RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 ANKFY1Q9P2R3 1169 aa20.13■□□□□ 0.81
CLN6-214ENST00000636314 CCDC39Q9UFE4 941 aa20.13■□□□□ 0.81
CLN6-214ENST00000636314 LILRB3O75022 631 aa20.12■□□□□ 0.81
CLN6-214ENST00000636314 TBCAO75347 108 aaKnown RBP20.12■□□□□ 0.81
CLN6-214ENST00000636314 KIF4AO95239 1232 aa20.12■□□□□ 0.81
CLN6-214ENST00000636314 ADH1AP07327 375 aa20.12■□□□□ 0.81
CLN6-214ENST00000636314 PROZP22891 400 aa20.12■□□□□ 0.81
CLN6-214ENST00000636314 NCKAP1LP55160 1127 aa20.12■□□□□ 0.81
CLN6-214ENST00000636314 OSTNP61366 133 aa20.12■□□□□ 0.81
CLN6-214ENST00000636314 DSG1Q02413 1049 aa20.12■□□□□ 0.81
CLN6-214ENST00000636314 USP49Q70CQ1 688 aa20.12■□□□□ 0.81
CLN6-214ENST00000636314 HASPINQ8TF76 798 aa20.12■□□□□ 0.81
CLN6-214ENST00000636314 NKD2Q969F2 451 aaPredicted RBP20.12■□□□□ 0.81
CLN6-214ENST00000636314 CLIC6Q96NY7 704 aa20.12■□□□□ 0.81
CLN6-214ENST00000636314 GPR62Q9BZJ7 368 aa20.12■□□□□ 0.81
CLN6-214ENST00000636314 ZHX3Q9H4I2 956 aa20.12■□□□□ 0.81
CLN6-214ENST00000636314 PARVGQ9HBI0 331 aa20.12■□□□□ 0.81
CLN6-214ENST00000636314 FBXL21Q9UKT6 434 aa20.12■□□□□ 0.81
CLN6-214ENST00000636314 FAM186AA6NE01 2351 aa20.11■□□□□ 0.81
CLN6-214ENST00000636314 K7ENM7 598 aa20.11■□□□□ 0.81
CLN6-214ENST00000636314 ABLIM1O14639 778 aa20.11■□□□□ 0.81
CLN6-214ENST00000636314 TOM1L1O75674 476 aa20.11■□□□□ 0.81
CLN6-214ENST00000636314 CLCN4P51793 760 aa20.11■□□□□ 0.81
CLN6-214ENST00000636314 TDGQ13569 410 aa20.11■□□□□ 0.81
CLN6-214ENST00000636314 NOLC1Q14978 699 aaKnown RBP eCLIP20.11■□□□□ 0.81
CLN6-214ENST00000636314 NAB2Q15742 525 aa20.11■□□□□ 0.81
CLN6-214ENST00000636314 USP41Q3LFD5 358 aa20.11■□□□□ 0.81
CLN6-214ENST00000636314 KIAA0319Q5VV43 1072 aa20.11■□□□□ 0.81
CLN6-214ENST00000636314 ZPBP2Q6X784 338 aa20.11■□□□□ 0.81
CLN6-214ENST00000636314 MYCT1Q8N699 235 aa20.11■□□□□ 0.81
CLN6-214ENST00000636314 BICD1Q96G01 975 aa20.11■□□□□ 0.81
CLN6-214ENST00000636314 B3GALT6Q96L58 329 aa20.11■□□□□ 0.81
CLN6-214ENST00000636314 PPP1R10Q96QC0 940 aaKnown RBP20.11■□□□□ 0.81
CLN6-214ENST00000636314 STK17AQ9UEE5 414 aa20.11■□□□□ 0.81
CLN6-214ENST00000636314 MORC2Q9Y6X9 1032 aaPredicted RBP20.11■□□□□ 0.81
CLN6-214ENST00000636314 RIF1Q5UIP0 2472 aaKnown RBP20.1■□□□□ 0.81
CLN6-214ENST00000636314 TEX28O15482 410 aa20.1■□□□□ 0.81
CLN6-214ENST00000636314 MATR3P43243 847 aaKnown RBP eCLIP20.1■□□□□ 0.81
CLN6-214ENST00000636314 ZNF131P52739 623 aa20.1■□□□□ 0.81
CLN6-214ENST00000636314 FOXK2Q01167 660 aa20.1■□□□□ 0.81
CLN6-214ENST00000636314 SLC39A14Q15043 492 aa20.1■□□□□ 0.81
CLN6-214ENST00000636314 STK38Q15208 465 aa20.1■□□□□ 0.81
CLN6-214ENST00000636314 HAUS6Q7Z4H7 955 aa20.1■□□□□ 0.81
CLN6-214ENST00000636314 KRI1Q8N9T8 703 aaKnown RBP20.1■□□□□ 0.81
CLN6-214ENST00000636314 ACAP3Q96P50 834 aa20.1■□□□□ 0.81
CLN6-214ENST00000636314 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.1■□□□□ 0.81
CLN6-214ENST00000636314 CHST7Q9NS84 486 aa20.1■□□□□ 0.81
CLN6-214ENST00000636314 DUSP12Q9UNI6 340 aa20.1■□□□□ 0.81
CLN6-214ENST00000636314 PDCD11Q14690 1871 aaKnown RBP20.09■□□□□ 0.81
CLN6-214ENST00000636314 PI15O43692 258 aa20.09■□□□□ 0.81
CLN6-214ENST00000636314 AOC1P19801 751 aa20.09■□□□□ 0.81
CLN6-214ENST00000636314 SCP2P22307 547 aa20.09■□□□□ 0.81
CLN6-214ENST00000636314 DDIT3P35638 169 aa20.09■□□□□ 0.81
CLN6-214ENST00000636314 NASPP49321 788 aaPredicted RBP20.09■□□□□ 0.81
CLN6-214ENST00000636314 CREMQ03060 361 aa20.09■□□□□ 0.81
CLN6-214ENST00000636314 RRAGBQ5VZM2 374 aa20.09■□□□□ 0.81
CLN6-214ENST00000636314 ELMSAN1Q6PJG2 1045 aa20.09■□□□□ 0.81
CLN6-214ENST00000636314 GPR65Q8IYL9 337 aa20.09■□□□□ 0.81
CLN6-214ENST00000636314 RIN2Q8WYP3 895 aaPredicted RBP20.09■□□□□ 0.81
CLN6-214ENST00000636314 ZBTB45Q96K62 511 aaPredicted RBP20.09■□□□□ 0.81
CLN6-214ENST00000636314 UROC1Q96N76 676 aa20.09■□□□□ 0.81
CLN6-214ENST00000636314 ZNF396Q96N95 335 aaPredicted RBP20.09■□□□□ 0.81
CLN6-214ENST00000636314 KCNK12Q9HB15 430 aa20.09■□□□□ 0.81
CLN6-214ENST00000636314 RXFP1Q9HBX9 757 aa20.09■□□□□ 0.81
CLN6-214ENST00000636314 MTCL1Q9Y4B5 1905 aaKnown RBP20.09■□□□□ 0.81
CLN6-214ENST00000636314 SMIM28A0A1B0GU29 152 aa20.08■□□□□ 0.81
CLN6-214ENST00000636314 CLDN3O15551 220 aa20.08■□□□□ 0.81
CLN6-214ENST00000636314 TRAK2O60296 914 aa20.08■□□□□ 0.81
CLN6-214ENST00000636314 GLUD1P00367 558 aa20.08■□□□□ 0.81
CLN6-214ENST00000636314 PDIA4P13667 645 aaKnown RBP20.08■□□□□ 0.81
CLN6-214ENST00000636314 NPR3P17342 541 aa20.08■□□□□ 0.81
CLN6-214ENST00000636314 LIG4P49917 911 aa20.08■□□□□ 0.81
CLN6-214ENST00000636314 ELAVL2Q12926 359 aaKnown RBP20.08■□□□□ 0.81
CLN6-214ENST00000636314 FAM171A1Q5VUB5 890 aa20.08■□□□□ 0.81
CLN6-214ENST00000636314 FOXD4L5Q5VV16 416 aaPredicted RBP20.08■□□□□ 0.81
CLN6-214ENST00000636314 CCDC105Q8IYK2 499 aa20.08■□□□□ 0.81
CLN6-214ENST00000636314 ADSSL1Q8N142 457 aa20.08■□□□□ 0.81
CLN6-214ENST00000636314 SIX5Q8N196 739 aa20.08■□□□□ 0.81
CLN6-214ENST00000636314 FOXD4L4Q8WXT5 416 aaPredicted RBP20.08■□□□□ 0.81
CLN6-214ENST00000636314 KCNN1Q92952 543 aa20.08■□□□□ 0.81
CLN6-214ENST00000636314 RTP3Q9BQQ7 232 aa20.08■□□□□ 0.81
CLN6-214ENST00000636314 GOLGA2P5Q9HBQ8 144 aa20.08■□□□□ 0.81
CLN6-214ENST00000636314 MAN1C1Q9NR34 630 aa20.08■□□□□ 0.81
CLN6-214ENST00000636314 SLC38A7Q9NVC3 462 aa20.08■□□□□ 0.81
CLN6-214ENST00000636314 DPP7Q9UHL4 492 aa20.08■□□□□ 0.81
CLN6-214ENST00000636314 VWA8A3KMH1 1905 aa20.08■□□□□ 0.8
CLN6-214ENST00000636314 TMEM189-UBE2V1I3L0A0 370 aa20.07■□□□□ 0.8
CLN6-214ENST00000636314 STK25O00506 426 aa20.07■□□□□ 0.8
CLN6-214ENST00000636314 HNRNPDLO14979 420 aaKnown RBP20.07■□□□□ 0.8
CLN6-214ENST00000636314 B3GAT3O94766 335 aa20.07■□□□□ 0.8
CLN6-214ENST00000636314 CLCNKBP51801 687 aa20.07■□□□□ 0.8
CLN6-214ENST00000636314 MCL1Q07820 350 aa20.07■□□□□ 0.8
CLN6-214ENST00000636314 ANGPT1Q15389 498 aa20.07■□□□□ 0.8
CLN6-214ENST00000636314 XKR4Q5GH76 650 aa20.07■□□□□ 0.8
CLN6-214ENST00000636314 RTP2Q5QGT7 225 aa20.07■□□□□ 0.8
CLN6-214ENST00000636314 C15orf39Q6ZRI6 1047 aa20.07■□□□□ 0.8
CLN6-214ENST00000636314 CCDC73Q6ZRK6 1079 aa20.07■□□□□ 0.8
CLN6-214ENST00000636314 CEP57Q86XR8 500 aa20.07■□□□□ 0.8
CLN6-214ENST00000636314 GLYCTKQ8IVS8 523 aa20.07■□□□□ 0.8
CLN6-214ENST00000636314 TTPALQ9BTX7 342 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms