RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 MTCL1Q9Y4B5 1905 aaKnown RBP20.26■□□□□ 0.83
CLN6-220ENST00000637450 TRAPPC3O43617 180 aa20.26■□□□□ 0.83
CLN6-220ENST00000637450 NTHL1P78549 312 aa20.26■□□□□ 0.83
CLN6-220ENST00000637450 RSPO2Q6UXX9 243 aaPredicted RBP20.26■□□□□ 0.83
CLN6-220ENST00000637450 CCDC105Q8IYK2 499 aa20.26■□□□□ 0.83
CLN6-220ENST00000637450 TARS2Q9BW92 718 aaKnown RBP20.26■□□□□ 0.83
CLN6-220ENST00000637450 GOLGA2P5Q9HBQ8 144 aa20.26■□□□□ 0.83
CLN6-220ENST00000637450 TOPORSQ9NS56 1045 aaPredicted RBP20.26■□□□□ 0.83
CLN6-220ENST00000637450 BACE2Q9Y5Z0 518 aa20.26■□□□□ 0.83
CLN6-220ENST00000637450 CFAP54Q96N23 3096 aa20.26■□□□□ 0.83
CLN6-220ENST00000637450 VPS13AQ96RL7 3174 aa20.25■□□□□ 0.83
CLN6-220ENST00000637450 ABLIM1O14639 778 aa20.25■□□□□ 0.83
CLN6-220ENST00000637450 CCL16O15467 120 aa20.25■□□□□ 0.83
CLN6-220ENST00000637450 XYLBO75191 536 aa20.25■□□□□ 0.83
CLN6-220ENST00000637450 POU2F2P09086 479 aa20.25■□□□□ 0.83
CLN6-220ENST00000637450 MCF2P10911 925 aa20.25■□□□□ 0.83
CLN6-220ENST00000637450 PROZP22891 400 aa20.25■□□□□ 0.83
CLN6-220ENST00000637450 TKTP29401 623 aaKnown RBP20.25■□□□□ 0.83
CLN6-220ENST00000637450 OSTNP61366 133 aa20.25■□□□□ 0.83
CLN6-220ENST00000637450 SOX4Q06945 474 aaPredicted RBP20.25■□□□□ 0.83
CLN6-220ENST00000637450 RABEP1Q15276 862 aa20.25■□□□□ 0.83
CLN6-220ENST00000637450 ZNF568Q3ZCX4 644 aa20.25■□□□□ 0.83
CLN6-220ENST00000637450 RILPL1Q5EBL4 403 aa20.25■□□□□ 0.83
CLN6-220ENST00000637450 HYIQ5T013 277 aa20.25■□□□□ 0.83
CLN6-220ENST00000637450 AXDND1Q5T1B0 1012 aaPredicted RBP20.25■□□□□ 0.83
CLN6-220ENST00000637450 DTWD2Q8NBA8 298 aa20.25■□□□□ 0.83
CLN6-220ENST00000637450 C3orf58Q8NDZ4 430 aa20.25■□□□□ 0.83
CLN6-220ENST00000637450 SLC7A14Q8TBB6 771 aa20.25■□□□□ 0.83
CLN6-220ENST00000637450 GPR152Q8TDT2 470 aa20.25■□□□□ 0.83
CLN6-220ENST00000637450 DDX27Q96GQ7 796 aaKnown RBP20.25■□□□□ 0.83
CLN6-220ENST00000637450 TIPINQ9BVW5 301 aa20.25■□□□□ 0.83
CLN6-220ENST00000637450 CDH7Q9ULB5 785 aa20.25■□□□□ 0.83
CLN6-220ENST00000637450 KIF3AQ9Y496 699 aa20.25■□□□□ 0.83
CLN6-220ENST00000637450 CDY1Q9Y6F8 540 aa20.25■□□□□ 0.83
CLN6-220ENST00000637450 NUMBLQ9Y6R0 609 aa20.25■□□□□ 0.83
CLN6-220ENST00000637450 PTPRZ1P23471 2315 aaPredicted RBP20.24■□□□□ 0.83
CLN6-220ENST00000637450 DOCK8Q8NF50 2099 aa20.24■□□□□ 0.83
CLN6-220ENST00000637450 SFI1A8K8P3 1242 aa20.24■□□□□ 0.83
CLN6-220ENST00000637450 STK25O00506 426 aa20.24■□□□□ 0.83
CLN6-220ENST00000637450 GUCY2CP25092 1073 aa20.24■□□□□ 0.83
CLN6-220ENST00000637450 BRCC3P46736 316 aa20.24■□□□□ 0.83
CLN6-220ENST00000637450 ATP2C1P98194 919 aaPredicted RBP20.24■□□□□ 0.83
CLN6-220ENST00000637450 MCTP1Q6DN14 999 aa20.24■□□□□ 0.83
CLN6-220ENST00000637450 ANKS3Q6ZW76 656 aa20.24■□□□□ 0.83
CLN6-220ENST00000637450 RTL10Q7L3V2 364 aa20.24■□□□□ 0.83
CLN6-220ENST00000637450 KCTD17Q8N5Z5 321 aa20.24■□□□□ 0.83
CLN6-220ENST00000637450 ST13P5Q8NFI4 369 aaPredicted RBP20.24■□□□□ 0.83
CLN6-220ENST00000637450 ZMAT2Q96NC0 199 aaKnown RBP20.24■□□□□ 0.83
CLN6-220ENST00000637450 ACAP3Q96P50 834 aa20.24■□□□□ 0.83
CLN6-220ENST00000637450 TCHPQ9BT92 498 aa20.24■□□□□ 0.83
CLN6-220ENST00000637450 SLC2A4RGQ9NR83 387 aa20.24■□□□□ 0.83
CLN6-220ENST00000637450 SLC38A7Q9NVC3 462 aa20.24■□□□□ 0.83
CLN6-220ENST00000637450 CA14Q9ULX7 337 aa20.24■□□□□ 0.83
CLN6-220ENST00000637450 I3L4J1 428 aa20.23■□□□□ 0.83
CLN6-220ENST00000637450 SLC16A4O15374 487 aa20.23■□□□□ 0.83
CLN6-220ENST00000637450 KCNE1P15382 129 aa20.23■□□□□ 0.83
CLN6-220ENST00000637450 PARM1Q6UWI2 310 aa20.23■□□□□ 0.83
CLN6-220ENST00000637450 MPZL3Q6UWV2 235 aa20.23■□□□□ 0.83
CLN6-220ENST00000637450 ASCL5Q7RTU5 278 aa20.23■□□□□ 0.83
CLN6-220ENST00000637450 SPIRE2Q8WWL2 714 aa20.23■□□□□ 0.83
CLN6-220ENST00000637450 FGF13Q92913 245 aa20.23■□□□□ 0.83
CLN6-220ENST00000637450 FGF14Q92915 247 aa20.23■□□□□ 0.83
CLN6-220ENST00000637450 SNX27Q96L92 541 aa20.23■□□□□ 0.83
CLN6-220ENST00000637450 PNMA5Q96PV4 448 aa20.23■□□□□ 0.83
CLN6-220ENST00000637450 RPP25Q9BUL9 199 aaKnown RBP20.23■□□□□ 0.83
CLN6-220ENST00000637450 KCNG1Q9UIX4 513 aa20.23■□□□□ 0.83
CLN6-220ENST00000637450 POLIQ9UNA4 740 aa20.23■□□□□ 0.83
CLN6-220ENST00000637450 RIF1Q5UIP0 2472 aaKnown RBP20.22■□□□□ 0.83
CLN6-220ENST00000637450 PODXLO00592 558 aa20.22■□□□□ 0.83
CLN6-220ENST00000637450 ANGPT1Q15389 498 aa20.22■□□□□ 0.83
CLN6-220ENST00000637450 ZRSR1Q15695 479 aaKnown RBP20.22■□□□□ 0.83
CLN6-220ENST00000637450 PHLDB3Q6NSJ2 640 aa20.22■□□□□ 0.83
CLN6-220ENST00000637450 SYT2Q8N9I0 419 aaPredicted RBP20.22■□□□□ 0.83
CLN6-220ENST00000637450 TMEM161BQ8NDZ6 487 aa20.22■□□□□ 0.83
CLN6-220ENST00000637450 ITFG1Q8TB96 612 aa20.22■□□□□ 0.83
CLN6-220ENST00000637450 ZBTB45Q96K62 511 aaPredicted RBP20.22■□□□□ 0.83
CLN6-220ENST00000637450 TBC1D17Q9HA65 648 aa20.22■□□□□ 0.83
CLN6-220ENST00000637450 CNTN3Q9P232 1028 aa20.22■□□□□ 0.83
CLN6-220ENST00000637450 DNMT3BQ9UBC3 853 aaKnown RBP20.22■□□□□ 0.83
CLN6-220ENST00000637450 PRR23AA6NEV1 266 aa20.21■□□□□ 0.83
CLN6-220ENST00000637450 MEFVO15553 781 aaPredicted RBP20.21■□□□□ 0.83
CLN6-220ENST00000637450 TOM1L1O75674 476 aa20.21■□□□□ 0.83
CLN6-220ENST00000637450 PLS3P13797 630 aa20.21■□□□□ 0.83
CLN6-220ENST00000637450 RPL9P32969 192 aaKnown RBP20.21■□□□□ 0.83
CLN6-220ENST00000637450 RAD51AP2Q09MP3 1159 aa20.21■□□□□ 0.83
CLN6-220ENST00000637450 SLC8B1Q6J4K2 584 aa20.21■□□□□ 0.83
CLN6-220ENST00000637450 FRMD5Q7Z6J6 570 aa20.21■□□□□ 0.83
CLN6-220ENST00000637450 ZNF461Q8TAF7 563 aa20.21■□□□□ 0.83
CLN6-220ENST00000637450 TMX3Q96JJ7 454 aa20.21■□□□□ 0.83
CLN6-220ENST00000637450 ARHGEF3Q9NR81 526 aa20.21■□□□□ 0.83
CLN6-220ENST00000637450 HCFC1R1Q9NWW0 138 aa20.21■□□□□ 0.83
CLN6-220ENST00000637450 KCNH3Q9ULD8 1083 aa20.21■□□□□ 0.83
CLN6-220ENST00000637450 VWA8A3KMH1 1905 aa20.2■□□□□ 0.82
CLN6-220ENST00000637450 VWA3AA6NCI4 1184 aa20.2■□□□□ 0.82
CLN6-220ENST00000637450 TBC1D4O60343 1298 aa20.2■□□□□ 0.82
CLN6-220ENST00000637450 ABLIM3O94929 683 aa20.2■□□□□ 0.82
CLN6-220ENST00000637450 RFX1P22670 979 aa20.2■□□□□ 0.82
CLN6-220ENST00000637450 GJB2P29033 226 aa20.2■□□□□ 0.82
CLN6-220ENST00000637450 SMTNP53814 917 aa20.2■□□□□ 0.82
CLN6-220ENST00000637450 SLC12A3P55017 1021 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms