RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 BRSK2Q8IWQ3 736 aa18.69■□□□□ 0.58
CLN6-218ENST00000637223 TRIML1Q8N9V2 468 aa18.69■□□□□ 0.58
CLN6-218ENST00000637223 KLHL23Q8NBE8 558 aa18.69■□□□□ 0.58
CLN6-218ENST00000637223 XXYLT1Q8NBI6 393 aa18.69■□□□□ 0.58
CLN6-218ENST00000637223 RDH13Q8NBN7 331 aa18.69■□□□□ 0.58
CLN6-218ENST00000637223 RABGGTAQ92696 567 aa18.69■□□□□ 0.58
CLN6-218ENST00000637223 KIF12Q96FN5 646 aa18.69■□□□□ 0.58
CLN6-218ENST00000637223 TRAF3IP3Q9Y228 551 aa18.69■□□□□ 0.58
CLN6-218ENST00000637223 PRG3Q9Y2Y8 225 aaPredicted RBP18.69■□□□□ 0.58
CLN6-218ENST00000637223 FNDC1Q4ZHG4 1894 aaPredicted RBP18.69■□□□□ 0.58
CLN6-218ENST00000637223 BDP1A6H8Y1 2624 aa18.69■□□□□ 0.58
CLN6-218ENST00000637223 PPP1R3GB7ZBB8 358 aa18.68■□□□□ 0.58
CLN6-218ENST00000637223 C5orf67F2Z3F1 127 aa18.68■□□□□ 0.58
CLN6-218ENST00000637223 EXOC3O60645 756 aa18.68■□□□□ 0.58
CLN6-218ENST00000637223 ALDH7A1P49419 539 aaKnown RBP18.68■□□□□ 0.58
CLN6-218ENST00000637223 WNT7BP56706 349 aa18.68■□□□□ 0.58
CLN6-218ENST00000637223 TFF2Q03403 129 aa18.68■□□□□ 0.58
CLN6-218ENST00000637223 TUSC3Q13454 348 aa18.68■□□□□ 0.58
CLN6-218ENST00000637223 GPM6BQ13491 265 aa18.68■□□□□ 0.58
CLN6-218ENST00000637223 ZCWPW2Q504Y3 356 aa18.68■□□□□ 0.58
CLN6-218ENST00000637223 CCDC183Q5T5S1 534 aa18.68■□□□□ 0.58
CLN6-218ENST00000637223 JADE1Q6IE81 842 aa18.68■□□□□ 0.58
CLN6-218ENST00000637223 TMEM173Q86WV6 379 aaPredicted RBP18.68■□□□□ 0.58
CLN6-218ENST00000637223 MICALL1Q8N3F8 863 aa18.68■□□□□ 0.58
CLN6-218ENST00000637223 TMEM130Q8N3G9 435 aa18.68■□□□□ 0.58
CLN6-218ENST00000637223 C18orf25Q96B23 403 aaPredicted RBP18.68■□□□□ 0.58
CLN6-218ENST00000637223 TMEM175Q9BSA9 504 aa18.68■□□□□ 0.58
CLN6-218ENST00000637223 LRFN3Q9BTN0 628 aa18.68■□□□□ 0.58
CLN6-218ENST00000637223 PLVAPQ9BX97 442 aa18.68■□□□□ 0.58
CLN6-218ENST00000637223 GOLGA2P5Q9HBQ8 144 aa18.68■□□□□ 0.58
CLN6-218ENST00000637223 HCN4Q9Y3Q4 1203 aa18.68■□□□□ 0.58
CLN6-218ENST00000637223 ZNF233A6NK53 670 aa18.67■□□□□ 0.58
CLN6-218ENST00000637223 NRP1O14786 923 aa18.67■□□□□ 0.58
CLN6-218ENST00000637223 PSMA7O14818 248 aa18.67■□□□□ 0.58
CLN6-218ENST00000637223 FGF18O76093 207 aa18.67■□□□□ 0.58
CLN6-218ENST00000637223 CSPG5O95196 566 aa18.67■□□□□ 0.58
CLN6-218ENST00000637223 ALDH2P05091 517 aa18.67■□□□□ 0.58
CLN6-218ENST00000637223 RB1P06400 928 aa18.67■□□□□ 0.58
CLN6-218ENST00000637223 ADRB2P07550 413 aa18.67■□□□□ 0.58
CLN6-218ENST00000637223 NFICP08651 508 aa18.67■□□□□ 0.58
CLN6-218ENST00000637223 PMS1P54277 932 aaKnown RBP18.67■□□□□ 0.58
CLN6-218ENST00000637223 SOX4Q06945 474 aaPredicted RBP18.67■□□□□ 0.58
CLN6-218ENST00000637223 SNRNP35Q16560 246 aaKnown RBP18.67■□□□□ 0.58
CLN6-218ENST00000637223 CAVIN1Q6NZI2 390 aaKnown RBP18.67■□□□□ 0.58
CLN6-218ENST00000637223 CD302Q8IX05 232 aa18.67■□□□□ 0.58
CLN6-218ENST00000637223 SLC39A11Q8N1S5 342 aa18.67■□□□□ 0.58
CLN6-218ENST00000637223 BCL7CQ8WUZ0 217 aaPredicted RBP18.67■□□□□ 0.58
CLN6-218ENST00000637223 P2RX5Q93086 422 aa18.67■□□□□ 0.58
CLN6-218ENST00000637223 FBXL18Q96ME1 805 aa18.67■□□□□ 0.58
CLN6-218ENST00000637223 TSG101Q99816 390 aa18.67■□□□□ 0.58
CLN6-218ENST00000637223 PAAF1Q9BRP4 392 aa18.67■□□□□ 0.58
CLN6-218ENST00000637223 C11orf84Q9BUA3 381 aaPredicted RBP18.67■□□□□ 0.58
CLN6-218ENST00000637223 EPHX3Q9H6B9 360 aa18.67■□□□□ 0.58
CLN6-218ENST00000637223 KIAA1586Q9HCI6 787 aa18.67■□□□□ 0.58
CLN6-218ENST00000637223 ALG13Q9NP73 1137 aaKnown RBP18.67■□□□□ 0.58
CLN6-218ENST00000637223 SLC38A7Q9NVC3 462 aa18.67■□□□□ 0.58
CLN6-218ENST00000637223 DMAC2Q9NW81 257 aa18.67■□□□□ 0.58
CLN6-218ENST00000637223 SPG21Q9NZD8 308 aa18.67■□□□□ 0.58
CLN6-218ENST00000637223 TMEM63CQ9P1W3 806 aa18.67■□□□□ 0.58
CLN6-218ENST00000637223 TUBGCP4Q9UGJ1 667 aa18.67■□□□□ 0.58
CLN6-218ENST00000637223 CTNND2Q9UQB3 1225 aa18.67■□□□□ 0.58
CLN6-218ENST00000637223 FAN1Q9Y2M0 1017 aa18.67■□□□□ 0.58
CLN6-218ENST00000637223 ARIH1Q9Y4X5 557 aaPredicted RBP18.67■□□□□ 0.58
CLN6-218ENST00000637223 TRIM49BA6NDI0 452 aa18.66■□□□□ 0.58
CLN6-218ENST00000637223 F8W810 466 aa18.66■□□□□ 0.58
CLN6-218ENST00000637223 H3BNC9 293 aa18.66■□□□□ 0.58
CLN6-218ENST00000637223 GRM6O15303 877 aa18.66■□□□□ 0.58
CLN6-218ENST00000637223 IL18RAPO95256 599 aa18.66■□□□□ 0.58
CLN6-218ENST00000637223 ITGB1P05556 798 aa18.66■□□□□ 0.58
CLN6-218ENST00000637223 NR2F2P24468 414 aa18.66■□□□□ 0.58
CLN6-218ENST00000637223 PPM1AP35813 382 aa18.66■□□□□ 0.58
CLN6-218ENST00000637223 PPP1R2P41236 205 aa18.66■□□□□ 0.58
CLN6-218ENST00000637223 CASP4P49662 377 aa18.66■□□□□ 0.58
CLN6-218ENST00000637223 GUCY2FP51841 1108 aa18.66■□□□□ 0.58
CLN6-218ENST00000637223 POU5F1Q01860 360 aaKnown RBP18.66■□□□□ 0.58
CLN6-218ENST00000637223 CEP135Q66GS9 1140 aa18.66■□□□□ 0.58
CLN6-218ENST00000637223 ANKRD40Q6AI12 368 aa18.66■□□□□ 0.58
CLN6-218ENST00000637223 CENPPQ6IPU0 288 aa18.66■□□□□ 0.58
CLN6-218ENST00000637223 SLC9A9Q8IVB4 645 aa18.66■□□□□ 0.58
CLN6-218ENST00000637223 NELFBQ8WX92 580 aa18.66■□□□□ 0.58
CLN6-218ENST00000637223 DHTKD1Q96HY7 919 aaPredicted RBP18.66■□□□□ 0.58
CLN6-218ENST00000637223 ASB7Q9H672 318 aa18.66■□□□□ 0.58
CLN6-218ENST00000637223 PDE11AQ9HCR9 933 aa18.66■□□□□ 0.58
CLN6-218ENST00000637223 CCNE1P24864 410 aa18.65■□□□□ 0.58
CLN6-218ENST00000637223 KCNQ1P51787 676 aa18.65■□□□□ 0.58
CLN6-218ENST00000637223 STX17P56962 302 aa18.65■□□□□ 0.58
CLN6-218ENST00000637223 TMEM132DQ14C87 1099 aa18.65■□□□□ 0.58
CLN6-218ENST00000637223 NFIL3Q16649 462 aa18.65■□□□□ 0.58
CLN6-218ENST00000637223 AAK1Q2M2I8 961 aa18.65■□□□□ 0.58
CLN6-218ENST00000637223 RBM43Q6ZSC3 357 aaKnown RBP18.65■□□□□ 0.58
CLN6-218ENST00000637223 EFCAB13Q8IY85 973 aa18.65■□□□□ 0.58
CLN6-218ENST00000637223 EEF2KMTQ96G04 330 aa18.65■□□□□ 0.58
CLN6-218ENST00000637223 TMEM169Q96HH4 297 aa18.65■□□□□ 0.58
CLN6-218ENST00000637223 IGSF21Q96ID5 467 aa18.65■□□□□ 0.58
CLN6-218ENST00000637223 FAM84AQ96KN4 292 aa18.65■□□□□ 0.58
CLN6-218ENST00000637223 MARCH5Q9NX47 278 aa18.65■□□□□ 0.58
CLN6-218ENST00000637223 UBQLN1Q9UMX0 589 aaKnown RBP18.65■□□□□ 0.58
CLN6-218ENST00000637223 LPXNO60711 386 aa18.64■□□□□ 0.57
CLN6-218ENST00000637223 RPL13P26373 211 aaKnown RBP18.64■□□□□ 0.57
CLN6-218ENST00000637223 CLCNKBP51801 687 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms