RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 FOXD4L6Q3SYB3 417 aaPredicted RBP15.08■□□□□ 0
PNKP-228ENST00000637325 SEZ6Q53EL9 994 aa15.08■□□□□ 0
PNKP-228ENST00000637325 XKR4Q5GH76 650 aa15.08■□□□□ 0
PNKP-228ENST00000637325 PDXDC1Q6P996 788 aa15.08■□□□□ 0
PNKP-228ENST00000637325 ALKAL1Q6UXT8 129 aa15.08■□□□□ 0
PNKP-228ENST00000637325 FOXD4L3Q6VB84 417 aaPredicted RBP15.08■□□□□ 0
PNKP-228ENST00000637325 LINC00301Q8NCQ3 95 aa15.08■□□□□ 0
PNKP-228ENST00000637325 DDX27Q96GQ7 796 aaKnown RBP15.08■□□□□ 0
PNKP-228ENST00000637325 POMKQ9H5K3 350 aa15.08■□□□□ 0
PNKP-228ENST00000637325 GOLGA2P5Q9HBQ8 144 aa15.08■□□□□ 0
PNKP-228ENST00000637325 MUTYHQ9UIF7 546 aa15.08■□□□□ 0
PNKP-228ENST00000637325 CDH22Q9UJ99 828 aa15.08■□□□□ 0
PNKP-228ENST00000637325 DENND4AQ7Z401 1863 aa15.08■□□□□ 0
PNKP-228ENST00000637325 TMEM189-UBE2V1I3L0A0 370 aa15.07■□□□□ 0
PNKP-228ENST00000637325 TRAPPC3O43617 180 aa15.07■□□□□ 0
PNKP-228ENST00000637325 GPR37L1O60883 481 aa15.07■□□□□ 0
PNKP-228ENST00000637325 F13A1P00488 732 aa15.07■□□□□ 0
PNKP-228ENST00000637325 SPATA31D3P0C874 917 aa15.07■□□□□ 0
PNKP-228ENST00000637325 MYBP10242 640 aa15.07■□□□□ 0
PNKP-228ENST00000637325 RPL17P18621 184 aaKnown RBP15.07■□□□□ 0
PNKP-228ENST00000637325 PSMD5Q16401 504 aa15.07■□□□□ 0
PNKP-228ENST00000637325 KYAT1Q16773 422 aa15.07■□□□□ 0
PNKP-228ENST00000637325 UPP1Q16831 310 aa15.07■□□□□ 0
PNKP-228ENST00000637325 RTP2Q5QGT7 225 aa15.07■□□□□ 0
PNKP-228ENST00000637325 PRSS55Q6UWB4 352 aaPredicted RBP15.07■□□□□ 0
PNKP-228ENST00000637325 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.07■□□□□ 0
PNKP-228ENST00000637325 SPATA31D4Q6ZUB0 917 aa15.07■□□□□ 0
PNKP-228ENST00000637325 DDX12PQ92771 950 aa15.07■□□□□ 0
PNKP-228ENST00000637325 KCNN1Q92952 543 aa15.07■□□□□ 0
PNKP-228ENST00000637325 LRFN3Q9BTN0 628 aa15.07■□□□□ 0
PNKP-228ENST00000637325 CNTN3Q9P232 1028 aa15.07■□□□□ 0
PNKP-228ENST00000637325 TECTAO75443 2155 aa15.07■□□□□ 0
PNKP-228ENST00000637325 MYMKA6NI61 221 aa15.06■□□□□ 0
PNKP-228ENST00000637325 PODXLO00592 558 aa15.06■□□□□ 0
PNKP-228ENST00000637325 PPP6R2O75170 966 aa15.06■□□□□ 0
PNKP-228ENST00000637325 YEATS4O95619 227 aa15.06■□□□□ 0
PNKP-228ENST00000637325 CLTAP09496 248 aa15.06■□□□□ 0
PNKP-228ENST00000637325 GAP43P17677 238 aa15.06■□□□□ 0
PNKP-228ENST00000637325 COL9A1P20849 921 aa15.06■□□□□ 0
PNKP-228ENST00000637325 RPL9P32969 192 aaKnown RBP15.06■□□□□ 0
PNKP-228ENST00000637325 GTF2BQ00403 316 aa15.06■□□□□ 0
PNKP-228ENST00000637325 SLC10A6Q3KNW5 377 aa15.06■□□□□ 0
PNKP-228ENST00000637325 HERC4Q5GLZ8 1057 aaPredicted RBP15.06■□□□□ 0
PNKP-228ENST00000637325 GPR149Q86SP6 731 aa15.06■□□□□ 0
PNKP-228ENST00000637325 PDILTQ8N807 584 aa15.06■□□□□ 0
PNKP-228ENST00000637325 HDAC7Q8WUI4 952 aa15.06■□□□□ 0
PNKP-228ENST00000637325 PIK3R5Q8WYR1 880 aa15.06■□□□□ 0
PNKP-228ENST00000637325 ZMAT2Q96NC0 199 aaKnown RBP15.06■□□□□ 0
PNKP-228ENST00000637325 MSTO1Q9BUK6 570 aa15.06■□□□□ 0
PNKP-228ENST00000637325 PLEKHA4Q9H4M7 779 aa15.06■□□□□ 0
PNKP-228ENST00000637325 MRPL44Q9H9J2 332 aaKnown RBP15.06■□□□□ 0
PNKP-228ENST00000637325 RPF1Q9H9Y2 349 aaKnown RBP15.06■□□□□ 0
PNKP-228ENST00000637325 PLEKHA5Q9HAU0 1116 aa15.06■□□□□ 0
PNKP-228ENST00000637325 NUB1Q9Y5A7 615 aa15.06■□□□□ 0
PNKP-228ENST00000637325 DOCK8Q8NF50 2099 aa15.05■□□□□ 0
PNKP-228ENST00000637325 CCDC195A0A1B0GUA6 201 aa15.05■□□□□ -0
PNKP-228ENST00000637325 OGTO15294 1046 aa15.05■□□□□ -0
PNKP-228ENST00000637325 TGM5O43548 720 aa15.05■□□□□ -0
PNKP-228ENST00000637325 C1RP00736 705 aa15.05■□□□□ -0
PNKP-228ENST00000637325 PIGRP01833 764 aa15.05■□□□□ -0
PNKP-228ENST00000637325 CXCL8P10145 99 aa15.05■□□□□ -0
PNKP-228ENST00000637325 IDEP14735 1019 aa15.05■□□□□ -0
PNKP-228ENST00000637325 PPP2R3AQ06190 1150 aa15.05■□□□□ -0
PNKP-228ENST00000637325 SOX4Q06945 474 aaPredicted RBP15.05■□□□□ -0
PNKP-228ENST00000637325 ZC2HC1CQ53FD0 456 aaPredicted RBP15.05■□□□□ -0
PNKP-228ENST00000637325 SFR1Q86XK3 245 aa15.05■□□□□ -0
PNKP-228ENST00000637325 TDRD5Q8NAT2 981 aaKnown RBP15.05■□□□□ -0
PNKP-228ENST00000637325 LNX1Q8TBB1 728 aaPredicted RBP15.05■□□□□ -0
PNKP-228ENST00000637325 C18orf25Q96B23 403 aaPredicted RBP15.05■□□□□ -0
PNKP-228ENST00000637325 HAPLN2Q9GZV7 340 aa15.05■□□□□ -0
PNKP-228ENST00000637325 PIDD1Q9HB75 910 aa15.05■□□□□ -0
PNKP-228ENST00000637325 SEL1LQ9UBV2 794 aa15.05■□□□□ -0
PNKP-228ENST00000637325 A0A087X0B3 334 aa15.04■□□□□ -0
PNKP-228ENST00000637325 I3L4J1 428 aa15.04■□□□□ -0
PNKP-228ENST00000637325 CUTAO60888 179 aa15.04■□□□□ -0
PNKP-228ENST00000637325 FGFR3P22607 806 aa15.04■□□□□ -0
PNKP-228ENST00000637325 TNFSF9P41273 254 aa15.04■□□□□ -0
PNKP-228ENST00000637325 BRCC3P46736 316 aa15.04■□□□□ -0
PNKP-228ENST00000637325 SPAG1Q07617 926 aa15.04■□□□□ -0
PNKP-228ENST00000637325 SLFN12LQ6IEE8 588 aa15.04■□□□□ -0
PNKP-228ENST00000637325 C15orf39Q6ZRI6 1047 aa15.04■□□□□ -0
PNKP-228ENST00000637325 CCDC149Q6ZUS6 474 aa15.04■□□□□ -0
PNKP-228ENST00000637325 ZNF720Q7Z2F6 126 aa15.04■□□□□ -0
PNKP-228ENST00000637325 MAP4K3Q8IVH8 894 aa15.04■□□□□ -0
PNKP-228ENST00000637325 KREMEN2Q8NCW0 462 aa15.04■□□□□ -0
PNKP-228ENST00000637325 CMASQ8NFW8 434 aaPredicted RBP15.04■□□□□ -0
PNKP-228ENST00000637325 ACSF2Q96CM8 615 aaPredicted RBP15.04■□□□□ -0
PNKP-228ENST00000637325 HVCN1Q96D96 273 aa15.04■□□□□ -0
PNKP-228ENST00000637325 FAM212AQ96EL1 285 aa15.04■□□□□ -0
PNKP-228ENST00000637325 KIF12Q96FN5 646 aa15.04■□□□□ -0
PNKP-228ENST00000637325 FIZ1Q96SL8 496 aa15.04■□□□□ -0
PNKP-228ENST00000637325 CLSTN3Q9BQT9 956 aa15.04■□□□□ -0
PNKP-228ENST00000637325 LRRC27Q9C0I9 530 aa15.04■□□□□ -0
PNKP-228ENST00000637325 ST6GALNAC4Q9H4F1 302 aa15.04■□□□□ -0
PNKP-228ENST00000637325 TBC1D7Q9P0N9 293 aa15.04■□□□□ -0
PNKP-228ENST00000637325 CFAP45Q9UL16 551 aa15.04■□□□□ -0
PNKP-228ENST00000637325 EXOC7Q9UPT5 735 aa15.04■□□□□ -0
PNKP-228ENST00000637325 TRIOO75962 3097 aa15.04■□□□□ -0
PNKP-228ENST00000637325 SCN1AP35498 2009 aa15.04■□□□□ -0
PNKP-228ENST00000637325 A0A0B4J269 797 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms