RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 ICAM1P05362 532 aa15.27■□□□□ 0.03
SCARB2-216ENST00000639300 PDGFRAP16234 1089 aa15.27■□□□□ 0.03
SCARB2-216ENST00000639300 CDK17Q00537 523 aa15.27■□□□□ 0.03
SCARB2-216ENST00000639300 RASIP1Q5U651 963 aa15.27■□□□□ 0.03
SCARB2-216ENST00000639300 FBXW10Q5XX13 1052 aa15.27■□□□□ 0.03
SCARB2-216ENST00000639300 STYK1Q6J9G0 422 aa15.27■□□□□ 0.03
SCARB2-216ENST00000639300 C4orf33Q8N1A6 199 aa15.27■□□□□ 0.03
SCARB2-216ENST00000639300 ATP11CQ8NB49 1132 aa15.27■□□□□ 0.03
SCARB2-216ENST00000639300 ELMO3Q96BJ8 720 aa15.27■□□□□ 0.03
SCARB2-216ENST00000639300 MYL3P08590 195 aa15.26■□□□□ 0.03
SCARB2-216ENST00000639300 SRGAP2BP0DMP2 458 aa15.26■□□□□ 0.03
SCARB2-216ENST00000639300 NR1H3Q13133 447 aa15.26■□□□□ 0.03
SCARB2-216ENST00000639300 THOC5Q13769 683 aaKnown RBP15.26■□□□□ 0.03
SCARB2-216ENST00000639300 DBN1Q16643 649 aa15.26■□□□□ 0.03
SCARB2-216ENST00000639300 NBPF9Q3BBW0 867 aa15.26■□□□□ 0.03
SCARB2-216ENST00000639300 BEST2Q8NFU1 509 aa15.26■□□□□ 0.03
SCARB2-216ENST00000639300 RUBCNQ92622 972 aa15.26■□□□□ 0.03
SCARB2-216ENST00000639300 ACSF2Q96CM8 615 aaPredicted RBP15.26■□□□□ 0.03
SCARB2-216ENST00000639300 GMCL1Q96IK5 515 aa15.26■□□□□ 0.03
SCARB2-216ENST00000639300 CYTH2Q99418 400 aa15.26■□□□□ 0.03
SCARB2-216ENST00000639300 TRAIPQ9BWF2 469 aa15.26■□□□□ 0.03
SCARB2-216ENST00000639300 TMX2Q9Y320 296 aa15.26■□□□□ 0.03
SCARB2-216ENST00000639300 SMTNL2Q2TAL5 461 aa15.26■□□□□ 0.03
SCARB2-216ENST00000639300 BZW1Q7L1Q6 419 aaKnown RBP15.26■□□□□ 0.03
SCARB2-216ENST00000639300 CRLF3Q8IUI8 442 aa15.26■□□□□ 0.03
SCARB2-216ENST00000639300 RYBPQ8N488 228 aaPredicted RBP15.26■□□□□ 0.03
SCARB2-216ENST00000639300 GSDMBQ8TAX9 411 aa15.26■□□□□ 0.03
SCARB2-216ENST00000639300 ATG4AQ8WYN0 398 aa15.26■□□□□ 0.03
SCARB2-216ENST00000639300 ANKEF1Q9NU02 776 aa15.26■□□□□ 0.03
SCARB2-216ENST00000639300 HAUS2Q9NVX0 235 aa15.26■□□□□ 0.03
SCARB2-216ENST00000639300 GYG2O15488 501 aa15.26■□□□□ 0.03
SCARB2-216ENST00000639300 IL17AQ16552 155 aa15.26■□□□□ 0.03
SCARB2-216ENST00000639300 APOBEC3HQ6NTF7 200 aaKnown RBP15.26■□□□□ 0.03
SCARB2-216ENST00000639300 MYLK4Q86YV6 388 aaPredicted RBP15.26■□□□□ 0.03
SCARB2-216ENST00000639300 SENP7Q9BQF6 1050 aa15.26■□□□□ 0.03
SCARB2-216ENST00000639300 CCDC195A0A1B0GUA6 201 aa15.26■□□□□ 0.03
SCARB2-216ENST00000639300 CDH16O75309 829 aa15.26■□□□□ 0.03
SCARB2-216ENST00000639300 DCTN3O75935 186 aa15.26■□□□□ 0.03
SCARB2-216ENST00000639300 SASH3O75995 380 aa15.26■□□□□ 0.03
SCARB2-216ENST00000639300 ERFP50548 548 aa15.26■□□□□ 0.03
SCARB2-216ENST00000639300 SOX10P56693 466 aa15.26■□□□□ 0.03
SCARB2-216ENST00000639300 ACTR2P61160 394 aa15.26■□□□□ 0.03
SCARB2-216ENST00000639300 KLHL38Q2WGJ6 581 aa15.26■□□□□ 0.03
SCARB2-216ENST00000639300 DNAJC5Q9H3Z4 198 aa15.26■□□□□ 0.03
SCARB2-216ENST00000639300 SPDYE2BA6NHP3 402 aa15.25■□□□□ 0.03
SCARB2-216ENST00000639300 SPDYE6P0CI01 402 aa15.25■□□□□ 0.03
SCARB2-216ENST00000639300 RALAP11233 206 aa15.25■□□□□ 0.03
SCARB2-216ENST00000639300 ITIH2P19823 946 aa15.25■□□□□ 0.03
SCARB2-216ENST00000639300 ROR1Q01973 937 aa15.25■□□□□ 0.03
SCARB2-216ENST00000639300 KCNA1Q09470 495 aa15.25■□□□□ 0.03
SCARB2-216ENST00000639300 NME3Q13232 169 aa15.25■□□□□ 0.03
SCARB2-216ENST00000639300 ARL13BQ3SXY8 428 aa15.25■□□□□ 0.03
SCARB2-216ENST00000639300 ATG16L1Q676U5 607 aa15.25■□□□□ 0.03
SCARB2-216ENST00000639300 HEATR6Q6AI08 1181 aaKnown RBP15.25■□□□□ 0.03
SCARB2-216ENST00000639300 WDR75Q8IWA0 830 aaKnown RBP15.25■□□□□ 0.03
SCARB2-216ENST00000639300 TAS1R2Q8TE23 839 aa15.25■□□□□ 0.03
SCARB2-216ENST00000639300 SLC20A1Q8WUM9 679 aa15.25■□□□□ 0.03
SCARB2-216ENST00000639300 IGSF9BQ9UPX0 1349 aa15.25■□□□□ 0.03
SCARB2-216ENST00000639300 TMEM150BA6NC51 233 aa15.25■□□□□ 0.03
SCARB2-216ENST00000639300 C19orf81C9J6K1 198 aa15.25■□□□□ 0.03
SCARB2-216ENST00000639300 APRTP07741 180 aa15.25■□□□□ 0.03
SCARB2-216ENST00000639300 PRLRP16471 622 aa15.25■□□□□ 0.03
SCARB2-216ENST00000639300 GTF2H1P32780 548 aa15.25■□□□□ 0.03
SCARB2-216ENST00000639300 NPTX2P47972 431 aa15.25■□□□□ 0.03
SCARB2-216ENST00000639300 RHBDL3P58872 404 aa15.25■□□□□ 0.03
SCARB2-216ENST00000639300 TMEM62Q0P6H9 643 aa15.25■□□□□ 0.03
SCARB2-216ENST00000639300 SLC13A5Q86YT5 568 aaPredicted RBP15.25■□□□□ 0.03
SCARB2-216ENST00000639300 FAM163AQ96GL9 167 aaPredicted RBP15.25■□□□□ 0.03
SCARB2-216ENST00000639300 KLF6Q99612 283 aaPredicted RBP15.25■□□□□ 0.03
SCARB2-216ENST00000639300 LBHD1Q9BQE6 289 aaPredicted RBP15.25■□□□□ 0.03
SCARB2-216ENST00000639300 TLR10Q9BXR5 811 aa15.25■□□□□ 0.03
SCARB2-216ENST00000639300 EHD4Q9H223 541 aa15.25■□□□□ 0.03
SCARB2-216ENST00000639300 TRABDQ9H4I3 376 aa15.25■□□□□ 0.03
SCARB2-216ENST00000639300 GTF3C4Q9UKN8 822 aa15.25■□□□□ 0.03
SCARB2-216ENST00000639300 EML1O00423 815 aa15.25■□□□□ 0.03
SCARB2-216ENST00000639300 CSPG5O95196 566 aa15.25■□□□□ 0.03
SCARB2-216ENST00000639300 AGTP01019 485 aa15.25■□□□□ 0.03
SCARB2-216ENST00000639300 ITGA4P13612 1032 aa15.25■□□□□ 0.03
SCARB2-216ENST00000639300 ICE2Q659A1 982 aa15.25■□□□□ 0.03
SCARB2-216ENST00000639300 GPAT2Q6NUI2 795 aa15.25■□□□□ 0.03
SCARB2-216ENST00000639300 SCN4BQ8IWT1 228 aa15.25■□□□□ 0.03
SCARB2-216ENST00000639300 FBXO25Q8TCJ0 367 aa15.25■□□□□ 0.03
SCARB2-216ENST00000639300 XPO6Q96QU8 1125 aaKnown RBP15.25■□□□□ 0.03
SCARB2-216ENST00000639300 MYCBPQ99417 103 aaPredicted RBP15.25■□□□□ 0.03
SCARB2-216ENST00000639300 DDX23Q9BUQ8 820 aaKnown RBP15.25■□□□□ 0.03
SCARB2-216ENST00000639300 CYP26B1Q9NR63 512 aa15.25■□□□□ 0.03
SCARB2-216ENST00000639300 NEU2Q9Y3R4 380 aa15.25■□□□□ 0.03
SCARB2-216ENST00000639300 HSPA9P38646 679 aaKnown RBP15.24■□□□□ 0.03
SCARB2-216ENST00000639300 DDR1Q08345 913 aa15.24■□□□□ 0.03
SCARB2-216ENST00000639300 STAT4Q14765 748 aa15.24■□□□□ 0.03
SCARB2-216ENST00000639300 DDX56Q9NY93 547 aaKnown RBP15.24■□□□□ 0.03
SCARB2-216ENST00000639300 CFAP69A5D8W1 941 aa15.24■□□□□ 0.03
SCARB2-216ENST00000639300 FOXP2O15409 715 aa15.24■□□□□ 0.03
SCARB2-216ENST00000639300 SGSM1Q2NKQ1 1148 aa15.24■□□□□ 0.03
SCARB2-216ENST00000639300 KCNV2Q8TDN2 545 aa15.24■□□□□ 0.03
SCARB2-216ENST00000639300 DHX38Q92620 1227 aaKnown RBP15.24■□□□□ 0.03
SCARB2-216ENST00000639300 SIK2Q9H0K1 926 aa15.24■□□□□ 0.03
SCARB2-216ENST00000639300 F8VZ95 297 aa15.24■□□□□ 0.03
SCARB2-216ENST00000639300 P4HA2O15460 535 aa15.24■□□□□ 0.03
SCARB2-216ENST00000639300 AP3M2P53677 418 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms