RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 CEP170P1Q96L14 293 aa12.03□□□□□ -0.48
VARS2-213ENST00000625423 FBXL18Q96ME1 805 aa12.03□□□□□ -0.48
VARS2-213ENST00000625423 FAM213AQ9BRX8 229 aa12.03□□□□□ -0.48
VARS2-213ENST00000625423 PXMP2Q9NR77 195 aa12.03□□□□□ -0.48
VARS2-213ENST00000625423 WHRNQ9P202 907 aa12.03□□□□□ -0.48
VARS2-213ENST00000625423 PGAP2Q9UHJ9 254 aa12.03□□□□□ -0.48
VARS2-213ENST00000625423 HNRNPDLO14979 420 aaKnown RBP12.02□□□□□ -0.48
VARS2-213ENST00000625423 UNGP13051 313 aaPredicted RBP12.02□□□□□ -0.48
VARS2-213ENST00000625423 IBSPP21815 317 aaPredicted RBP12.02□□□□□ -0.48
VARS2-213ENST00000625423 SFNP31947 248 aa12.02□□□□□ -0.48
VARS2-213ENST00000625423 KRT76Q01546 638 aa12.02□□□□□ -0.48
VARS2-213ENST00000625423 LRRC14Q15048 493 aa12.02□□□□□ -0.48
VARS2-213ENST00000625423 ARHGEF16Q5VV41 709 aa12.02□□□□□ -0.48
VARS2-213ENST00000625423 FKBP1CQ5VVH2 108 aa12.02□□□□□ -0.48
VARS2-213ENST00000625423 MFSD5Q6N075 450 aa12.02□□□□□ -0.48
VARS2-213ENST00000625423 CYB5D1Q6P9G0 228 aa12.02□□□□□ -0.48
VARS2-213ENST00000625423 FAM83AQ86UY5 434 aa12.02□□□□□ -0.48
VARS2-213ENST00000625423 MGARPQ8TDB4 240 aa12.02□□□□□ -0.48
VARS2-213ENST00000625423 P3H4Q92791 437 aa12.02□□□□□ -0.48
VARS2-213ENST00000625423 ROPN1BQ9BZX4 212 aaPredicted RBP12.02□□□□□ -0.48
VARS2-213ENST00000625423 ROPN1Q9HAT0 212 aaPredicted RBP12.02□□□□□ -0.48
VARS2-213ENST00000625423 SAMD15Q9P1V8 674 aa12.02□□□□□ -0.48
VARS2-213ENST00000625423 CREB1P16220 341 aa12.02□□□□□ -0.49
VARS2-213ENST00000625423 GTF2H1P32780 548 aa12.02□□□□□ -0.49
VARS2-213ENST00000625423 RHBDF2Q6PJF5 856 aa12.02□□□□□ -0.49
VARS2-213ENST00000625423 GPD1LQ8N335 351 aa12.02□□□□□ -0.49
VARS2-213ENST00000625423 IPO4Q8TEX9 1081 aaKnown RBP12.02□□□□□ -0.49
VARS2-213ENST00000625423 SLCO2A1Q92959 643 aa12.02□□□□□ -0.49
VARS2-213ENST00000625423 CCDC134Q9H6E4 229 aa12.02□□□□□ -0.49
VARS2-213ENST00000625423 GABBR1Q9UBS5 961 aa12.02□□□□□ -0.49
VARS2-213ENST00000625423 FOXO6A8MYZ6 492 aa12.02□□□□□ -0.49
VARS2-213ENST00000625423 ZNF862O60290 1169 aa12.02□□□□□ -0.49
VARS2-213ENST00000625423 GHRP10912 638 aa12.02□□□□□ -0.49
VARS2-213ENST00000625423 ITIH2P19823 946 aa12.02□□□□□ -0.49
VARS2-213ENST00000625423 IVDP26440 423 aa12.02□□□□□ -0.49
VARS2-213ENST00000625423 VPS41P49754 854 aa12.02□□□□□ -0.49
VARS2-213ENST00000625423 ITGA8P53708 1063 aa12.02□□□□□ -0.49
VARS2-213ENST00000625423 GCNT1Q02742 428 aa12.02□□□□□ -0.49
VARS2-213ENST00000625423 USP37Q86T82 979 aa12.02□□□□□ -0.49
VARS2-213ENST00000625423 ZNF516Q92618 1163 aa12.02□□□□□ -0.49
VARS2-213ENST00000625423 ARHGEF2Q92974 986 aaKnown RBP12.02□□□□□ -0.49
VARS2-213ENST00000625423 BICD1Q96G01 975 aa12.02□□□□□ -0.49
VARS2-213ENST00000625423 SNF8Q96H20 258 aa12.02□□□□□ -0.49
VARS2-213ENST00000625423 PWWP2AQ96N64 755 aa12.02□□□□□ -0.49
VARS2-213ENST00000625423 NTPCRQ9BSD7 190 aaKnown RBP12.02□□□□□ -0.49
VARS2-213ENST00000625423 HEMGNQ9BXL5 484 aa12.02□□□□□ -0.49
VARS2-213ENST00000625423 MOV10L1Q9BXT6 1211 aaKnown RBP12.02□□□□□ -0.49
VARS2-213ENST00000625423 RGS17Q9UGC6 210 aaPredicted RBP12.02□□□□□ -0.49
VARS2-213ENST00000625423 R3HDM2Q9Y2K5 976 aaKnown RBP12.02□□□□□ -0.49
VARS2-213ENST00000625423 CTDP1Q9Y5B0 961 aaPredicted RBP12.02□□□□□ -0.49
VARS2-213ENST00000625423 MYPNQ86TC9 1320 aa12.01□□□□□ -0.49
VARS2-213ENST00000625423 PARP9Q8IXQ6 854 aa12.01□□□□□ -0.49
VARS2-213ENST00000625423 SPIRE2Q8WWL2 714 aa12.01□□□□□ -0.49
VARS2-213ENST00000625423 LPAR1Q92633 364 aa12.01□□□□□ -0.49
VARS2-213ENST00000625423 FAM118BQ9BPY3 351 aa12.01□□□□□ -0.49
VARS2-213ENST00000625423 DCLK3Q9C098 648 aa12.01□□□□□ -0.49
VARS2-213ENST00000625423 C1orf112Q9NSG2 853 aa12.01□□□□□ -0.49
VARS2-213ENST00000625423 CTNNAL1Q9UBT7 734 aa12.01□□□□□ -0.49
VARS2-213ENST00000625423 TELO2Q9Y4R8 837 aa12.01□□□□□ -0.49
VARS2-213ENST00000625423 PCDHA10Q9Y5I2 948 aa12.01□□□□□ -0.49
VARS2-213ENST00000625423 O00370 1275 aa12.01□□□□□ -0.49
VARS2-213ENST00000625423 CHUKO15111 745 aa12.01□□□□□ -0.49
VARS2-213ENST00000625423 SP4Q02446 784 aa12.01□□□□□ -0.49
VARS2-213ENST00000625423 ITIH4Q14624 930 aa12.01□□□□□ -0.49
VARS2-213ENST00000625423 KYNUQ16719 465 aa12.01□□□□□ -0.49
VARS2-213ENST00000625423 NLRX1Q86UT6 975 aa12.01□□□□□ -0.49
VARS2-213ENST00000625423 SGSM3Q96HU1 749 aa12.01□□□□□ -0.49
VARS2-213ENST00000625423 WNT10BO00744 389 aa12.01□□□□□ -0.49
VARS2-213ENST00000625423 MAP3K10Q02779 954 aa12.01□□□□□ -0.49
VARS2-213ENST00000625423 XRCC4Q13426 336 aa12.01□□□□□ -0.49
VARS2-213ENST00000625423 PTK6Q13882 451 aa12.01□□□□□ -0.49
VARS2-213ENST00000625423 TAX1BP1Q86VP1 789 aa12.01□□□□□ -0.49
VARS2-213ENST00000625423 CCDC50Q8IVM0 306 aa12.01□□□□□ -0.49
VARS2-213ENST00000625423 DYDC1Q8WWB3 177 aa12.01□□□□□ -0.49
VARS2-213ENST00000625423 ZKSCAN4Q969J2 545 aaPredicted RBP12.01□□□□□ -0.49
VARS2-213ENST00000625423 DDX27Q96GQ7 796 aaKnown RBP12.01□□□□□ -0.49
VARS2-213ENST00000625423 MLXIPLQ9NP71 852 aa12.01□□□□□ -0.49
VARS2-213ENST00000625423 HOMER3Q9NSC5 361 aa12.01□□□□□ -0.49
VARS2-213ENST00000625423 MAP3K20Q9NYL2 800 aaKnown RBP12.01□□□□□ -0.49
VARS2-213ENST00000625423 CD2APQ9Y5K6 639 aa12.01□□□□□ -0.49
VARS2-213ENST00000625423 TMEM120BA0PK00 339 aa12□□□□□ -0.49
VARS2-213ENST00000625423 SORBS3O60504 671 aa12□□□□□ -0.49
VARS2-213ENST00000625423 DNAJC8O75937 253 aaPredicted RBP12□□□□□ -0.49
VARS2-213ENST00000625423 SSTR3P32745 418 aaPredicted RBP12□□□□□ -0.49
VARS2-213ENST00000625423 ADCY8P40145 1251 aa12□□□□□ -0.49
VARS2-213ENST00000625423 PDE4CQ08493 712 aa12□□□□□ -0.49
VARS2-213ENST00000625423 BAATQ14032 418 aaPredicted RBP12□□□□□ -0.49
VARS2-213ENST00000625423 SPOPLQ6IQ16 392 aa12□□□□□ -0.49
VARS2-213ENST00000625423 ENOSF1Q7L5Y1 443 aa12□□□□□ -0.49
VARS2-213ENST00000625423 TAS1R3Q7RTX0 852 aa12□□□□□ -0.49
VARS2-213ENST00000625423 SAMD3Q8N6K7 520 aa12□□□□□ -0.49
VARS2-213ENST00000625423 SERPINB12Q96P63 405 aa12□□□□□ -0.49
VARS2-213ENST00000625423 KIAA1683Q9H0B3 1180 aa12□□□□□ -0.49
VARS2-213ENST00000625423 AVENQ9NQS1 362 aaPredicted RBP12□□□□□ -0.49
VARS2-213ENST00000625423 PCDHB2Q9Y5E7 798 aa12□□□□□ -0.49
VARS2-213ENST00000625423 COL4A5P29400 1685 aa12□□□□□ -0.49
VARS2-213ENST00000625423 TTC4O95801 387 aa12□□□□□ -0.49
VARS2-213ENST00000625423 GAS8O95995 478 aa12□□□□□ -0.49
VARS2-213ENST00000625423 CFHP08603 1231 aa12□□□□□ -0.49
VARS2-213ENST00000625423 RALAP11233 206 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms