RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 PPP4R3CPQ6ZMV5 832 aa16.22■□□□□ 0.19
PNKP-218ENST00000625299 CENPQQ7L2Z9 268 aaPredicted RBP16.22■□□□□ 0.19
PNKP-218ENST00000625299 PRIMPOLQ96LW4 560 aa16.22■□□□□ 0.19
PNKP-218ENST00000625299 HSD17B14Q9BPX1 270 aa16.22■□□□□ 0.19
PNKP-218ENST00000625299 RTKNQ9BST9 563 aa16.22■□□□□ 0.19
PNKP-218ENST00000625299 PARD6AQ9NPB6 346 aa16.22■□□□□ 0.19
PNKP-218ENST00000625299 MTRRQ9UBK8 725 aa16.22■□□□□ 0.19
PNKP-218ENST00000625299 PCDHA12Q9UN75 941 aa16.22■□□□□ 0.19
PNKP-218ENST00000625299 USP20Q9Y2K6 914 aa16.22■□□□□ 0.19
PNKP-218ENST00000625299 GDAQ9Y2T3 454 aa16.22■□□□□ 0.19
PNKP-218ENST00000625299 I3L4J1 428 aa16.21■□□□□ 0.19
PNKP-218ENST00000625299 B3GAT3O94766 335 aa16.21■□□□□ 0.19
PNKP-218ENST00000625299 LRG1P02750 347 aa16.21■□□□□ 0.19
PNKP-218ENST00000625299 FGFR3P22607 806 aa16.21■□□□□ 0.19
PNKP-218ENST00000625299 IGFBP6P24592 240 aaPredicted RBP16.21■□□□□ 0.19
PNKP-218ENST00000625299 SPEM2Q0P670 501 aa16.21■□□□□ 0.19
PNKP-218ENST00000625299 NR5A1Q13285 461 aa16.21■□□□□ 0.19
PNKP-218ENST00000625299 PRR23BQ6ZRT6 265 aa16.21■□□□□ 0.19
PNKP-218ENST00000625299 NELL1Q92832 810 aa16.21■□□□□ 0.19
PNKP-218ENST00000625299 ADPGKQ9BRR6 497 aa16.21■□□□□ 0.19
PNKP-218ENST00000625299 TTC12Q9H892 705 aaPredicted RBP16.21■□□□□ 0.19
PNKP-218ENST00000625299 BRD9Q9H8M2 597 aa16.21■□□□□ 0.19
PNKP-218ENST00000625299 GDE1Q9NZC3 331 aa16.21■□□□□ 0.19
PNKP-218ENST00000625299 PRRG1O14668 218 aa16.2■□□□□ 0.18
PNKP-218ENST00000625299 PRKCBP05771 671 aa16.2■□□□□ 0.18
PNKP-218ENST00000625299 KCNA4P22459 653 aa16.2■□□□□ 0.18
PNKP-218ENST00000625299 TKTP29401 623 aaKnown RBP16.2■□□□□ 0.18
PNKP-218ENST00000625299 TXKP42681 527 aa16.2■□□□□ 0.18
PNKP-218ENST00000625299 SCRN1Q12765 414 aa16.2■□□□□ 0.18
PNKP-218ENST00000625299 NAB2Q15742 525 aa16.2■□□□□ 0.18
PNKP-218ENST00000625299 CDCA2Q69YH5 1023 aaPredicted RBP16.2■□□□□ 0.18
PNKP-218ENST00000625299 FZD8Q9H461 694 aa16.2■□□□□ 0.18
PNKP-218ENST00000625299 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.2■□□□□ 0.18
PNKP-218ENST00000625299 TRIP11Q15643 1979 aa16.2■□□□□ 0.18
PNKP-218ENST00000625299 MAP1BP46821 2468 aaKnown RBP16.2■□□□□ 0.18
PNKP-218ENST00000625299 STK36Q9NRP7 1315 aa16.19■□□□□ 0.18
PNKP-218ENST00000625299 TICRRQ7Z2Z1 1910 aa16.19■□□□□ 0.18
PNKP-218ENST00000625299 PTPN2P17706 415 aa16.19■□□□□ 0.18
PNKP-218ENST00000625299 ATP2B1P20020 1258 aa16.19■□□□□ 0.18
PNKP-218ENST00000625299 TGM1P22735 817 aa16.19■□□□□ 0.18
PNKP-218ENST00000625299 ELF1P32519 619 aa16.19■□□□□ 0.18
PNKP-218ENST00000625299 KRT2P35908 639 aa16.19■□□□□ 0.18
PNKP-218ENST00000625299 CLCNKBP51801 687 aa16.19■□□□□ 0.18
PNKP-218ENST00000625299 ARPP19P56211 112 aa16.19■□□□□ 0.18
PNKP-218ENST00000625299 FZD5Q13467 585 aa16.19■□□□□ 0.18
PNKP-218ENST00000625299 MAPK6Q16659 721 aa16.19■□□□□ 0.18
PNKP-218ENST00000625299 ST3GAL2Q16842 350 aa16.19■□□□□ 0.18
PNKP-218ENST00000625299 FAM187BQ17R55 369 aa16.19■□□□□ 0.18
PNKP-218ENST00000625299 POTEHQ6S545 545 aa16.19■□□□□ 0.18
PNKP-218ENST00000625299 DNASE1L2Q92874 299 aa16.19■□□□□ 0.18
PNKP-218ENST00000625299 ELSPBP1Q96BH3 223 aa16.19■□□□□ 0.18
PNKP-218ENST00000625299 DDX27Q96GQ7 796 aaKnown RBP16.19■□□□□ 0.18
PNKP-218ENST00000625299 CORO1BQ9BR76 489 aa16.19■□□□□ 0.18
PNKP-218ENST00000625299 FAM126AQ9BYI3 521 aaPredicted RBP16.19■□□□□ 0.18
PNKP-218ENST00000625299 C2orf40Q9H1Z8 148 aa16.19■□□□□ 0.18
PNKP-218ENST00000625299 GOLGA2P5Q9HBQ8 144 aa16.19■□□□□ 0.18
PNKP-218ENST00000625299 BRMS1Q9HCU9 246 aa16.19■□□□□ 0.18
PNKP-218ENST00000625299 PDRG1Q9NUG6 133 aa16.19■□□□□ 0.18
PNKP-218ENST00000625299 F5P12259 2224 aa16.18■□□□□ 0.18
PNKP-218ENST00000625299 SHISA7A6NL88 538 aa16.18■□□□□ 0.18
PNKP-218ENST00000625299 MAN2B1O00754 1011 aa16.18■□□□□ 0.18
PNKP-218ENST00000625299 NEMFO60524 1076 aa16.18■□□□□ 0.18
PNKP-218ENST00000625299 EDN1P05305 212 aa16.18■□□□□ 0.18
PNKP-218ENST00000625299 BRCC3P46736 316 aa16.18■□□□□ 0.18
PNKP-218ENST00000625299 NRLP54845 237 aa16.18■□□□□ 0.18
PNKP-218ENST00000625299 PPP2R5DQ14738 602 aa16.18■□□□□ 0.18
PNKP-218ENST00000625299 EEF1DP3Q658K8 133 aa16.18■□□□□ 0.18
PNKP-218ENST00000625299 ANKS3Q6ZW76 656 aa16.18■□□□□ 0.18
PNKP-218ENST00000625299 MCPH1Q8NEM0 835 aa16.18■□□□□ 0.18
PNKP-218ENST00000625299 DEPTORQ8TB45 409 aa16.18■□□□□ 0.18
PNKP-218ENST00000625299 BSNDQ8WZ55 320 aa16.18■□□□□ 0.18
PNKP-218ENST00000625299 TCEAL4Q96EI5 215 aa16.18■□□□□ 0.18
PNKP-218ENST00000625299 CHAMP1Q96JM3 812 aa16.18■□□□□ 0.18
PNKP-218ENST00000625299 TRMT61BQ9BVS5 477 aaKnown RBP16.18■□□□□ 0.18
PNKP-218ENST00000625299 CHRDQ9H2X0 955 aa16.18■□□□□ 0.18
PNKP-218ENST00000625299 ZFP14Q9HCL3 533 aa16.18■□□□□ 0.18
PNKP-218ENST00000625299 BACE2Q9Y5Z0 518 aa16.18■□□□□ 0.18
PNKP-218ENST00000625299 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.17■□□□□ 0.18
PNKP-218ENST00000625299 TMEM189-UBE2V1I3L0A0 370 aa16.17■□□□□ 0.18
PNKP-218ENST00000625299 TRAPPC3O43617 180 aa16.17■□□□□ 0.18
PNKP-218ENST00000625299 ADRB1P08588 477 aa16.17■□□□□ 0.18
PNKP-218ENST00000625299 FCARP24071 287 aa16.17■□□□□ 0.18
PNKP-218ENST00000625299 GDI1P31150 447 aa16.17■□□□□ 0.18
PNKP-218ENST00000625299 ROR1Q01973 937 aa16.17■□□□□ 0.18
PNKP-218ENST00000625299 DCAF4L1Q3SXM0 396 aa16.17■□□□□ 0.18
PNKP-218ENST00000625299 PPM1JQ5JR12 505 aa16.17■□□□□ 0.18
PNKP-218ENST00000625299 FAM78AQ5JUQ0 283 aa16.17■□□□□ 0.18
PNKP-218ENST00000625299 LAIR1Q6GTX8 287 aa16.17■□□□□ 0.18
PNKP-218ENST00000625299 RTL10Q7L3V2 364 aa16.17■□□□□ 0.18
PNKP-218ENST00000625299 C3orf58Q8NDZ4 430 aa16.17■□□□□ 0.18
PNKP-218ENST00000625299 FAM3CQ92520 227 aa16.17■□□□□ 0.18
PNKP-218ENST00000625299 KIFC3Q9BVG8 833 aa16.17■□□□□ 0.18
PNKP-218ENST00000625299 LMAN1LQ9HAT1 526 aa16.17■□□□□ 0.18
PNKP-218ENST00000625299 CYP4F11Q9HBI6 524 aa16.17■□□□□ 0.18
PNKP-218ENST00000625299 ORC3Q9UBD5 711 aaPredicted RBP16.17■□□□□ 0.18
PNKP-218ENST00000625299 ZFHX4Q86UP3 3567 aa16.17■□□□□ 0.18
PNKP-218ENST00000625299 RALGAPA1Q6GYQ0 2036 aa16.16■□□□□ 0.18
PNKP-218ENST00000625299 CHD8Q9HCK8 2581 aa16.16■□□□□ 0.18
PNKP-218ENST00000625299 ACKR2O00590 384 aa16.16■□□□□ 0.18
PNKP-218ENST00000625299 TDGF1P13385 188 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms