RNA–Protein interactions for RNA: ENST00000630813.1

CHD2-220, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2

Gene CHD2, Length 452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-220ENST00000630813 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.77□□□□□ -1.65
CHD2-220ENST00000630813 TIPINQ9BVW5 301 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 C1QTNF2Q9BXJ5 285 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 NIFKQ9BYG3 293 aaKnown RBP4.77□□□□□ -1.65
CHD2-220ENST00000630813 SPATC1LQ9H0A9 340 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 POLR3FQ9H1D9 316 aaPredicted RBP4.77□□□□□ -1.65
CHD2-220ENST00000630813 ASCC2Q9H1I8 757 aaPredicted RBP4.77□□□□□ -1.65
CHD2-220ENST00000630813 DHX33Q9H6R0 707 aaKnown RBP4.77□□□□□ -1.65
CHD2-220ENST00000630813 ELP3Q9H9T3 547 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 PDE11AQ9HCR9 933 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 JPH1Q9HDC5 661 aaPredicted RBP4.77□□□□□ -1.65
CHD2-220ENST00000630813 ARFGAP3Q9NP61 516 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 POLMQ9NP87 494 aaPredicted RBP4.77□□□□□ -1.65
CHD2-220ENST00000630813 UBE2TQ9NPD8 197 aaPredicted RBP4.77□□□□□ -1.65
CHD2-220ENST00000630813 OSGEPQ9NPF4 335 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 CYP26B1Q9NR63 512 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 ADARB2Q9NS39 739 aaKnown RBP4.77□□□□□ -1.65
CHD2-220ENST00000630813 CUEDC1Q9NWM3 386 aaPredicted RBP4.77□□□□□ -1.65
CHD2-220ENST00000630813 PGPEP1Q9NXJ5 209 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 HOXC10Q9NYD6 342 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 LARSQ9P2J5 1176 aaKnown RBP4.77□□□□□ -1.65
CHD2-220ENST00000630813 SLC9A2Q9UBY0 812 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 CHORDC1Q9UHD1 332 aaPredicted RBP4.77□□□□□ -1.65
CHD2-220ENST00000630813 FAM153AQ9UHL3 310 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 PNMA2Q9UL42 364 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 HPCAL4Q9UM19 191 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 KCNH4Q9UQ05 1017 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 BZW2Q9Y6E2 419 aaKnown RBP4.77□□□□□ -1.65
CHD2-220ENST00000630813 STYXL1Q9Y6J8 313 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 UTRNP46939 3433 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 UMODL1Q5DID0 1318 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 ADGRA2Q96PE1 1338 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 CNTNAP2Q9UHC6 1331 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 A0A0A6YYK5 440 aaPredicted RBP4.76□□□□□ -1.65
CHD2-220ENST00000630813 MOXD2PA6NHM9 499 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 CCDC169A6NNP5 214 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 TMCO5BA8MYB1 307 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 POLR3GO15318 223 aaPredicted RBP4.76□□□□□ -1.65
CHD2-220ENST00000630813 P4HA2O15460 535 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 CYP26A1O43174 497 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 LGR5O75473 907 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 EIF3JO75822 258 aaKnown RBP4.76□□□□□ -1.65
CHD2-220ENST00000630813 IPO7O95373 1038 aaKnown RBP4.76□□□□□ -1.65
CHD2-220ENST00000630813 VNN1O95497 513 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 F12P00748 615 aaPredicted RBP4.76□□□□□ -1.65
CHD2-220ENST00000630813 PIGRP01833 764 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 C4BPAP04003 597 aaKnown RBP4.76□□□□□ -1.65
CHD2-220ENST00000630813 PGK2P07205 417 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 PSAPP07602 524 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 MMEP08473 750 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 H2AFZP0C0S5 128 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 TMEM253P0C7T8 217 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 TCP1P17987 556 aaKnown RBP4.76□□□□□ -1.65
CHD2-220ENST00000630813 ACO1P21399 889 aaKnown RBP4.76□□□□□ -1.65
CHD2-220ENST00000630813 MARCKSL1P49006 195 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 DNA2P51530 1060 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 GPC3P51654 580 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 NLRP11P59045 1033 aaKnown RBP4.76□□□□□ -1.65
CHD2-220ENST00000630813 SNRPFP62306 86 aaKnown RBP4.76□□□□□ -1.65
CHD2-220ENST00000630813 RELBQ01201 579 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 FMO1Q01740 532 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 GABPB1Q06547 395 aaPredicted RBP4.76□□□□□ -1.65
CHD2-220ENST00000630813 CKAP4Q07065 602 aaKnown RBP4.76□□□□□ -1.65
CHD2-220ENST00000630813 EMC2Q15006 297 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 TCEAL1Q15170 157 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 SNRNP35Q16560 246 aaKnown RBP4.76□□□□□ -1.65
CHD2-220ENST00000630813 LY6KQ17RY6 165 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 MTERF2Q49AM1 385 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 C10orf76Q5T2E6 689 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 LDLRAD1Q5T700 205 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 C9orf131Q5VYM1 1079 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 LMBRD2Q68DH5 695 aaPredicted RBP4.76□□□□□ -1.65
CHD2-220ENST00000630813 AADACL2Q6P093 401 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 LLGL2Q6P1M3 1020 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 CCDC62Q6P9F0 684 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 H2AFVQ71UI9 128 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 INTS8Q75QN2 995 aaKnown RBP4.76□□□□□ -1.65
CHD2-220ENST00000630813 SLC47A2Q86VL8 602 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 RPUSD2Q8IZ73 545 aaKnown RBP4.76□□□□□ -1.65
CHD2-220ENST00000630813 RASGEF1CQ8N431 466 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 UBR7Q8N806 425 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 CHST13Q8NET6 341 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 SLC35G2Q8TBE7 412 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 EPS8L1Q8TE68 723 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 UBE2Q2Q8WVN8 375 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 PSPC1Q8WXF1 523 aaKnown RBP4.76□□□□□ -1.65
CHD2-220ENST00000630813 RIN2Q8WYP3 895 aaPredicted RBP4.76□□□□□ -1.65
CHD2-220ENST00000630813 PIK3R5Q8WYR1 880 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 SHC3Q92529 594 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 ALG3Q92685 438 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 KRT35Q92764 455 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 COPS5Q92905 334 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 ACDQ96AP0 544 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 CCDC127Q96BQ5 260 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 HVCN1Q96D96 273 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 CDCA5Q96FF9 252 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 HES6Q96HZ4 224 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 IWS1Q96ST2 819 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 SYT17Q9BSW7 474 aa4.76□□□□□ -1.65
CHD2-220ENST00000630813 MAF1Q9H063 256 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms