RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 SLFN12LQ6IEE8 588 aa13.59□□□□□ -0.23
LINC00963-217ENST00000624009 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.59□□□□□ -0.23
LINC00963-217ENST00000624009 C15orf39Q6ZRI6 1047 aa13.59□□□□□ -0.23
LINC00963-217ENST00000624009 RTL10Q7L3V2 364 aa13.59□□□□□ -0.23
LINC00963-217ENST00000624009 CD302Q8IX05 232 aa13.59□□□□□ -0.23
LINC00963-217ENST00000624009 CEP120Q8N960 986 aa13.59□□□□□ -0.23
LINC00963-217ENST00000624009 IQUBQ8NA54 791 aa13.59□□□□□ -0.23
LINC00963-217ENST00000624009 PIK3R5Q8WYR1 880 aa13.59□□□□□ -0.23
LINC00963-217ENST00000624009 BICD1Q96G01 975 aa13.59□□□□□ -0.23
LINC00963-217ENST00000624009 FBXL18Q96ME1 805 aa13.59□□□□□ -0.23
LINC00963-217ENST00000624009 TTPALQ9BTX7 342 aa13.59□□□□□ -0.23
LINC00963-217ENST00000624009 STRA6Q9BX79 667 aa13.59□□□□□ -0.23
LINC00963-217ENST00000624009 PLEKHA4Q9H4M7 779 aa13.59□□□□□ -0.23
LINC00963-217ENST00000624009 SFXN1Q9H9B4 322 aa13.59□□□□□ -0.23
LINC00963-217ENST00000624009 KBTBD4Q9NVX7 518 aa13.59□□□□□ -0.23
LINC00963-217ENST00000624009 ANKFY1Q9P2R3 1169 aa13.59□□□□□ -0.23
LINC00963-217ENST00000624009 TTC26A0AVF1 554 aa13.58□□□□□ -0.24
LINC00963-217ENST00000624009 CASTOR2A6NHX0 329 aa13.58□□□□□ -0.24
LINC00963-217ENST00000624009 MYMKA6NI61 221 aa13.58□□□□□ -0.24
LINC00963-217ENST00000624009 OGTO15294 1046 aa13.58□□□□□ -0.24
LINC00963-217ENST00000624009 TEX28O15482 410 aa13.58□□□□□ -0.24
LINC00963-217ENST00000624009 FAM189A1O60320 539 aa13.58□□□□□ -0.24
LINC00963-217ENST00000624009 KIF4AO95239 1232 aa13.58□□□□□ -0.24
LINC00963-217ENST00000624009 GLUD1P00367 558 aa13.58□□□□□ -0.24
LINC00963-217ENST00000624009 CYP3A5P20815 502 aa13.58□□□□□ -0.24
LINC00963-217ENST00000624009 PAX3P23760 479 aa13.58□□□□□ -0.24
LINC00963-217ENST00000624009 CA8P35219 290 aa13.58□□□□□ -0.24
LINC00963-217ENST00000624009 RBM10P98175 930 aaKnown RBP13.58□□□□□ -0.24
LINC00963-217ENST00000624009 POSTNQ15063 836 aa13.58□□□□□ -0.24
LINC00963-217ENST00000624009 SLC10A6Q3KNW5 377 aa13.58□□□□□ -0.24
LINC00963-217ENST00000624009 LLGL2Q6P1M3 1020 aa13.58□□□□□ -0.24
LINC00963-217ENST00000624009 TAS1R1Q7RTX1 841 aa13.58□□□□□ -0.24
LINC00963-217ENST00000624009 ZBTB33Q86T24 672 aa13.58□□□□□ -0.24
LINC00963-217ENST00000624009 AUTS2Q8WXX7 1259 aa13.58□□□□□ -0.24
LINC00963-217ENST00000624009 ZBTB45Q96K62 511 aaPredicted RBP13.58□□□□□ -0.24
LINC00963-217ENST00000624009 RIPOR3Q96MK2 946 aa13.58□□□□□ -0.24
LINC00963-217ENST00000624009 PAAF1Q9BRP4 392 aa13.58□□□□□ -0.24
LINC00963-217ENST00000624009 CD320Q9NPF0 282 aa13.58□□□□□ -0.24
LINC00963-217ENST00000624009 RCOR1Q9UKL0 485 aa13.58□□□□□ -0.24
LINC00963-217ENST00000624009 ATP6V1DQ9Y5K8 247 aa13.58□□□□□ -0.24
LINC00963-217ENST00000624009 SCN1AP35498 2009 aa13.57□□□□□ -0.24
LINC00963-217ENST00000624009 A0A087X0B3 334 aa13.57□□□□□ -0.24
LINC00963-217ENST00000624009 F8W810 466 aa13.57□□□□□ -0.24
LINC00963-217ENST00000624009 XPOTO43592 962 aaKnown RBP13.57□□□□□ -0.24
LINC00963-217ENST00000624009 B3GAT3O94766 335 aa13.57□□□□□ -0.24
LINC00963-217ENST00000624009 EPCAMP16422 314 aa13.57□□□□□ -0.24
LINC00963-217ENST00000624009 FGFR3P22607 806 aa13.57□□□□□ -0.24
LINC00963-217ENST00000624009 ATAT1Q5SQI0 421 aa13.57□□□□□ -0.24
LINC00963-217ENST00000624009 CXCL16Q9H2A7 254 aa13.57□□□□□ -0.24
LINC00963-217ENST00000624009 TFIP11Q9UBB9 837 aaKnown RBP13.57□□□□□ -0.24
LINC00963-217ENST00000624009 EXOC7Q9UPT5 735 aa13.57□□□□□ -0.24
LINC00963-217ENST00000624009 USTQ9Y2C2 406 aa13.57□□□□□ -0.24
LINC00963-217ENST00000624009 NR2E1Q9Y466 385 aa13.57□□□□□ -0.24
LINC00963-217ENST00000624009 PCDHB13Q9Y5F0 798 aa13.57□□□□□ -0.24
LINC00963-217ENST00000624009 SYN3O14994 580 aa13.56□□□□□ -0.24
LINC00963-217ENST00000624009 NMT1P30419 496 aaKnown RBP13.56□□□□□ -0.24
LINC00963-217ENST00000624009 LRPAP1P30533 357 aa13.56□□□□□ -0.24
LINC00963-217ENST00000624009 CLCNKBP51801 687 aa13.56□□□□□ -0.24
LINC00963-217ENST00000624009 OSTNP61366 133 aa13.56□□□□□ -0.24
LINC00963-217ENST00000624009 PPP2R3AQ06190 1150 aa13.56□□□□□ -0.24
LINC00963-217ENST00000624009 SOX4Q06945 474 aaPredicted RBP13.56□□□□□ -0.24
LINC00963-217ENST00000624009 PKP1Q13835 747 aa13.56□□□□□ -0.24
LINC00963-217ENST00000624009 BECN1Q14457 450 aa13.56□□□□□ -0.24
LINC00963-217ENST00000624009 ZBTB6Q15916 424 aa13.56□□□□□ -0.24
LINC00963-217ENST00000624009 HERC4Q5GLZ8 1057 aaPredicted RBP13.56□□□□□ -0.24
LINC00963-217ENST00000624009 GLRA4Q5JXX5 417 aa13.56□□□□□ -0.24
LINC00963-217ENST00000624009 L1TD1Q5T7N2 865 aaKnown RBP13.56□□□□□ -0.24
LINC00963-217ENST00000624009 FAM171A1Q5VUB5 890 aa13.56□□□□□ -0.24
LINC00963-217ENST00000624009 RESP18Q5W5W9 173 aa13.56□□□□□ -0.24
LINC00963-217ENST00000624009 LILRA6Q6PI73 481 aa13.56□□□□□ -0.24
LINC00963-217ENST00000624009 SHC4Q6S5L8 630 aa13.56□□□□□ -0.24
LINC00963-217ENST00000624009 STXBP4Q6ZWJ1 553 aa13.56□□□□□ -0.24
LINC00963-217ENST00000624009 DYMQ7RTS9 669 aa13.56□□□□□ -0.24
LINC00963-217ENST00000624009 GPR149Q86SP6 731 aa13.56□□□□□ -0.24
LINC00963-217ENST00000624009 SFR1Q86XK3 245 aa13.56□□□□□ -0.24
LINC00963-217ENST00000624009 CCDC65Q8IXS2 484 aa13.56□□□□□ -0.24
LINC00963-217ENST00000624009 LNX1Q8TBB1 728 aaPredicted RBP13.56□□□□□ -0.24
LINC00963-217ENST00000624009 RIN2Q8WYP3 895 aaPredicted RBP13.56□□□□□ -0.24
LINC00963-217ENST00000624009 ZMAT2Q96NC0 199 aaKnown RBP13.56□□□□□ -0.24
LINC00963-217ENST00000624009 MSTO1Q9BUK6 570 aa13.56□□□□□ -0.24
LINC00963-217ENST00000624009 HAPLN2Q9GZV7 340 aa13.56□□□□□ -0.24
LINC00963-217ENST00000624009 ZHX3Q9H4I2 956 aa13.56□□□□□ -0.24
LINC00963-217ENST00000624009 ASB7Q9H672 318 aa13.56□□□□□ -0.24
LINC00963-217ENST00000624009 MRPL44Q9H9J2 332 aaKnown RBP13.56□□□□□ -0.24
LINC00963-217ENST00000624009 ZDHHC7Q9NXF8 308 aa13.56□□□□□ -0.24
LINC00963-217ENST00000624009 CPSF3Q9UKF6 684 aaKnown RBP13.56□□□□□ -0.24
LINC00963-217ENST00000624009 UBQLN1Q9UMX0 589 aaKnown RBP13.56□□□□□ -0.24
LINC00963-217ENST00000624009 DERAQ9Y315 318 aa13.56□□□□□ -0.24
LINC00963-217ENST00000624009 BACE2Q9Y5Z0 518 aa13.56□□□□□ -0.24
LINC00963-217ENST00000624009 PODXLO00592 558 aa13.55□□□□□ -0.24
LINC00963-217ENST00000624009 C2CD2LO14523 706 aa13.55□□□□□ -0.24
LINC00963-217ENST00000624009 KIAA0391O15091 583 aaKnown RBP13.55□□□□□ -0.24
LINC00963-217ENST00000624009 MEFVO15553 781 aaPredicted RBP13.55□□□□□ -0.24
LINC00963-217ENST00000624009 DCXO43602 365 aa13.55□□□□□ -0.24
LINC00963-217ENST00000624009 GPR37L1O60883 481 aa13.55□□□□□ -0.24
LINC00963-217ENST00000624009 POU2F2P09086 479 aa13.55□□□□□ -0.24
LINC00963-217ENST00000624009 CXCL8P10145 99 aa13.55□□□□□ -0.24
LINC00963-217ENST00000624009 MATR3P43243 847 aaKnown RBP eCLIP13.55□□□□□ -0.24
LINC00963-217ENST00000624009 ME1P48163 572 aa13.55□□□□□ -0.24
LINC00963-217ENST00000624009 PSMD5Q16401 504 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 208.1 ms