RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 FAM47CQ5HY64 1035 aa12.71□□□□□ -0.37
LINC00963-220ENST00000625171 ZBTB41Q5SVQ8 909 aa12.71□□□□□ -0.37
LINC00963-220ENST00000625171 PHLDB3Q6NSJ2 640 aa12.71□□□□□ -0.37
LINC00963-220ENST00000625171 RRAGAQ7L523 313 aa12.71□□□□□ -0.37
LINC00963-220ENST00000625171 IRF2BP2Q7Z5L9 587 aa12.71□□□□□ -0.37
LINC00963-220ENST00000625171 NECAB2Q7Z6G3 386 aa12.71□□□□□ -0.37
LINC00963-220ENST00000625171 ZBTB33Q86T24 672 aa12.71□□□□□ -0.37
LINC00963-220ENST00000625171 CAGE1Q8TC20 777 aa12.71□□□□□ -0.37
LINC00963-220ENST00000625171 DHX38Q92620 1227 aaKnown RBP12.71□□□□□ -0.37
LINC00963-220ENST00000625171 ZNF668Q96K58 619 aaPredicted RBP12.71□□□□□ -0.37
LINC00963-220ENST00000625171 TOX2Q96NM4 488 aa12.71□□□□□ -0.37
LINC00963-220ENST00000625171 ACAP3Q96P50 834 aa12.71□□□□□ -0.37
LINC00963-220ENST00000625171 DEFB118Q96PH6 123 aa12.71□□□□□ -0.37
LINC00963-220ENST00000625171 POP1Q99575 1024 aaKnown RBP12.71□□□□□ -0.37
LINC00963-220ENST00000625171 CCDC94Q9BW85 323 aaPredicted RBP12.71□□□□□ -0.37
LINC00963-220ENST00000625171 VRTNQ9H8Y1 702 aa12.71□□□□□ -0.37
LINC00963-220ENST00000625171 PYCARDQ9ULZ3 195 aa12.71□□□□□ -0.37
LINC00963-220ENST00000625171 TRIP12Q14669 1992 aaPredicted RBP12.7□□□□□ -0.38
LINC00963-220ENST00000625171 MROH7Q68CQ1 1323 aa12.7□□□□□ -0.38
LINC00963-220ENST00000625171 LRRC53A6NM62 1247 aa12.7□□□□□ -0.38
LINC00963-220ENST00000625171 CSDE1O75534 798 aaKnown RBP12.7□□□□□ -0.38
LINC00963-220ENST00000625171 RPS6KA5O75582 802 aa12.7□□□□□ -0.38
LINC00963-220ENST00000625171 SERPING1P05155 500 aa12.7□□□□□ -0.38
LINC00963-220ENST00000625171 DLATP10515 647 aaKnown RBP12.7□□□□□ -0.38
LINC00963-220ENST00000625171 FERP16591 822 aa12.7□□□□□ -0.38
LINC00963-220ENST00000625171 STAT1P42224 750 aa12.7□□□□□ -0.38
LINC00963-220ENST00000625171 MFAP3P55082 362 aa12.7□□□□□ -0.38
LINC00963-220ENST00000625171 WNT7BP56706 349 aa12.7□□□□□ -0.38
LINC00963-220ENST00000625171 ZBTB6Q15916 424 aa12.7□□□□□ -0.38
LINC00963-220ENST00000625171 TMEM132AQ24JP5 1023 aa12.7□□□□□ -0.38
LINC00963-220ENST00000625171 ASTE1Q2TB18 679 aaPredicted RBP12.7□□□□□ -0.38
LINC00963-220ENST00000625171 FBXO47Q5MNV8 452 aa12.7□□□□□ -0.38
LINC00963-220ENST00000625171 UBXN11Q5T124 520 aa12.7□□□□□ -0.38
LINC00963-220ENST00000625171 SFMBT2Q5VUG0 894 aa12.7□□□□□ -0.38
LINC00963-220ENST00000625171 TDRD10Q5VZ19 366 aaKnown RBP12.7□□□□□ -0.38
LINC00963-220ENST00000625171 E4F1Q66K89 784 aaPredicted RBP12.7□□□□□ -0.38
LINC00963-220ENST00000625171 HGSNATQ68CP4 663 aa12.7□□□□□ -0.38
LINC00963-220ENST00000625171 ANKRD33Q7Z3H0 272 aa12.7□□□□□ -0.38
LINC00963-220ENST00000625171 MRPL10Q7Z7H8 261 aaKnown RBP12.7□□□□□ -0.38
LINC00963-220ENST00000625171 FAM228AQ86W67 206 aa12.7□□□□□ -0.38
LINC00963-220ENST00000625171 THNSL1Q8IYQ7 743 aa12.7□□□□□ -0.38
LINC00963-220ENST00000625171 HELQQ8TDG4 1101 aa12.7□□□□□ -0.38
LINC00963-220ENST00000625171 TAS1R2Q8TE23 839 aa12.7□□□□□ -0.38
LINC00963-220ENST00000625171 WNT8BQ93098 351 aa12.7□□□□□ -0.38
LINC00963-220ENST00000625171 CPB2Q96IY4 423 aa12.7□□□□□ -0.38
LINC00963-220ENST00000625171 DNAJC12Q9UKB3 198 aa12.7□□□□□ -0.38
LINC00963-220ENST00000625171 STXBP5LQ9Y2K9 1186 aa12.7□□□□□ -0.38
LINC00963-220ENST00000625171 NOC2LQ9Y3T9 749 aaKnown RBP12.7□□□□□ -0.38
LINC00963-220ENST00000625171 EPN1Q9Y6I3 576 aaPredicted RBP12.7□□□□□ -0.38
LINC00963-220ENST00000625171 GOLGA6L9A6NEM1 432 aa12.69□□□□□ -0.38
LINC00963-220ENST00000625171 EIF3CLB5ME19 914 aaKnown RBP12.69□□□□□ -0.38
LINC00963-220ENST00000625171 RBAK-RBAKDNI3L0D1 243 aa12.69□□□□□ -0.38
LINC00963-220ENST00000625171 PITPNM1O00562 1244 aa12.69□□□□□ -0.38
LINC00963-220ENST00000625171 MEFVO15553 781 aaPredicted RBP12.69□□□□□ -0.38
LINC00963-220ENST00000625171 ZSCAN12O43309 604 aa12.69□□□□□ -0.38
LINC00963-220ENST00000625171 PARNO95453 639 aaKnown RBP12.69□□□□□ -0.38
LINC00963-220ENST00000625171 VNN1O95497 513 aa12.69□□□□□ -0.38
LINC00963-220ENST00000625171 ASS1P00966 412 aaKnown RBP12.69□□□□□ -0.38
LINC00963-220ENST00000625171 ACTN1P12814 892 aa12.69□□□□□ -0.38
LINC00963-220ENST00000625171 ATICP31939 592 aa12.69□□□□□ -0.38
LINC00963-220ENST00000625171 TMEM62Q0P6H9 643 aa12.69□□□□□ -0.38
LINC00963-220ENST00000625171 DSC3Q14574 896 aa12.69□□□□□ -0.38
LINC00963-220ENST00000625171 SGSM1Q2NKQ1 1148 aa12.69□□□□□ -0.38
LINC00963-220ENST00000625171 WDR44Q5JSH3 913 aa12.69□□□□□ -0.38
LINC00963-220ENST00000625171 IQCEQ6IPM2 695 aa12.69□□□□□ -0.38
LINC00963-220ENST00000625171 TRAF7Q6Q0C0 670 aa12.69□□□□□ -0.38
LINC00963-220ENST00000625171 TRAPPC11Q7Z392 1133 aa12.69□□□□□ -0.38
LINC00963-220ENST00000625171 FAM126BQ8IXS8 530 aa12.69□□□□□ -0.38
LINC00963-220ENST00000625171 CEP120Q8N960 986 aa12.69□□□□□ -0.38
LINC00963-220ENST00000625171 CXorf38Q8TB03 319 aa12.69□□□□□ -0.38
LINC00963-220ENST00000625171 SHC3Q92529 594 aa12.69□□□□□ -0.38
LINC00963-220ENST00000625171 SEMA4DQ92854 862 aa12.69□□□□□ -0.38
LINC00963-220ENST00000625171 ANKRD36BP1Q96IX9 119 aa12.69□□□□□ -0.38
LINC00963-220ENST00000625171 PAWRQ96IZ0 340 aaKnown RBP12.69□□□□□ -0.38
LINC00963-220ENST00000625171 NT5C1BQ96P26 610 aa12.69□□□□□ -0.38
LINC00963-220ENST00000625171 SPAG5Q96R06 1193 aa12.69□□□□□ -0.38
LINC00963-220ENST00000625171 EIF3CQ99613 913 aaKnown RBP12.69□□□□□ -0.38
LINC00963-220ENST00000625171 GPR88Q9GZN0 384 aa12.69□□□□□ -0.38
LINC00963-220ENST00000625171 ERVK-5Q9HDB9 667 aa12.69□□□□□ -0.38
LINC00963-220ENST00000625171 TOPORSQ9NS56 1045 aaPredicted RBP12.69□□□□□ -0.38
LINC00963-220ENST00000625171 CNTN3Q9P232 1028 aa12.69□□□□□ -0.38
LINC00963-220ENST00000625171 ARHGAP20Q9P2F6 1191 aa12.69□□□□□ -0.38
LINC00963-220ENST00000625171 ST3GAL5Q9UNP4 418 aa12.69□□□□□ -0.38
LINC00963-220ENST00000625171 CNTN6Q9UQ52 1028 aa12.69□□□□□ -0.38
LINC00963-220ENST00000625171 FHOD1Q9Y613 1164 aa12.69□□□□□ -0.38
LINC00963-220ENST00000625171 FRMPD3Q5JV73 1810 aa12.69□□□□□ -0.38
LINC00963-220ENST00000625171 ATP8B3O60423 1300 aa12.68□□□□□ -0.38
LINC00963-220ENST00000625171 PTPRJQ12913 1337 aa12.68□□□□□ -0.38
LINC00963-220ENST00000625171 LACTBL1A8MY62 500 aa12.68□□□□□ -0.38
LINC00963-220ENST00000625171 F8VZ95 297 aa12.68□□□□□ -0.38
LINC00963-220ENST00000625171 NDUFA10O95299 355 aa12.68□□□□□ -0.38
LINC00963-220ENST00000625171 HLA-DRAP01903 254 aa12.68□□□□□ -0.38
LINC00963-220ENST00000625171 TNNC2P02585 160 aa12.68□□□□□ -0.38
LINC00963-220ENST00000625171 COL6A1P12109 1028 aa12.68□□□□□ -0.38
LINC00963-220ENST00000625171 CKBP12277 381 aa12.68□□□□□ -0.38
LINC00963-220ENST00000625171 SKIP12755 728 aa12.68□□□□□ -0.38
LINC00963-220ENST00000625171 KCNE1P15382 129 aa12.68□□□□□ -0.38
LINC00963-220ENST00000625171 CYP3A5P20815 502 aa12.68□□□□□ -0.38
LINC00963-220ENST00000625171 TBXAS1P24557 533 aaPredicted RBP12.68□□□□□ -0.38
LINC00963-220ENST00000625171 CYLC1P35663 651 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms