RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 SOX4Q06945 474 aaPredicted RBP21.06■□□□□ 0.96
HLA-A-209ENST00000638375 ZBTB6Q15916 424 aa21.06■□□□□ 0.96
HLA-A-209ENST00000638375 COLGALT2Q8IYK4 626 aa21.06■□□□□ 0.96
HLA-A-209ENST00000638375 C18orf25Q96B23 403 aaPredicted RBP21.06■□□□□ 0.96
HLA-A-209ENST00000638375 BORCS6Q96GS4 357 aa21.06■□□□□ 0.96
HLA-A-209ENST00000638375 SRRTQ9BXP5 876 aaKnown RBP21.06■□□□□ 0.96
HLA-A-209ENST00000638375 DNAJB4Q9UDY4 337 aa21.06■□□□□ 0.96
HLA-A-209ENST00000638375 ANK1P16157 1881 aa21.06■□□□□ 0.96
HLA-A-209ENST00000638375 TRIP11Q15643 1979 aa21.06■□□□□ 0.96
HLA-A-209ENST00000638375 PTPRJQ12913 1337 aa21.05■□□□□ 0.96
HLA-A-209ENST00000638375 SOX1O00570 391 aaPredicted RBP21.05■□□□□ 0.96
HLA-A-209ENST00000638375 EPB41P11171 864 aaKnown RBP21.05■□□□□ 0.96
HLA-A-209ENST00000638375 TMEM132DQ14C87 1099 aa21.05■□□□□ 0.96
HLA-A-209ENST00000638375 LMBRD2Q68DH5 695 aaPredicted RBP21.05■□□□□ 0.96
HLA-A-209ENST00000638375 FILIP1Q7Z7B0 1213 aa21.05■□□□□ 0.96
HLA-A-209ENST00000638375 CLP1Q92989 425 aaKnown RBP21.05■□□□□ 0.96
HLA-A-209ENST00000638375 CCDC127Q96BQ5 260 aa21.05■□□□□ 0.96
HLA-A-209ENST00000638375 GOLGA2P5Q9HBQ8 144 aa21.05■□□□□ 0.96
HLA-A-209ENST00000638375 CACNG4Q9UBN1 327 aa21.05■□□□□ 0.96
HLA-A-209ENST00000638375 TUBGCP4Q9UGJ1 667 aa21.05■□□□□ 0.96
HLA-A-209ENST00000638375 DERAQ9Y315 318 aa21.05■□□□□ 0.96
HLA-A-209ENST00000638375 C2CD2Q9Y426 696 aa21.05■□□□□ 0.96
HLA-A-209ENST00000638375 TRIOBPQ9H2D6 2365 aa21.04■□□□□ 0.96
HLA-A-209ENST00000638375 CASTOR2A6NHX0 329 aa21.04■□□□□ 0.96
HLA-A-209ENST00000638375 TULP1O00294 542 aaPredicted RBP21.04■□□□□ 0.96
HLA-A-209ENST00000638375 ZC3H11AO75152 810 aaKnown RBP eCLIP21.04■□□□□ 0.96
HLA-A-209ENST00000638375 DLATP10515 647 aaKnown RBP21.04■□□□□ 0.96
HLA-A-209ENST00000638375 PBX3P40426 434 aa21.04■□□□□ 0.96
HLA-A-209ENST00000638375 GUCY2FP51841 1108 aa21.04■□□□□ 0.96
HLA-A-209ENST00000638375 TAP1Q03518 808 aa21.04■□□□□ 0.96
HLA-A-209ENST00000638375 TUSC3Q13454 348 aa21.04■□□□□ 0.96
HLA-A-209ENST00000638375 SURF1Q15526 300 aa21.04■□□□□ 0.96
HLA-A-209ENST00000638375 ENOX1Q8TC92 643 aaKnown RBP21.04■□□□□ 0.96
HLA-A-209ENST00000638375 PARD3BQ8TEW8 1205 aa21.04■□□□□ 0.96
HLA-A-209ENST00000638375 FAM193BQ96PV7 902 aaPredicted RBP21.04■□□□□ 0.96
HLA-A-209ENST00000638375 TSPAN18Q96SJ8 248 aa21.04■□□□□ 0.96
HLA-A-209ENST00000638375 POP1Q99575 1024 aaKnown RBP21.04■□□□□ 0.96
HLA-A-209ENST00000638375 CGRRF1Q99675 332 aa21.04■□□□□ 0.96
HLA-A-209ENST00000638375 PAAF1Q9BRP4 392 aa21.04■□□□□ 0.96
HLA-A-209ENST00000638375 SLC38A7Q9NVC3 462 aa21.04■□□□□ 0.96
HLA-A-209ENST00000638375 UBQLN1Q9UMX0 589 aaKnown RBP21.04■□□□□ 0.96
HLA-A-209ENST00000638375 PDCD11Q14690 1871 aaKnown RBP21.04■□□□□ 0.96
HLA-A-209ENST00000638375 TDRD15B5MCY1 1934 aaKnown RBP21.04■□□□□ 0.96
HLA-A-209ENST00000638375 LAMA3Q16787 3333 aa21.03■□□□□ 0.96
HLA-A-209ENST00000638375 LRRIQ3A6PVS8 624 aaPredicted RBP21.03■□□□□ 0.96
HLA-A-209ENST00000638375 SLC11A1P49279 550 aa21.03■□□□□ 0.96
HLA-A-209ENST00000638375 MCCD1P59942 119 aaPredicted RBP21.03■□□□□ 0.96
HLA-A-209ENST00000638375 DLG4P78352 724 aa21.03■□□□□ 0.96
HLA-A-209ENST00000638375 TFAMQ00059 246 aaKnown RBP21.03■□□□□ 0.96
HLA-A-209ENST00000638375 C1orf220Q5T0J3 134 aa21.03■□□□□ 0.96
HLA-A-209ENST00000638375 SPOUT1Q5T280 376 aaKnown RBP21.03■□□□□ 0.96
HLA-A-209ENST00000638375 SPATA1Q5VX52 437 aa21.03■□□□□ 0.96
HLA-A-209ENST00000638375 INTS8Q75QN2 995 aaKnown RBP21.03■□□□□ 0.96
HLA-A-209ENST00000638375 NT5DC4Q86YG4 428 aa21.03■□□□□ 0.96
HLA-A-209ENST00000638375 IRF2BP1Q8IU81 584 aa21.03■□□□□ 0.96
HLA-A-209ENST00000638375 COLGALT1Q8NBJ5 622 aa21.03■□□□□ 0.96
HLA-A-209ENST00000638375 OR5B17Q8NGF7 314 aa21.03■□□□□ 0.96
HLA-A-209ENST00000638375 TMC2Q8TDI7 906 aa21.03■□□□□ 0.96
HLA-A-209ENST00000638375 TIFAQ96CG3 184 aa21.03■□□□□ 0.96
HLA-A-209ENST00000638375 FNBP1Q96RU3 617 aa21.03■□□□□ 0.96
HLA-A-209ENST00000638375 TMEM175Q9BSA9 504 aa21.03■□□□□ 0.96
HLA-A-209ENST00000638375 C17orf80Q9BSJ5 609 aa21.03■□□□□ 0.96
HLA-A-209ENST00000638375 INTS13Q9NVM9 706 aa21.03■□□□□ 0.96
HLA-A-209ENST00000638375 KIAA1671Q9BY89 1806 aa21.02■□□□□ 0.96
HLA-A-209ENST00000638375 GALTP07902 379 aa21.02■□□□□ 0.96
HLA-A-209ENST00000638375 LAG3P18627 525 aa21.02■□□□□ 0.96
HLA-A-209ENST00000638375 CYP3A5P20815 502 aa21.02■□□□□ 0.96
HLA-A-209ENST00000638375 VAMP7P51809 220 aa21.02■□□□□ 0.96
HLA-A-209ENST00000638375 BCAR1P56945 870 aa21.02■□□□□ 0.96
HLA-A-209ENST00000638375 CLDN10P78369 228 aa21.02■□□□□ 0.96
HLA-A-209ENST00000638375 BFSP1Q12934 665 aa21.02■□□□□ 0.96
HLA-A-209ENST00000638375 NCAPHQ15003 741 aa21.02■□□□□ 0.96
HLA-A-209ENST00000638375 TPD52L1Q16890 204 aaPredicted RBP21.02■□□□□ 0.96
HLA-A-209ENST00000638375 PPP2R2DQ66LE6 453 aa21.02■□□□□ 0.96
HLA-A-209ENST00000638375 KCNT2Q6UVM3 1135 aa21.02■□□□□ 0.96
HLA-A-209ENST00000638375 WDR49Q8IV35 697 aa21.02■□□□□ 0.96
HLA-A-209ENST00000638375 BEST2Q8NFU1 509 aa21.02■□□□□ 0.96
HLA-A-209ENST00000638375 ZNF516Q92618 1163 aa21.02■□□□□ 0.96
HLA-A-209ENST00000638375 RABGGTAQ92696 567 aa21.02■□□□□ 0.96
HLA-A-209ENST00000638375 BPIFA3Q9BQP9 254 aa21.02■□□□□ 0.96
HLA-A-209ENST00000638375 NFE2L3Q9Y4A8 694 aa21.02■□□□□ 0.96
HLA-A-209ENST00000638375 LAMA2P24043 3122 aaKnown RBP21.01■□□□□ 0.95
HLA-A-209ENST00000638375 NT5C1B-RDH14C9J2C7 533 aa21.01■□□□□ 0.95
HLA-A-209ENST00000638375 NRP1O14786 923 aa21.01■□□□□ 0.95
HLA-A-209ENST00000638375 FGFR1OPO95684 399 aaKnown RBP21.01■□□□□ 0.95
HLA-A-209ENST00000638375 TRIM49P0CI25 452 aa21.01■□□□□ 0.95
HLA-A-209ENST00000638375 TRIM49CP0CI26 452 aa21.01■□□□□ 0.95
HLA-A-209ENST00000638375 KRT13P13646 458 aa21.01■□□□□ 0.95
HLA-A-209ENST00000638375 TNNI1P19237 187 aa21.01■□□□□ 0.95
HLA-A-209ENST00000638375 IGFBP6P24592 240 aaPredicted RBP21.01■□□□□ 0.95
HLA-A-209ENST00000638375 OR1G1P47890 313 aa21.01■□□□□ 0.95
HLA-A-209ENST00000638375 ERVK-21P61565 698 aa21.01■□□□□ 0.95
HLA-A-209ENST00000638375 ENPEPQ07075 957 aa21.01■□□□□ 0.95
HLA-A-209ENST00000638375 CCDC40Q4G0X9 1142 aa21.01■□□□□ 0.95
HLA-A-209ENST00000638375 LRSAM1Q6UWE0 723 aa21.01■□□□□ 0.95
HLA-A-209ENST00000638375 FRMD5Q7Z6J6 570 aa21.01■□□□□ 0.95
HLA-A-209ENST00000638375 TMEM173Q86WV6 379 aaPredicted RBP21.01■□□□□ 0.95
HLA-A-209ENST00000638375 ZNF558Q96NG5 402 aa21.01■□□□□ 0.95
HLA-A-209ENST00000638375 TGS1Q96RS0 853 aaKnown RBP21.01■□□□□ 0.95
HLA-A-209ENST00000638375 MTMR12Q9C0I1 747 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms