RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 GLIS3Q8NEA6 775 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 KLHDC9Q8NEP7 349 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 MYRIPQ8NFW9 859 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 TRAPPC12Q8WVT3 735 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 NAT10Q9H0A0 1025 aaKnown RBP8.73□□□□□ -1.01
SCARB2-220ENST00000640076 SLC39A2Q9NP94 309 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 OLFML3Q9NRN5 406 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 TBC1D7Q9P0N9 293 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 SEL1LQ9UBV2 794 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 DACH1Q9UI36 760 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 PPM1HQ9ULR3 514 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 MAPRE3Q9UPY8 281 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 COL1A2P08123 1366 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 FRMPD3Q5JV73 1810 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 IGKV6-21A0A0C4DH24 114 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 CCDC163A0A0D9SF12 145 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 FSD2A1L4K1 749 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 RFPL3O75679 317 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 PLS3P13797 630 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 PRCPP42785 496 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 PPFIA1Q13136 1202 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 MLC1Q15049 377 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 COBLL1Q53SF7 1204 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 FAM102BQ5T8I3 360 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 PDE12Q6L8Q7 609 aaKnown RBP8.72□□□□□ -1.01
SCARB2-220ENST00000640076 ZNF438Q7Z4V0 828 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 ADSSL1Q8N142 457 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 MYCT1Q8N699 235 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 OTUD6BQ8N6M0 293 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 CEP120Q8N960 986 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 RNF214Q8ND24 703 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 KIFAP3Q92845 792 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 FIZ1Q96SL8 496 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 BPIFA3Q9BQP9 254 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 MTG1Q9BT17 334 aaPredicted RBP8.72□□□□□ -1.01
SCARB2-220ENST00000640076 FGFBP2Q9BYJ0 223 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.72□□□□□ -1.01
SCARB2-220ENST00000640076 CBX8Q9HC52 389 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 LARSQ9P2J5 1176 aaKnown RBP8.72□□□□□ -1.01
SCARB2-220ENST00000640076 KLF15Q9UIH9 416 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 E2F8A0AVK6 867 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 ARHGAP33O14559 1287 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 GAS2O43903 313 aaKnown RBP8.72□□□□□ -1.01
SCARB2-220ENST00000640076 ZEB2O60315 1214 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 MICAL2O94851 1124 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 C22orf31O95567 290 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 SMIM10L2AP0DMW4 78 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 SMIM10L2BP0DMW5 78 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 LIG3P49916 1009 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 CASP5P51878 434 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 RTP1P59025 263 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 IQCB1Q15051 598 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 GRIK4Q16099 956 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 KCNA10Q16322 511 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 DMRTA1Q5VZB9 504 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 KLHL10Q6JEL2 608 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 CXCL17Q6UXB2 119 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 EPM2AIP1Q7L775 607 aaPredicted RBP8.72□□□□□ -1.01
SCARB2-220ENST00000640076 FAM178BQ8IXR5 827 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 GUF1Q8N442 669 aaKnown RBP8.72□□□□□ -1.01
SCARB2-220ENST00000640076 BSNDQ8WZ55 320 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 TMEM143Q96AN5 459 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 DCBLD2Q96PD2 775 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 FERD3LQ96RJ6 166 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 JPH2Q9BR39 696 aaPredicted RBP8.72□□□□□ -1.01
SCARB2-220ENST00000640076 KATNAL1Q9BW62 490 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 POLR3FQ9H1D9 316 aaPredicted RBP8.72□□□□□ -1.01
SCARB2-220ENST00000640076 MRPL44Q9H9J2 332 aaKnown RBP8.72□□□□□ -1.01
SCARB2-220ENST00000640076 C17orf75Q9HAS0 396 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 TMPRSS4Q9NRS4 437 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 MAP4K5Q9Y4K4 846 aa8.72□□□□□ -1.01
SCARB2-220ENST00000640076 TRIP12Q14669 1992 aaPredicted RBP8.71□□□□□ -1.01
SCARB2-220ENST00000640076 NRCAMQ92823 1304 aa8.71□□□□□ -1.02
SCARB2-220ENST00000640076 RRN3P2A6NIE6 340 aa8.71□□□□□ -1.02
SCARB2-220ENST00000640076 BHMG1C9JSJ3 638 aaPredicted RBP8.71□□□□□ -1.02
SCARB2-220ENST00000640076 PSMA7O14818 248 aa8.71□□□□□ -1.02
SCARB2-220ENST00000640076 MAGEB2O15479 319 aa8.71□□□□□ -1.02
SCARB2-220ENST00000640076 ASGR1P07306 291 aa8.71□□□□□ -1.02
SCARB2-220ENST00000640076 KLRC1P26715 233 aa8.71□□□□□ -1.02
SCARB2-220ENST00000640076 NMT1P30419 496 aaKnown RBP8.71□□□□□ -1.02
SCARB2-220ENST00000640076 ARL2P36404 184 aa8.71□□□□□ -1.02
SCARB2-220ENST00000640076 PPP1R2P41236 205 aa8.71□□□□□ -1.02
SCARB2-220ENST00000640076 PEX3P56589 373 aa8.71□□□□□ -1.02
SCARB2-220ENST00000640076 DRP2Q13474 957 aa8.71□□□□□ -1.02
SCARB2-220ENST00000640076 STIM1Q13586 685 aa8.71□□□□□ -1.02
SCARB2-220ENST00000640076 MARCH8Q5T0T0 291 aa8.71□□□□□ -1.02
SCARB2-220ENST00000640076 FBXO46Q6PJ61 603 aaPredicted RBP8.71□□□□□ -1.02
SCARB2-220ENST00000640076 LUZP1Q86V48 1076 aa8.71□□□□□ -1.02
SCARB2-220ENST00000640076 MYOCDQ8IZQ8 938 aa8.71□□□□□ -1.02
SCARB2-220ENST00000640076 ZNF295-AS1Q8N0V1 137 aa8.71□□□□□ -1.02
SCARB2-220ENST00000640076 LRRC71Q8N4P6 559 aa8.71□□□□□ -1.02
SCARB2-220ENST00000640076 PCSK9Q8NBP7 692 aaKnown RBP8.71□□□□□ -1.02
SCARB2-220ENST00000640076 RIN3Q8TB24 985 aa8.71□□□□□ -1.02
SCARB2-220ENST00000640076 SCFD1Q8WVM8 642 aa8.71□□□□□ -1.02
SCARB2-220ENST00000640076 LMBR1Q8WVP7 490 aa8.71□□□□□ -1.02
SCARB2-220ENST00000640076 ZBTB10Q96DT7 871 aa8.71□□□□□ -1.02
SCARB2-220ENST00000640076 MED15Q96RN5 788 aa8.71□□□□□ -1.02
SCARB2-220ENST00000640076 PAK6Q9NQU5 681 aaPredicted RBP8.71□□□□□ -1.02
SCARB2-220ENST00000640076 RAB6BQ9NRW1 208 aa8.71□□□□□ -1.02
SCARB2-220ENST00000640076 SETD4Q9NVD3 440 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms