RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 PNMA8BQ9ULN7 279 aaPredicted RBP4.05□□□□□ -1.76
CCDC7-213ENST00000639290 PDZD2O15018 2839 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 ANKHD1Q8IWZ3 2542 aaKnown RBP4.05□□□□□ -1.76
CCDC7-213ENST00000639290 COL1A2P08123 1366 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 NRG2O14511 850 aaPredicted RBP4.05□□□□□ -1.76
CCDC7-213ENST00000639290 GAS2O43903 313 aaKnown RBP4.05□□□□□ -1.76
CCDC7-213ENST00000639290 DFNA5O60443 496 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 VPS4BO75351 444 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 RFPL2O75678 378 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 EIF3JO75822 258 aaKnown RBP4.05□□□□□ -1.76
CCDC7-213ENST00000639290 GJB6O95452 261 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 SKIP12755 728 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 ALAS1P13196 640 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 IL15P40933 162 aaPredicted RBP4.05□□□□□ -1.76
CCDC7-213ENST00000639290 TMPOP42166 694 aaKnown RBP4.05□□□□□ -1.76
CCDC7-213ENST00000639290 GLUD2P49448 558 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 DUSP3P51452 185 aaPredicted RBP4.05□□□□□ -1.76
CCDC7-213ENST00000639290 STAT2P52630 851 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 DSG1Q02413 1049 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 TANGO2Q6ICL3 276 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 NSMFQ6X4W1 530 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 VSIG10LQ86VR7 867 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 HEATR4Q86WZ0 1026 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 TSTD1Q8NFU3 115 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 SETD7Q8WTS6 366 aaKnown RBP4.05□□□□□ -1.76
CCDC7-213ENST00000639290 ZNF516Q92618 1163 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 GMCL1Q96IK5 515 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 ADAM2Q99965 735 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 TMEM134Q9H6X4 195 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 HOMER2Q9NSB8 354 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 RBM12Q9NTZ6 932 aaKnown RBP4.05□□□□□ -1.76
CCDC7-213ENST00000639290 HMG20BQ9P0W2 317 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 VPS4AQ9UN37 437 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 WDFY3Q8IZQ1 3526 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 LRBAP50851 2863 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 MED13Q9UHV7 2174 aa4.05□□□□□ -1.76
CCDC7-213ENST00000639290 FAM149AA5PLN7 773 aa4.04□□□□□ -1.76
CCDC7-213ENST00000639290 WDR64B1ANS9 1081 aa4.04□□□□□ -1.76
CCDC7-213ENST00000639290 TEX28O15482 410 aa4.04□□□□□ -1.76
CCDC7-213ENST00000639290 GRID2O43424 1007 aa4.04□□□□□ -1.76
CCDC7-213ENST00000639290 AKR1B1P15121 316 aa4.04□□□□□ -1.76
CCDC7-213ENST00000639290 BCKDHBP21953 392 aa4.04□□□□□ -1.76
CCDC7-213ENST00000639290 COPS2P61201 443 aa4.04□□□□□ -1.76
CCDC7-213ENST00000639290 GNAI1P63096 354 aa4.04□□□□□ -1.76
CCDC7-213ENST00000639290 TARDBPQ13148 414 aaKnown RBP eCLIP4.04□□□□□ -1.76
CCDC7-213ENST00000639290 DMC1Q14565 340 aa4.04□□□□□ -1.76
CCDC7-213ENST00000639290 LIN9Q5TKA1 542 aa4.04□□□□□ -1.76
CCDC7-213ENST00000639290 GRASPQ7Z6J2 395 aaPredicted RBP4.04□□□□□ -1.76
CCDC7-213ENST00000639290 MCEMP1Q8IX19 187 aa4.04□□□□□ -1.76
CCDC7-213ENST00000639290 RHBDD1Q8TEB9 315 aa4.04□□□□□ -1.76
CCDC7-213ENST00000639290 UBXN4Q92575 508 aa4.04□□□□□ -1.76
CCDC7-213ENST00000639290 SMARCD2Q92925 531 aa4.04□□□□□ -1.76
CCDC7-213ENST00000639290 ASB16Q96NS5 453 aa4.04□□□□□ -1.76
CCDC7-213ENST00000639290 CCNL2Q96S94 520 aaPredicted RBP4.04□□□□□ -1.76
CCDC7-213ENST00000639290 TMEM209Q96SK2 561 aa4.04□□□□□ -1.76
CCDC7-213ENST00000639290 TMEM74BQ9NUR3 256 aa4.04□□□□□ -1.76
CCDC7-213ENST00000639290 PARP2Q9UGN5 583 aa4.04□□□□□ -1.76
CCDC7-213ENST00000639290 TPCN1Q9ULQ1 816 aa4.04□□□□□ -1.76
CCDC7-213ENST00000639290 ADGRG1Q9Y653 693 aa4.04□□□□□ -1.76
CCDC7-213ENST00000639290 SPTBN1Q01082 2364 aaKnown RBP4.04□□□□□ -1.76
CCDC7-213ENST00000639290 DCLK1O15075 740 aa4.04□□□□□ -1.76
CCDC7-213ENST00000639290 REC8O95072 547 aa4.04□□□□□ -1.76
CCDC7-213ENST00000639290 PRKCGP05129 697 aa4.04□□□□□ -1.76
CCDC7-213ENST00000639290 GALTP07902 379 aa4.04□□□□□ -1.76
CCDC7-213ENST00000639290 MATKP42679 507 aa4.04□□□□□ -1.76
CCDC7-213ENST00000639290 METAP2P50579 478 aaKnown RBP eCLIP4.04□□□□□ -1.76
CCDC7-213ENST00000639290 DGKEP52429 567 aa4.04□□□□□ -1.76
CCDC7-213ENST00000639290 LY6KQ17RY6 165 aa4.04□□□□□ -1.76
CCDC7-213ENST00000639290 CCDC96Q2M329 555 aa4.04□□□□□ -1.76
CCDC7-213ENST00000639290 PABPC1LQ4VXU2 614 aaKnown RBP4.04□□□□□ -1.76
CCDC7-213ENST00000639290 MUM1L1Q5H9M0 696 aa4.04□□□□□ -1.76
CCDC7-213ENST00000639290 PPM1LQ5SGD2 360 aa4.04□□□□□ -1.76
CCDC7-213ENST00000639290 VITQ6UXI7 678 aa4.04□□□□□ -1.76
CCDC7-213ENST00000639290 RNF207Q6ZRF8 634 aa4.04□□□□□ -1.76
CCDC7-213ENST00000639290 YAF2Q8IY57 180 aa4.04□□□□□ -1.76
CCDC7-213ENST00000639290 CHDHQ8NE62 594 aaPredicted RBP4.04□□□□□ -1.76
CCDC7-213ENST00000639290 AUTS2Q8WXX7 1259 aa4.04□□□□□ -1.76
CCDC7-213ENST00000639290 SPATA33Q96N06 139 aa4.04□□□□□ -1.76
CCDC7-213ENST00000639290 MTMR9Q96QG7 549 aa4.04□□□□□ -1.76
CCDC7-213ENST00000639290 C9orf78Q9NZ63 289 aaPredicted RBP4.04□□□□□ -1.76
CCDC7-213ENST00000639290 FTSJ1Q9UET6 329 aa4.04□□□□□ -1.76
CCDC7-213ENST00000639290 MRPS23Q9Y3D9 190 aaKnown RBP4.04□□□□□ -1.76
CCDC7-213ENST00000639290 ANK1P16157 1881 aa4.04□□□□□ -1.76
CCDC7-213ENST00000639290 COL12A1Q99715 3063 aa4.04□□□□□ -1.76
CCDC7-213ENST00000639290 OATP04181 439 aa4.03□□□□□ -1.76
CCDC7-213ENST00000639290 FGFR1P11362 822 aa4.03□□□□□ -1.76
CCDC7-213ENST00000639290 YBX1P67809 324 aaKnown RBP4.03□□□□□ -1.76
CCDC7-213ENST00000639290 E2F1Q01094 437 aa4.03□□□□□ -1.76
CCDC7-213ENST00000639290 SPIRE1Q08AE8 756 aa4.03□□□□□ -1.76
CCDC7-213ENST00000639290 TMEM62Q0P6H9 643 aa4.03□□□□□ -1.76
CCDC7-213ENST00000639290 SKIDA1Q1XH10 827 aa4.03□□□□□ -1.76
CCDC7-213ENST00000639290 DHRS13Q6UX07 377 aa4.03□□□□□ -1.76
CCDC7-213ENST00000639290 USP53Q70EK8 1073 aa4.03□□□□□ -1.76
CCDC7-213ENST00000639290 SV2AQ7L0J3 742 aa4.03□□□□□ -1.76
CCDC7-213ENST00000639290 SAMD3Q8N6K7 520 aa4.03□□□□□ -1.76
CCDC7-213ENST00000639290 ITFG1Q8TB96 612 aa4.03□□□□□ -1.76
CCDC7-213ENST00000639290 NSUN6Q8TEA1 469 aaKnown RBP4.03□□□□□ -1.76
CCDC7-213ENST00000639290 HHIPQ96QV1 700 aa4.03□□□□□ -1.76
CCDC7-213ENST00000639290 TM7SF3Q9NS93 570 aa4.03□□□□□ -1.76
CCDC7-213ENST00000639290 SETD4Q9NVD3 440 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms