RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 C5orf67F2Z3F1 127 aa14.33□□□□□ -0.12
GTF3A-209ENST00000640289 NRP1O14786 923 aa14.33□□□□□ -0.12
GTF3A-209ENST00000640289 IGFBP6P24592 240 aaPredicted RBP14.33□□□□□ -0.12
GTF3A-209ENST00000640289 PPP1R2P41236 205 aa14.33□□□□□ -0.12
GTF3A-209ENST00000640289 ALDH7A1P49419 539 aaKnown RBP14.33□□□□□ -0.12
GTF3A-209ENST00000640289 GUCY2FP51841 1108 aa14.33□□□□□ -0.12
GTF3A-209ENST00000640289 POU5F1Q01860 360 aaKnown RBP14.33□□□□□ -0.12
GTF3A-209ENST00000640289 CYP24A1Q07973 514 aa14.33□□□□□ -0.12
GTF3A-209ENST00000640289 PAK1Q13153 545 aa14.33□□□□□ -0.12
GTF3A-209ENST00000640289 GRIN2CQ14957 1233 aa14.33□□□□□ -0.12
GTF3A-209ENST00000640289 CEP135Q66GS9 1140 aa14.33□□□□□ -0.12
GTF3A-209ENST00000640289 LMBRD2Q68DH5 695 aaPredicted RBP14.33□□□□□ -0.12
GTF3A-209ENST00000640289 CD302Q8IX05 232 aa14.33□□□□□ -0.12
GTF3A-209ENST00000640289 EFCAB13Q8IY85 973 aa14.33□□□□□ -0.12
GTF3A-209ENST00000640289 SLC39A11Q8N1S5 342 aa14.33□□□□□ -0.12
GTF3A-209ENST00000640289 KLHL23Q8NBE8 558 aa14.33□□□□□ -0.12
GTF3A-209ENST00000640289 PLEKHO2Q8TD55 490 aa14.33□□□□□ -0.12
GTF3A-209ENST00000640289 GDPD5Q8WTR4 605 aa14.33□□□□□ -0.12
GTF3A-209ENST00000640289 TMEM174Q8WUU8 243 aa14.33□□□□□ -0.12
GTF3A-209ENST00000640289 BCL7CQ8WUZ0 217 aaPredicted RBP14.33□□□□□ -0.12
GTF3A-209ENST00000640289 SYAP1Q96A49 352 aaPredicted RBP14.33□□□□□ -0.12
GTF3A-209ENST00000640289 SAMD11Q96NU1 681 aa14.33□□□□□ -0.12
GTF3A-209ENST00000640289 MED15Q96RN5 788 aa14.33□□□□□ -0.12
GTF3A-209ENST00000640289 DUSP9Q99956 384 aaKnown RBP14.33□□□□□ -0.12
GTF3A-209ENST00000640289 ASB7Q9H672 318 aa14.33□□□□□ -0.12
GTF3A-209ENST00000640289 KIAA1586Q9HCI6 787 aa14.33□□□□□ -0.12
GTF3A-209ENST00000640289 AAASQ9NRG9 546 aa14.33□□□□□ -0.12
GTF3A-209ENST00000640289 RWDD3Q9Y3V2 267 aa14.33□□□□□ -0.12
GTF3A-209ENST00000640289 PCDHB12Q9Y5F1 795 aa14.33□□□□□ -0.12
GTF3A-209ENST00000640289 AKAP3O75969 853 aa14.32□□□□□ -0.12
GTF3A-209ENST00000640289 IL18RAPO95256 599 aa14.32□□□□□ -0.12
GTF3A-209ENST00000640289 ALDH2P05091 517 aa14.32□□□□□ -0.12
GTF3A-209ENST00000640289 ITGB1P05556 798 aa14.32□□□□□ -0.12
GTF3A-209ENST00000640289 CLCNKBP51801 687 aa14.32□□□□□ -0.12
GTF3A-209ENST00000640289 LRRC63Q05C16 580 aa14.32□□□□□ -0.12
GTF3A-209ENST00000640289 MYBPC2Q14324 1141 aa14.32□□□□□ -0.12
GTF3A-209ENST00000640289 TMEM132DQ14C87 1099 aa14.32□□□□□ -0.12
GTF3A-209ENST00000640289 ZBTB6Q15916 424 aa14.32□□□□□ -0.12
GTF3A-209ENST00000640289 TTI2Q6NXR4 508 aa14.32□□□□□ -0.12
GTF3A-209ENST00000640289 MLKLQ8NB16 471 aa14.32□□□□□ -0.12
GTF3A-209ENST00000640289 MFSD14AQ96MC6 490 aa14.32□□□□□ -0.12
GTF3A-209ENST00000640289 TMEM175Q9BSA9 504 aa14.32□□□□□ -0.12
GTF3A-209ENST00000640289 PLVAPQ9BX97 442 aa14.32□□□□□ -0.12
GTF3A-209ENST00000640289 GZF1Q9H116 711 aaPredicted RBP14.32□□□□□ -0.12
GTF3A-209ENST00000640289 PRDM12Q9H4Q4 367 aa14.32□□□□□ -0.12
GTF3A-209ENST00000640289 ALG13Q9NP73 1137 aaKnown RBP14.32□□□□□ -0.12
GTF3A-209ENST00000640289 SLC38A7Q9NVC3 462 aa14.32□□□□□ -0.12
GTF3A-209ENST00000640289 MARCH5Q9NX47 278 aa14.32□□□□□ -0.12
GTF3A-209ENST00000640289 UBQLN1Q9UMX0 589 aaKnown RBP14.32□□□□□ -0.12
GTF3A-209ENST00000640289 FAN1Q9Y2M0 1017 aa14.32□□□□□ -0.12
GTF3A-209ENST00000640289 H3BNC9 293 aa14.31□□□□□ -0.12
GTF3A-209ENST00000640289 FGF18O76093 207 aa14.31□□□□□ -0.12
GTF3A-209ENST00000640289 CSPG5O95196 566 aa14.31□□□□□ -0.12
GTF3A-209ENST00000640289 RB1P06400 928 aa14.31□□□□□ -0.12
GTF3A-209ENST00000640289 DLATP10515 647 aaKnown RBP14.31□□□□□ -0.12
GTF3A-209ENST00000640289 RPL13P26373 211 aaKnown RBP14.31□□□□□ -0.12
GTF3A-209ENST00000640289 TFAMQ00059 246 aaKnown RBP14.31□□□□□ -0.12
GTF3A-209ENST00000640289 FKBP3Q00688 224 aaKnown RBP14.31□□□□□ -0.12
GTF3A-209ENST00000640289 GPM6BQ13491 265 aa14.31□□□□□ -0.12
GTF3A-209ENST00000640289 PSMD6Q15008 389 aa14.31□□□□□ -0.12
GTF3A-209ENST00000640289 SKOR2Q2VWA4 1001 aaPredicted RBP14.31□□□□□ -0.12
GTF3A-209ENST00000640289 SCARA3Q6AZY7 606 aa14.31□□□□□ -0.12
GTF3A-209ENST00000640289 GPR153Q6NV75 609 aa14.31□□□□□ -0.12
GTF3A-209ENST00000640289 SASS6Q6UVJ0 657 aa14.31□□□□□ -0.12
GTF3A-209ENST00000640289 ZC3H3Q8IXZ2 948 aaKnown RBP14.31□□□□□ -0.12
GTF3A-209ENST00000640289 HASPINQ8TF76 798 aa14.31□□□□□ -0.12
GTF3A-209ENST00000640289 CCDC127Q96BQ5 260 aa14.31□□□□□ -0.12
GTF3A-209ENST00000640289 IGSF21Q96ID5 467 aa14.31□□□□□ -0.12
GTF3A-209ENST00000640289 POP1Q99575 1024 aaKnown RBP14.31□□□□□ -0.12
GTF3A-209ENST00000640289 SPG21Q9NZD8 308 aa14.31□□□□□ -0.12
GTF3A-209ENST00000640289 FRMD4BQ9Y2L6 1034 aa14.31□□□□□ -0.12
GTF3A-209ENST00000640289 DERAQ9Y315 318 aa14.31□□□□□ -0.12
GTF3A-209ENST00000640289 C2CD2Q9Y426 696 aa14.31□□□□□ -0.12
GTF3A-209ENST00000640289 PTPRJQ12913 1337 aa14.31□□□□□ -0.12
GTF3A-209ENST00000640289 KIAA1671Q9BY89 1806 aa14.3□□□□□ -0.12
GTF3A-209ENST00000640289 BICDL2A1A5D9 508 aa14.3□□□□□ -0.12
GTF3A-209ENST00000640289 PODXLO00592 558 aa14.3□□□□□ -0.12
GTF3A-209ENST00000640289 PPEF2O14830 753 aa14.3□□□□□ -0.12
GTF3A-209ENST00000640289 CETN3O15182 167 aa14.3□□□□□ -0.12
GTF3A-209ENST00000640289 GRM6O15303 877 aa14.3□□□□□ -0.12
GTF3A-209ENST00000640289 LPXNO60711 386 aa14.3□□□□□ -0.12
GTF3A-209ENST00000640289 KIF4AO95239 1232 aa14.3□□□□□ -0.12
GTF3A-209ENST00000640289 CYP3A5P20815 502 aa14.3□□□□□ -0.12
GTF3A-209ENST00000640289 DLG4P78352 724 aa14.3□□□□□ -0.12
GTF3A-209ENST00000640289 HSP90AA2PQ14568 343 aaPredicted RBP14.3□□□□□ -0.12
GTF3A-209ENST00000640289 UPP1Q16831 310 aa14.3□□□□□ -0.12
GTF3A-209ENST00000640289 SPATA1Q5VX52 437 aa14.3□□□□□ -0.12
GTF3A-209ENST00000640289 C11orf57Q6ZUT1 292 aaPredicted RBP14.3□□□□□ -0.12
GTF3A-209ENST00000640289 FAM186BQ8IYM0 893 aa14.3□□□□□ -0.12
GTF3A-209ENST00000640289 DEFB123Q8N688 67 aa14.3□□□□□ -0.12
GTF3A-209ENST00000640289 C3orf58Q8NDZ4 430 aa14.3□□□□□ -0.12
GTF3A-209ENST00000640289 BEST2Q8NFU1 509 aa14.3□□□□□ -0.12
GTF3A-209ENST00000640289 OR5B17Q8NGF7 314 aa14.3□□□□□ -0.12
GTF3A-209ENST00000640289 SPPL3Q8TCT6 385 aa14.3□□□□□ -0.12
GTF3A-209ENST00000640289 FNBP1Q96RU3 617 aa14.3□□□□□ -0.12
GTF3A-209ENST00000640289 CGRRF1Q99675 332 aa14.3□□□□□ -0.12
GTF3A-209ENST00000640289 C11orf84Q9BUA3 381 aaPredicted RBP14.3□□□□□ -0.12
GTF3A-209ENST00000640289 RWDD2AQ9UIY3 292 aa14.3□□□□□ -0.12
GTF3A-209ENST00000640289 SYCE3A1L190 88 aa14.29□□□□□ -0.12
GTF3A-209ENST00000640289 LRRIQ3A6PVS8 624 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms