RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 PRMT7Q9NVM4 692 aaPredicted RBP23.32■■□□□ 1.32
CHRNA7-228ENST00000637519 SNX12Q9UMY4 172 aa23.32■■□□□ 1.32
CHRNA7-228ENST00000637519 GABRQQ9UN88 632 aa23.32■■□□□ 1.32
CHRNA7-228ENST00000637519 TMEM88BA6NKF7 163 aa23.31■■□□□ 1.32
CHRNA7-228ENST00000637519 CA12O43570 354 aa23.31■■□□□ 1.32
CHRNA7-228ENST00000637519 CST3P01034 146 aaPredicted RBP23.31■■□□□ 1.32
CHRNA7-228ENST00000637519 MYL3P08590 195 aa23.31■■□□□ 1.32
CHRNA7-228ENST00000637519 CAP1Q01518 475 aa23.31■■□□□ 1.32
CHRNA7-228ENST00000637519 GCNT1Q02742 428 aa23.31■■□□□ 1.32
CHRNA7-228ENST00000637519 WDR44Q5JSH3 913 aa23.31■■□□□ 1.32
CHRNA7-228ENST00000637519 TRPV1Q8NER1 839 aa23.31■■□□□ 1.32
CHRNA7-228ENST00000637519 ARHGEF26Q96DR7 871 aa23.31■■□□□ 1.32
CHRNA7-228ENST00000637519 OSGEPQ9NPF4 335 aa23.31■■□□□ 1.32
CHRNA7-228ENST00000637519 SMARCAL1Q9NZC9 954 aa23.31■■□□□ 1.32
CHRNA7-228ENST00000637519 TNFSF13BQ9Y275 285 aa23.31■■□□□ 1.32
CHRNA7-228ENST00000637519 PCDHGC5Q9Y5F6 944 aa23.31■■□□□ 1.32
CHRNA7-228ENST00000637519 PDE2AO00408 941 aaPredicted RBP23.31■■□□□ 1.32
CHRNA7-228ENST00000637519 AOC2O75106 756 aa23.31■■□□□ 1.32
CHRNA7-228ENST00000637519 CYP11B1P15538 503 aa23.31■■□□□ 1.32
CHRNA7-228ENST00000637519 ZSCAN20P17040 1043 aaPredicted RBP23.31■■□□□ 1.32
CHRNA7-228ENST00000637519 ARF4P18085 180 aaPredicted RBP23.31■■□□□ 1.32
CHRNA7-228ENST00000637519 TM4SF4P48230 202 aa23.31■■□□□ 1.32
CHRNA7-228ENST00000637519 MFSD10Q14728 455 aa23.31■■□□□ 1.32
CHRNA7-228ENST00000637519 RUFY4Q6ZNE9 571 aa23.31■■□□□ 1.32
CHRNA7-228ENST00000637519 GOLGA1Q92805 767 aa23.31■■□□□ 1.32
CHRNA7-228ENST00000637519 THAP2Q9H0W7 228 aa23.31■■□□□ 1.32
CHRNA7-228ENST00000637519 PDZD7Q9H5P4 517 aa23.31■■□□□ 1.32
CHRNA7-228ENST00000637519 EHD2Q9NZN4 543 aa23.31■■□□□ 1.32
CHRNA7-228ENST00000637519 NUB1Q9Y5A7 615 aa23.31■■□□□ 1.32
CHRNA7-228ENST00000637519 MYADML2A6NDP7 307 aa23.3■■□□□ 1.32
CHRNA7-228ENST00000637519 MEFVO15553 781 aaPredicted RBP23.3■■□□□ 1.32
CHRNA7-228ENST00000637519 ZC3H11AO75152 810 aaKnown RBP eCLIP23.3■■□□□ 1.32
CHRNA7-228ENST00000637519 IGHA2P01877 340 aa23.3■■□□□ 1.32
CHRNA7-228ENST00000637519 NOP14P78316 857 aaKnown RBP23.3■■□□□ 1.32
CHRNA7-228ENST00000637519 ZNF200P98182 395 aaPredicted RBP23.3■■□□□ 1.32
CHRNA7-228ENST00000637519 TFAMQ00059 246 aaKnown RBP23.3■■□□□ 1.32
CHRNA7-228ENST00000637519 NCOA4Q13772 614 aa23.3■■□□□ 1.32
CHRNA7-228ENST00000637519 TUBB2AQ13885 445 aa23.3■■□□□ 1.32
CHRNA7-228ENST00000637519 FBXO38Q6PIJ6 1188 aa23.3■■□□□ 1.32
CHRNA7-228ENST00000637519 WDR49Q8IV35 697 aa23.3■■□□□ 1.32
CHRNA7-228ENST00000637519 SMC1BQ8NDV3 1235 aa23.3■■□□□ 1.32
CHRNA7-228ENST00000637519 VTI1AQ96AJ9 217 aa23.3■■□□□ 1.32
CHRNA7-228ENST00000637519 TUBB2BQ9BVA1 445 aa23.3■■□□□ 1.32
CHRNA7-228ENST00000637519 CHORDC1Q9UHD1 332 aaPredicted RBP23.3■■□□□ 1.32
CHRNA7-228ENST00000637519 BTNL10A8MVZ5 291 aa23.29■■□□□ 1.32
CHRNA7-228ENST00000637519 PSMC4P43686 418 aa23.29■■□□□ 1.32
CHRNA7-228ENST00000637519 FMO1Q01740 532 aa23.29■■□□□ 1.32
CHRNA7-228ENST00000637519 NOA1Q8NC60 698 aaKnown RBP23.29■■□□□ 1.32
CHRNA7-228ENST00000637519 CDHR5Q9HBB8 845 aa23.29■■□□□ 1.32
CHRNA7-228ENST00000637519 DNAH12Q6ZR08 3092 aa23.29■■□□□ 1.32
CHRNA7-228ENST00000637519 HTTP42858 3142 aa23.29■■□□□ 1.32
CHRNA7-228ENST00000637519 ZEB2O60315 1214 aa23.29■■□□□ 1.32
CHRNA7-228ENST00000637519 TSPAN1O60635 241 aa23.29■■□□□ 1.32
CHRNA7-228ENST00000637519 PDE6CP51160 858 aa23.29■■□□□ 1.32
CHRNA7-228ENST00000637519 IFNLR1Q8IU57 520 aaPredicted RBP23.29■■□□□ 1.32
CHRNA7-228ENST00000637519 OSBPL9Q96SU4 736 aa23.29■■□□□ 1.32
CHRNA7-228ENST00000637519 CTAGE15A4D2H0 777 aa23.28■■□□□ 1.32
CHRNA7-228ENST00000637519 CTAGE8P0CG41 777 aa23.28■■□□□ 1.32
CHRNA7-228ENST00000637519 POU5F1BQ06416 359 aa23.28■■□□□ 1.32
CHRNA7-228ENST00000637519 FAM187BQ17R55 369 aa23.28■■□□□ 1.32
CHRNA7-228ENST00000637519 CTAGE6Q86UF2 777 aa23.28■■□□□ 1.32
CHRNA7-228ENST00000637519 CTAGE4Q8IX94 777 aa23.28■■□□□ 1.32
CHRNA7-228ENST00000637519 TRIB2Q92519 343 aa23.28■■□□□ 1.32
CHRNA7-228ENST00000637519 MYL6P60660 151 aa23.28■■□□□ 1.32
CHRNA7-228ENST00000637519 CUL2Q13617 745 aa23.28■■□□□ 1.32
CHRNA7-228ENST00000637519 TPCN2Q8NHX9 752 aa23.28■■□□□ 1.32
CHRNA7-228ENST00000637519 CAGE1Q8TC20 777 aa23.28■■□□□ 1.32
CHRNA7-228ENST00000637519 DDX1Q92499 740 aaKnown RBP23.28■■□□□ 1.32
CHRNA7-228ENST00000637519 AP5M1Q9H0R1 490 aa23.28■■□□□ 1.32
CHRNA7-228ENST00000637519 RNF216Q9NWF9 866 aaPredicted RBP23.28■■□□□ 1.32
CHRNA7-228ENST00000637519 ATMINO43313 823 aaPredicted RBP23.27■■□□□ 1.32
CHRNA7-228ENST00000637519 FTLP02792 175 aaPredicted RBP23.27■■□□□ 1.32
CHRNA7-228ENST00000637519 CLTAP09496 248 aa23.27■■□□□ 1.32
CHRNA7-228ENST00000637519 TMEM253P0C7T8 217 aa23.27■■□□□ 1.32
CHRNA7-228ENST00000637519 STAG3L1P0CL83 205 aa23.27■■□□□ 1.32
CHRNA7-228ENST00000637519 PSEN2P49810 448 aa23.27■■□□□ 1.32
CHRNA7-228ENST00000637519 TRIM32Q13049 653 aa23.27■■□□□ 1.32
CHRNA7-228ENST00000637519 HSP90AA2PQ14568 343 aaPredicted RBP23.27■■□□□ 1.32
CHRNA7-228ENST00000637519 LRRC57Q8N9N7 239 aa23.27■■□□□ 1.32
CHRNA7-228ENST00000637519 CTNNBL1Q8WYA6 563 aaPredicted RBP23.27■■□□□ 1.32
CHRNA7-228ENST00000637519 INTUQ9ULD6 942 aa23.27■■□□□ 1.32
CHRNA7-228ENST00000637519 HYOU1Q9Y4L1 999 aa23.27■■□□□ 1.32
CHRNA7-228ENST00000637519 MGAMO43451 1857 aa23.27■■□□□ 1.32
CHRNA7-228ENST00000637519 KAT6AQ92794 2004 aa23.27■■□□□ 1.32
CHRNA7-228ENST00000637519 NFICP08651 508 aa23.26■■□□□ 1.31
CHRNA7-228ENST00000637519 ACO1P21399 889 aaKnown RBP23.26■■□□□ 1.31
CHRNA7-228ENST00000637519 SSTR3P32745 418 aaPredicted RBP23.26■■□□□ 1.31
CHRNA7-228ENST00000637519 CPT1AP50416 773 aa23.26■■□□□ 1.31
CHRNA7-228ENST00000637519 FSCN1Q16658 493 aaKnown RBP23.26■■□□□ 1.31
CHRNA7-228ENST00000637519 CREG2Q8IUH2 290 aa23.26■■□□□ 1.31
CHRNA7-228ENST00000637519 PDCL2Q8N4E4 241 aa23.26■■□□□ 1.31
CHRNA7-228ENST00000637519 SLC35G2Q8TBE7 412 aa23.26■■□□□ 1.31
CHRNA7-228ENST00000637519 OSMRQ99650 979 aa23.26■■□□□ 1.31
CHRNA7-228ENST00000637519 RPF1Q9H9Y2 349 aaKnown RBP23.26■■□□□ 1.31
CHRNA7-228ENST00000637519 NRCAMQ92823 1304 aa23.26■■□□□ 1.31
CHRNA7-228ENST00000637519 RRN3P2A6NIE6 340 aa23.26■■□□□ 1.31
CHRNA7-228ENST00000637519 TREHO43280 583 aa23.26■■□□□ 1.31
CHRNA7-228ENST00000637519 ERLIN2O94905 339 aa23.26■■□□□ 1.31
CHRNA7-228ENST00000637519 TMEM191BP0C7N4 346 aa23.26■■□□□ 1.31
CHRNA7-228ENST00000637519 CYP2C9P11712 490 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms