 795 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 PRAMEF19Q5SWL8 479 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 DYMQ7RTS9 669 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 RNF149Q8NC42 400 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 IL31RAQ8NI17 732 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 TNFRSF25Q93038 417 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 TSNARE1Q96NA8 513 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 NOX5Q96PH1 765 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 PLIN2Q99541 437 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 TMEM60Q9H2L4 133 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 CHST12Q9NRB3 414 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 COL20A1Q9P218 1284 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 STOML1Q9UBI4 398 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 ANKRD65E5RJM6 399 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 CLDN3O15551 220 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 PQBP1O60828 265 aaKnown RBP6.05□□□□□ -1.44
RTTN-218ENST00000640408 ESRRBO95718 433 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 SRGAP2CP0DJJ0 459 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 COL6A1P12109 1028 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 NR1D1P20393 614 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 LRRC63Q05C16 580 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 PTGISQ16647 500 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 WDR44Q5JSH3 913 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 CCDC13Q8IYE1 715 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 GUF1Q8N442 669 aaKnown RBP6.05□□□□□ -1.44
RTTN-218ENST00000640408 HSD17B14Q9BPX1 270 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 FAM167BQ9BTA0 163 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 XPO4Q9C0E2 1151 aaKnown RBP6.05□□□□□ -1.44
RTTN-218ENST00000640408 CNGB3Q9NQW8 809 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 hCG_2014768A0A024R1R8 64 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 IGLV3-22A0A075B6J6 115 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 HARSP12081 509 aaKnown RBP6.05□□□□□ -1.44
RTTN-218ENST00000640408 PLS3P13797 630 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 EIF4BP23588 611 aaKnown RBP6.05□□□□□ -1.44
RTTN-218ENST00000640408 PAX7P23759 505 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 STX2P32856 288 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 ATN1P54259 1190 aaPredicted RBP6.05□□□□□ -1.44
RTTN-218ENST00000640408 CCL14Q16627 93 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 ANKRD20A3Q5VUR7 823 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 RHPN2Q8IUC4 686 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 MSANTD4Q8NCY6 345 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 PIP4K2CQ8TBX8 421 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 MIEF2Q96C03 454 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 C7orf25Q9BPX7 421 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 NUP58Q9BVL2 599 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 DPP7Q9UHL4 492 aa6.05□□□□□ -1.44
RTTN-218ENST00000640408 POTEFA5A3E0 1075 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 SLC37A4O43826 429 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 RPN1P04843 607 aaKnown RBP6.04□□□□□ -1.44
RTTN-218ENST00000640408 PEX3P56589 373 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 NLRP11P59045 1033 aaKnown RBP6.04□□□□□ -1.44
RTTN-218ENST00000640408 POTEGQ6S5H5 508 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 POTEEQ6S8J3 1075 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 ZPBP2Q6X784 338 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 HAUS6Q7Z4H7 955 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 POMGNT1Q8WZA1 660 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 KIAA1468Q9P260 1216 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 ZNF233A6NK53 670 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 MAFO75444 373 aaPredicted RBP6.04□□□□□ -1.44
RTTN-218ENST00000640408 AMHP03971 560 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 PDHA1P08559 390 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 PECAM1P16284 738 aaPredicted RBP6.04□□□□□ -1.44
RTTN-218ENST00000640408 CCND1P24385 295 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 NEK2P51955 445 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 CRYBB1P53674 252 aaPredicted RBP6.04□□□□□ -1.44
RTTN-218ENST00000640408 POU5F1Q01860 360 aaKnown RBP6.04□□□□□ -1.44
RTTN-218ENST00000640408 CUL4BQ13620 913 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 HYIQ5T013 277 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 TAPT1Q6NXT6 567 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 ZC3H18Q86VM9 953 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms