RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 EXOC3L4Q17RC7 722 aa13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 CCDC122Q5T0U0 273 aa13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 NAPGQ99747 312 aaPredicted RBP13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 SYNCQ9H7C4 482 aa13.42□□□□□ -0.26
SYNGAP1-207ENST00000628646 TISP43B9A030 160 aa13.41□□□□□ -0.26
SYNGAP1-207ENST00000628646 OGTO15294 1046 aa13.41□□□□□ -0.26
SYNGAP1-207ENST00000628646 B4GALT5O43286 388 aa13.41□□□□□ -0.26
SYNGAP1-207ENST00000628646 ADAMTS4O75173 837 aa13.41□□□□□ -0.26
SYNGAP1-207ENST00000628646 AKAP5P24588 427 aa13.41□□□□□ -0.26
SYNGAP1-207ENST00000628646 ARPP19P56211 112 aa13.41□□□□□ -0.26
SYNGAP1-207ENST00000628646 BFSP1Q12934 665 aa13.41□□□□□ -0.26
SYNGAP1-207ENST00000628646 SCARA5Q6ZMJ2 495 aa13.41□□□□□ -0.26
SYNGAP1-207ENST00000628646 OTOP2Q7RTS6 562 aa13.41□□□□□ -0.26
SYNGAP1-207ENST00000628646 KAT2BQ92831 832 aa13.41□□□□□ -0.26
SYNGAP1-207ENST00000628646 MAP2K7O14733 419 aa13.41□□□□□ -0.26
SYNGAP1-207ENST00000628646 MYO1EQ12965 1108 aa13.41□□□□□ -0.26
SYNGAP1-207ENST00000628646 DCAF4L1Q3SXM0 396 aa13.41□□□□□ -0.26
SYNGAP1-207ENST00000628646 ZNF618Q5T7W0 954 aa13.41□□□□□ -0.26
SYNGAP1-207ENST00000628646 CEP57Q86XR8 500 aa13.41□□□□□ -0.26
SYNGAP1-207ENST00000628646 TMEM161BQ8NDZ6 487 aa13.41□□□□□ -0.26
SYNGAP1-207ENST00000628646 ZNF333Q96JL9 665 aa13.41□□□□□ -0.26
SYNGAP1-207ENST00000628646 CEP63Q96MT8 703 aa13.41□□□□□ -0.26
SYNGAP1-207ENST00000628646 RNF19AQ9NV58 838 aa13.41□□□□□ -0.26
SYNGAP1-207ENST00000628646 PRG3Q9Y2Y8 225 aaPredicted RBP13.41□□□□□ -0.26
SYNGAP1-207ENST00000628646 HES2Q9Y543 173 aa13.41□□□□□ -0.26
SYNGAP1-207ENST00000628646 FAM170AA1A519 330 aa13.41□□□□□ -0.26
SYNGAP1-207ENST00000628646 DARSP14868 501 aaKnown RBP13.41□□□□□ -0.26
SYNGAP1-207ENST00000628646 PDE11AQ9HCR9 933 aa13.41□□□□□ -0.26
SYNGAP1-207ENST00000628646 SNTG2Q9NY99 539 aa13.41□□□□□ -0.26
SYNGAP1-207ENST00000628646 PADI3Q9ULW8 664 aa13.41□□□□□ -0.26
SYNGAP1-207ENST00000628646 GUCA1BQ9UMX6 200 aa13.41□□□□□ -0.26
SYNGAP1-207ENST00000628646 ATP8B1O43520 1251 aa13.4□□□□□ -0.26
SYNGAP1-207ENST00000628646 CLTAP09496 248 aa13.4□□□□□ -0.26
SYNGAP1-207ENST00000628646 SKIP12755 728 aa13.4□□□□□ -0.26
SYNGAP1-207ENST00000628646 ODF2Q5BJF6 829 aa13.4□□□□□ -0.26
SYNGAP1-207ENST00000628646 SLC27A1Q6PCB7 646 aa13.4□□□□□ -0.26
SYNGAP1-207ENST00000628646 NT5C1BQ96P26 610 aa13.4□□□□□ -0.26
SYNGAP1-207ENST00000628646 OTOFQ9HC10 1997 aa13.4□□□□□ -0.26
SYNGAP1-207ENST00000628646 B4GALT4O60513 344 aa13.4□□□□□ -0.26
SYNGAP1-207ENST00000628646 LCA5LO95447 670 aa13.4□□□□□ -0.26
SYNGAP1-207ENST00000628646 ACRP10323 421 aa13.4□□□□□ -0.26
SYNGAP1-207ENST00000628646 ZBED6P86452 979 aa13.4□□□□□ -0.26
SYNGAP1-207ENST00000628646 KYAT1Q16773 422 aa13.4□□□□□ -0.26
SYNGAP1-207ENST00000628646 DUOXA2Q1HG44 320 aa13.4□□□□□ -0.26
SYNGAP1-207ENST00000628646 CBWD2Q8IUF1 395 aa13.4□□□□□ -0.26
SYNGAP1-207ENST00000628646 UBE4BO95155 1302 aa13.4□□□□□ -0.26
SYNGAP1-207ENST00000628646 SCP2P22307 547 aa13.4□□□□□ -0.26
SYNGAP1-207ENST00000628646 SLC39A5Q6ZMH5 540 aa13.4□□□□□ -0.26
SYNGAP1-207ENST00000628646 ZC3H3Q8IXZ2 948 aaKnown RBP13.4□□□□□ -0.26
SYNGAP1-207ENST00000628646 HNRNPLLQ8WVV9 542 aaKnown RBP13.4□□□□□ -0.26
SYNGAP1-207ENST00000628646 BAP1Q92560 729 aa13.4□□□□□ -0.26
SYNGAP1-207ENST00000628646 NOC2LQ9Y3T9 749 aaKnown RBP13.4□□□□□ -0.26
SYNGAP1-207ENST00000628646 KIAA0391O15091 583 aaKnown RBP13.39□□□□□ -0.27
SYNGAP1-207ENST00000628646 PLEKP08567 350 aaPredicted RBP13.39□□□□□ -0.27
SYNGAP1-207ENST00000628646 OR1G1P47890 313 aa13.39□□□□□ -0.27
SYNGAP1-207ENST00000628646 TMEM132DQ14C87 1099 aa13.39□□□□□ -0.27
SYNGAP1-207ENST00000628646 BEND6Q5SZJ8 279 aaPredicted RBP13.39□□□□□ -0.27
SYNGAP1-207ENST00000628646 PAPD7Q5XG87 772 aaKnown RBP13.39□□□□□ -0.27
SYNGAP1-207ENST00000628646 DBF4BQ8NFT6 615 aa13.39□□□□□ -0.27
SYNGAP1-207ENST00000628646 SEZ6LQ9BYH1 1024 aa13.39□□□□□ -0.27
SYNGAP1-207ENST00000628646 KATNBL1Q9H079 304 aa13.39□□□□□ -0.27
SYNGAP1-207ENST00000628646 DUSP10Q9Y6W6 482 aa13.39□□□□□ -0.27
SYNGAP1-207ENST00000628646 FRMD3A2A2Y4 597 aa13.39□□□□□ -0.27
SYNGAP1-207ENST00000628646 CD58P19256 250 aa13.39□□□□□ -0.27
SYNGAP1-207ENST00000628646 ARL2P36404 184 aa13.39□□□□□ -0.27
SYNGAP1-207ENST00000628646 GJA8P48165 433 aa13.39□□□□□ -0.27
SYNGAP1-207ENST00000628646 PTPN11Q06124 597 aaPredicted RBP13.39□□□□□ -0.27
SYNGAP1-207ENST00000628646 ASTE1Q2TB18 679 aaPredicted RBP13.39□□□□□ -0.27
SYNGAP1-207ENST00000628646 CCDC170Q8IYT3 715 aa13.39□□□□□ -0.27
SYNGAP1-207ENST00000628646 NOA1Q8NC60 698 aaKnown RBP13.39□□□□□ -0.27
SYNGAP1-207ENST00000628646 NHEJ1Q9H9Q4 299 aaPredicted RBP13.39□□□□□ -0.27
SYNGAP1-207ENST00000628646 GCNT4Q9P109 453 aa13.39□□□□□ -0.27
SYNGAP1-207ENST00000628646 ARHGAP20Q9P2F6 1191 aa13.39□□□□□ -0.27
SYNGAP1-207ENST00000628646 EIF3CLB5ME19 914 aaKnown RBP13.39□□□□□ -0.27
SYNGAP1-207ENST00000628646 EXTL3O43909 919 aa13.39□□□□□ -0.27
SYNGAP1-207ENST00000628646 KCNMA1Q12791 1236 aa13.39□□□□□ -0.27
SYNGAP1-207ENST00000628646 DPY19L2P1Q6NXN4 242 aa13.39□□□□□ -0.27
SYNGAP1-207ENST00000628646 JAKMIP2Q96AA8 810 aa13.39□□□□□ -0.27
SYNGAP1-207ENST00000628646 EIF3CQ99613 913 aaKnown RBP13.39□□□□□ -0.27
SYNGAP1-207ENST00000628646 NDST4Q9H3R1 872 aa13.39□□□□□ -0.27
SYNGAP1-207ENST00000628646 PLAGL2Q9UPG8 496 aa13.39□□□□□ -0.27
SYNGAP1-207ENST00000628646 POMCP01189 267 aa13.39□□□□□ -0.27
SYNGAP1-207ENST00000628646 CXCL8P10145 99 aa13.39□□□□□ -0.27
SYNGAP1-207ENST00000628646 KCNH2Q12809 1159 aa13.39□□□□□ -0.27
SYNGAP1-207ENST00000628646 METTL23Q86XA0 190 aa13.39□□□□□ -0.27
SYNGAP1-207ENST00000628646 CCDC151A5D8V7 595 aa13.38□□□□□ -0.27
SYNGAP1-207ENST00000628646 ANKRD63C9JTQ0 380 aa13.38□□□□□ -0.27
SYNGAP1-207ENST00000628646 KIF4AO95239 1232 aa13.38□□□□□ -0.27
SYNGAP1-207ENST00000628646 MAPTP10636 758 aaKnown RBP13.38□□□□□ -0.27
SYNGAP1-207ENST00000628646 ARF4P18085 180 aaPredicted RBP13.38□□□□□ -0.27
SYNGAP1-207ENST00000628646 CASP4P49662 377 aa13.38□□□□□ -0.27
SYNGAP1-207ENST00000628646 EDRF1Q3B7T1 1238 aa13.38□□□□□ -0.27
SYNGAP1-207ENST00000628646 ZNF667Q5HYK9 610 aa13.38□□□□□ -0.27
SYNGAP1-207ENST00000628646 EEF1DP3Q658K8 133 aa13.38□□□□□ -0.27
SYNGAP1-207ENST00000628646 ZPBP2Q6X784 338 aa13.38□□□□□ -0.27
SYNGAP1-207ENST00000628646 MAP4K3Q8IVH8 894 aa13.38□□□□□ -0.27
SYNGAP1-207ENST00000628646 MYO6Q9UM54 1294 aa13.38□□□□□ -0.27
SYNGAP1-207ENST00000628646 AGAP1Q9UPQ3 857 aa13.38□□□□□ -0.27
SYNGAP1-207ENST00000628646 TBKBP1A7MCY6 615 aa13.38□□□□□ -0.27
SYNGAP1-207ENST00000628646 ZC3H11AO75152 810 aaKnown RBP eCLIP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms