RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 EYA4O95677 639 aa12.3□□□□□ -0.44
COL11A1-211ENST00000635193 HLA-DPA1P20036 260 aa12.3□□□□□ -0.44
COL11A1-211ENST00000635193 NMT1P30419 496 aaKnown RBP12.3□□□□□ -0.44
COL11A1-211ENST00000635193 RCSD1Q6JBY9 416 aa12.3□□□□□ -0.44
COL11A1-211ENST00000635193 NSL1Q96IY1 281 aa12.3□□□□□ -0.44
COL11A1-211ENST00000635193 RMDN2Q96LZ7 410 aa12.3□□□□□ -0.44
COL11A1-211ENST00000635193 SPDYE2BA6NHP3 402 aa12.3□□□□□ -0.44
COL11A1-211ENST00000635193 MYMKA6NI61 221 aa12.3□□□□□ -0.44
COL11A1-211ENST00000635193 ATP6V1G2O95670 118 aa12.3□□□□□ -0.44
COL11A1-211ENST00000635193 SPDYE6P0CI01 402 aa12.3□□□□□ -0.44
COL11A1-211ENST00000635193 QARSP47897 775 aaKnown RBP12.3□□□□□ -0.44
COL11A1-211ENST00000635193 SPOUT1Q5T280 376 aaKnown RBP12.3□□□□□ -0.44
COL11A1-211ENST00000635193 RWDD4Q6NW29 188 aaKnown RBP12.3□□□□□ -0.44
COL11A1-211ENST00000635193 CDKL3Q8IVW4 592 aaPredicted RBP12.3□□□□□ -0.44
COL11A1-211ENST00000635193 NLGN1Q8N2Q7 840 aa12.3□□□□□ -0.44
COL11A1-211ENST00000635193 ALKBH8Q96BT7 664 aaKnown RBP12.3□□□□□ -0.44
COL11A1-211ENST00000635193 CLMNQ96JQ2 1002 aa12.3□□□□□ -0.44
COL11A1-211ENST00000635193 COA1Q9GZY4 146 aa12.3□□□□□ -0.44
COL11A1-211ENST00000635193 ETAA1Q9NY74 926 aa12.3□□□□□ -0.44
COL11A1-211ENST00000635193 PXDNLA1KZ92 1463 aa12.3□□□□□ -0.44
COL11A1-211ENST00000635193 QRICH2Q9H0J4 1663 aa12.3□□□□□ -0.44
COL11A1-211ENST00000635193 F5H423 210 aaPredicted RBP12.3□□□□□ -0.44
COL11A1-211ENST00000635193 M0QYV0 167 aa12.3□□□□□ -0.44
COL11A1-211ENST00000635193 CASKIN2Q8WXE0 1202 aa12.3□□□□□ -0.44
COL11A1-211ENST00000635193 BEGAINQ9BUH8 593 aa12.3□□□□□ -0.44
COL11A1-211ENST00000635193 WDR47O94967 919 aa12.3□□□□□ -0.44
COL11A1-211ENST00000635193 ZCCHC18P0CG32 403 aa12.3□□□□□ -0.44
COL11A1-211ENST00000635193 CLEC4GQ6UXB4 293 aa12.3□□□□□ -0.44
COL11A1-211ENST00000635193 EEPD1Q7L9B9 569 aa12.3□□□□□ -0.44
COL11A1-211ENST00000635193 NEU2Q9Y3R4 380 aa12.3□□□□□ -0.44
COL11A1-211ENST00000635193 OSBPP22059 807 aa12.29□□□□□ -0.44
COL11A1-211ENST00000635193 TARSP26639 723 aaKnown RBP12.29□□□□□ -0.44
COL11A1-211ENST00000635193 TAP1Q03518 808 aa12.29□□□□□ -0.44
COL11A1-211ENST00000635193 GRIN1Q05586 938 aa12.29□□□□□ -0.44
COL11A1-211ENST00000635193 POU5F1BQ06416 359 aa12.29□□□□□ -0.44
COL11A1-211ENST00000635193 FOXD4Q12950 439 aaPredicted RBP12.29□□□□□ -0.44
COL11A1-211ENST00000635193 SLC29A2Q14542 456 aa12.29□□□□□ -0.44
COL11A1-211ENST00000635193 BARGINQ6ZT62 677 aa12.29□□□□□ -0.44
COL11A1-211ENST00000635193 MIGA2Q7L4E1 593 aa12.29□□□□□ -0.44
COL11A1-211ENST00000635193 DDI1Q8WTU0 396 aa12.29□□□□□ -0.44
COL11A1-211ENST00000635193 ACAP3Q96P50 834 aa12.29□□□□□ -0.44
COL11A1-211ENST00000635193 ERGIC2Q96RQ1 377 aa12.29□□□□□ -0.44
COL11A1-211ENST00000635193 KDM4CQ9H3R0 1056 aa12.29□□□□□ -0.44
COL11A1-211ENST00000635193 BLOC1S6Q9UL45 172 aa12.29□□□□□ -0.44
COL11A1-211ENST00000635193 AKAP10O43572 662 aa12.29□□□□□ -0.44
COL11A1-211ENST00000635193 FMO5P49326 533 aa12.29□□□□□ -0.44
COL11A1-211ENST00000635193 CAPRIN1Q14444 709 aaKnown RBP12.29□□□□□ -0.44
COL11A1-211ENST00000635193 C1orf228Q6PIY5 440 aa12.29□□□□□ -0.44
COL11A1-211ENST00000635193 RCOR2Q8IZ40 523 aa12.29□□□□□ -0.44
COL11A1-211ENST00000635193 GPD1LQ8N335 351 aa12.29□□□□□ -0.44
COL11A1-211ENST00000635193 CDC26Q8NHZ8 85 aa12.29□□□□□ -0.44
COL11A1-211ENST00000635193 AGR3Q8TD06 166 aa12.29□□□□□ -0.44
COL11A1-211ENST00000635193 KLHL11Q9NVR0 708 aa12.29□□□□□ -0.44
COL11A1-211ENST00000635193 CROCC2H7BZ55 1655 aa12.29□□□□□ -0.44
COL11A1-211ENST00000635193 M0R3G1 203 aa12.29□□□□□ -0.44
COL11A1-211ENST00000635193 PIK3R2O00459 728 aa12.29□□□□□ -0.44
COL11A1-211ENST00000635193 WBP4O75554 376 aaKnown RBP12.29□□□□□ -0.44
COL11A1-211ENST00000635193 KCNQ4P56696 695 aa12.29□□□□□ -0.44
COL11A1-211ENST00000635193 KRT76Q01546 638 aa12.29□□□□□ -0.44
COL11A1-211ENST00000635193 FAM196AQ6ZSG2 479 aa12.29□□□□□ -0.44
COL11A1-211ENST00000635193 TTC8Q8TAM2 541 aa12.29□□□□□ -0.44
COL11A1-211ENST00000635193 PRPF18Q99633 342 aaKnown RBP12.29□□□□□ -0.44
COL11A1-211ENST00000635193 COG4Q9H9E3 785 aa12.29□□□□□ -0.44
COL11A1-211ENST00000635193 PPCSQ9HAB8 311 aa12.29□□□□□ -0.44
COL11A1-211ENST00000635193 UTP6Q9NYH9 597 aaKnown RBP12.29□□□□□ -0.44
COL11A1-211ENST00000635193 TMEM253P0C7T8 217 aa12.29□□□□□ -0.44
COL11A1-211ENST00000635193 GPC3P51654 580 aa12.29□□□□□ -0.44
COL11A1-211ENST00000635193 EIF3EP60228 445 aaKnown RBP12.29□□□□□ -0.44
COL11A1-211ENST00000635193 ZC3H12BQ5HYM0 836 aaKnown RBP12.29□□□□□ -0.44
COL11A1-211ENST00000635193 NEDD1Q8NHV4 660 aa12.29□□□□□ -0.44
COL11A1-211ENST00000635193 LZICQ8WZA0 190 aa12.29□□□□□ -0.44
COL11A1-211ENST00000635193 SYN2Q92777 582 aaPredicted RBP12.29□□□□□ -0.44
COL11A1-211ENST00000635193 ANKRD27Q96NW4 1050 aa12.29□□□□□ -0.44
COL11A1-211ENST00000635193 FSD1LQ9BXM9 530 aa12.29□□□□□ -0.44
COL11A1-211ENST00000635193 CNGB3Q9NQW8 809 aa12.29□□□□□ -0.44
COL11A1-211ENST00000635193 SRP68Q9UHB9 627 aaKnown RBP12.29□□□□□ -0.44
COL11A1-211ENST00000635193 APBA3O96018 575 aa12.28□□□□□ -0.44
COL11A1-211ENST00000635193 SLC9A1P19634 815 aa12.28□□□□□ -0.44
COL11A1-211ENST00000635193 MAP3K10Q02779 954 aa12.28□□□□□ -0.44
COL11A1-211ENST00000635193 SMAD1Q15797 465 aaKnown RBP12.28□□□□□ -0.44
COL11A1-211ENST00000635193 MAPK6Q16659 721 aa12.28□□□□□ -0.44
COL11A1-211ENST00000635193 SLC30A5Q8TAD4 765 aa12.28□□□□□ -0.44
COL11A1-211ENST00000635193 DNAJC7Q99615 494 aa12.28□□□□□ -0.44
COL11A1-211ENST00000635193 BFARQ9NZS9 450 aa12.28□□□□□ -0.44
COL11A1-211ENST00000635193 KLHL2O95198 593 aa12.28□□□□□ -0.44
COL11A1-211ENST00000635193 SSTR3P32745 418 aaPredicted RBP12.28□□□□□ -0.44
COL11A1-211ENST00000635193 COPB2P35606 906 aa12.28□□□□□ -0.44
COL11A1-211ENST00000635193 HSPA13P48723 471 aa12.28□□□□□ -0.44
COL11A1-211ENST00000635193 CDH6P55285 790 aa12.28□□□□□ -0.44
COL11A1-211ENST00000635193 EDRF1Q3B7T1 1238 aa12.28□□□□□ -0.44
COL11A1-211ENST00000635193 C16orf89Q6UX73 402 aa12.28□□□□□ -0.44
COL11A1-211ENST00000635193 HAUS6Q7Z4H7 955 aa12.28□□□□□ -0.44
COL11A1-211ENST00000635193 SULF1Q8IWU6 871 aa12.28□□□□□ -0.44
COL11A1-211ENST00000635193 CYGBQ8WWM9 190 aa12.28□□□□□ -0.44
COL11A1-211ENST00000635193 RMDN3Q96TC7 470 aa12.28□□□□□ -0.44
COL11A1-211ENST00000635193 SENP2Q9HC62 589 aa12.28□□□□□ -0.44
COL11A1-211ENST00000635193 TMEM94Q12767 1356 aa12.28□□□□□ -0.44
COL11A1-211ENST00000635193 VCAM1P19320 739 aa12.28□□□□□ -0.44
COL11A1-211ENST00000635193 CACNB3P54284 484 aa12.28□□□□□ -0.44
COL11A1-211ENST00000635193 RNF139Q8WU17 664 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms