RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 PPP2R2CQ9Y2T4 447 aa7.56□□□□□ -1.2
CBWD3-219ENST00000622817 ADGRG1Q9Y653 693 aa7.56□□□□□ -1.2
CBWD3-219ENST00000622817 BZW2Q9Y6E2 419 aaKnown RBP7.56□□□□□ -1.2
CBWD3-219ENST00000622817 EPN1Q9Y6I3 576 aaPredicted RBP7.56□□□□□ -1.2
CBWD3-219ENST00000622817 TRIP12Q14669 1992 aaPredicted RBP7.55□□□□□ -1.2
CBWD3-219ENST00000622817 SSU72P8A0A1W2PR75 194 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 USP27XA6NNY8 438 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 B4GALT4O60513 344 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 PHACTR2O75167 634 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 NDUFA10O95299 355 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 IPO7O95373 1038 aaKnown RBP7.55□□□□□ -1.2
CBWD3-219ENST00000622817 C4BPAP04003 597 aaKnown RBP7.55□□□□□ -1.2
CBWD3-219ENST00000622817 CCDC172P0C7W6 258 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 STAG3L1P0CL83 205 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 HOXA11P31270 313 aaPredicted RBP7.55□□□□□ -1.2
CBWD3-219ENST00000622817 MFAP3P55082 362 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 WNT7BP56706 349 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 KRT83P78385 493 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 LSM11P83369 360 aaKnown RBP eCLIP7.55□□□□□ -1.2
CBWD3-219ENST00000622817 KLHL30Q0D2K2 578 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 BIRC3Q13489 604 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 ITGA7Q13683 1181 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 DRAP1Q14919 205 aaPredicted RBP7.55□□□□□ -1.2
CBWD3-219ENST00000622817 ENOX2Q16206 610 aaKnown RBP7.55□□□□□ -1.2
CBWD3-219ENST00000622817 PTGISQ16647 500 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 DUOXA2Q1HG44 320 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 WDR44Q5JSH3 913 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 PHLDB3Q6NSJ2 640 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 NOTUMQ6P988 496 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 SLC27A1Q6PCB7 646 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 CDR2LQ86X02 465 aaPredicted RBP7.55□□□□□ -1.2
CBWD3-219ENST00000622817 TAS1R2Q8TE23 839 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 SEMA4DQ92854 862 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 PPP1R13BQ96KQ4 1090 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 FAM81BQ96LP2 452 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 GLT1D1Q96MS3 346 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 NT5C1BQ96P26 610 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 DESI2Q9BSY9 194 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.55□□□□□ -1.2
CBWD3-219ENST00000622817 UBE2TQ9NPD8 197 aaPredicted RBP7.55□□□□□ -1.2
CBWD3-219ENST00000622817 TRPV2Q9Y5S1 764 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 GRIN2DO15399 1336 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 EIF3CLB5ME19 914 aaKnown RBP7.55□□□□□ -1.2
CBWD3-219ENST00000622817 KBTBD13C9JR72 458 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 F8VZ95 297 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 HLA-DRAP01903 254 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 TNNC2P02585 160 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 TUBB4AP04350 444 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 FERP16591 822 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 FGFR4P22455 802 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 ANXA13P27216 316 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 SOX5P35711 763 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 EIF4A3P38919 411 aaKnown RBP7.55□□□□□ -1.2
CBWD3-219ENST00000622817 GRM5P41594 1212 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 PIK3CAP42336 1068 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 OSTNP61366 133 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 TDRD12Q587J7 1177 aaKnown RBP7.55□□□□□ -1.2
CBWD3-219ENST00000622817 TDRD10Q5VZ19 366 aaKnown RBP7.55□□□□□ -1.2
CBWD3-219ENST00000622817 HGSNATQ68CP4 663 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 LMBRD2Q68DH5 695 aaPredicted RBP7.55□□□□□ -1.2
CBWD3-219ENST00000622817 GJB7Q6PEY0 223 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 ENOSF1Q7L5Y1 443 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 CD302Q8IX05 232 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 SH3TC2Q8TF17 1288 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 DDX27Q96GQ7 796 aaKnown RBP7.55□□□□□ -1.2
CBWD3-219ENST00000622817 EIF3CQ99613 913 aaKnown RBP7.55□□□□□ -1.2
CBWD3-219ENST00000622817 CCDC94Q9BW85 323 aaPredicted RBP7.55□□□□□ -1.2
CBWD3-219ENST00000622817 SEZ6LQ9BYH1 1024 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 DEF6Q9H4E7 631 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 ASB7Q9H672 318 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 ARHGAP20Q9P2F6 1191 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 NOD1Q9Y239 953 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 ARIH1Q9Y4X5 557 aaPredicted RBP7.55□□□□□ -1.2
CBWD3-219ENST00000622817 CDY2AQ9Y6F7 541 aa7.55□□□□□ -1.2
CBWD3-219ENST00000622817 PTPRJQ12913 1337 aa7.54□□□□□ -1.2
CBWD3-219ENST00000622817 A0A0U1RQG5 324 aaPredicted RBP7.54□□□□□ -1.2
CBWD3-219ENST00000622817 LACTBL1A8MY62 500 aa7.54□□□□□ -1.2
CBWD3-219ENST00000622817 KIF2AO00139 706 aaPredicted RBP7.54□□□□□ -1.2
CBWD3-219ENST00000622817 AKR1B10O60218 316 aa7.54□□□□□ -1.2
CBWD3-219ENST00000622817 VNN1O95497 513 aa7.54□□□□□ -1.2
CBWD3-219ENST00000622817 NPTXRO95502 500 aa7.54□□□□□ -1.2
CBWD3-219ENST00000622817 TMEM191BP0C7N4 346 aa7.54□□□□□ -1.2
CBWD3-219ENST00000622817 CXCL8P10145 99 aa7.54□□□□□ -1.2
CBWD3-219ENST00000622817 PRKCIP41743 596 aa7.54□□□□□ -1.2
CBWD3-219ENST00000622817 C1QTNF8P60827 252 aa7.54□□□□□ -1.2
CBWD3-219ENST00000622817 TFAMQ00059 246 aaKnown RBP7.54□□□□□ -1.2
CBWD3-219ENST00000622817 GCNT1Q02742 428 aa7.54□□□□□ -1.2
CBWD3-219ENST00000622817 ARID5AQ03989 594 aa7.54□□□□□ -1.2
CBWD3-219ENST00000622817 PTK7Q13308 1070 aa7.54□□□□□ -1.2
CBWD3-219ENST00000622817 SPA17Q15506 151 aa7.54□□□□□ -1.2
CBWD3-219ENST00000622817 PTPN14Q15678 1187 aa7.54□□□□□ -1.2
CBWD3-219ENST00000622817 TRAPPC11Q7Z392 1133 aa7.54□□□□□ -1.2
CBWD3-219ENST00000622817 IRF2BP2Q7Z5L9 587 aa7.54□□□□□ -1.2
CBWD3-219ENST00000622817 VPS36Q86VN1 386 aa7.54□□□□□ -1.2
CBWD3-219ENST00000622817 ARHGEF19Q8IW93 802 aa7.54□□□□□ -1.2
CBWD3-219ENST00000622817 REXO1L1PQ8IX06 675 aa7.54□□□□□ -1.2
CBWD3-219ENST00000622817 PPM1KQ8N3J5 372 aa7.54□□□□□ -1.2
CBWD3-219ENST00000622817 CEP120Q8N960 986 aa7.54□□□□□ -1.2
CBWD3-219ENST00000622817 OR5B17Q8NGF7 314 aa7.54□□□□□ -1.2
CBWD3-219ENST00000622817 TMEM40Q8WWA1 233 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms