RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 KANSL1LA0AUZ9 987 aa12.08□□□□□ -0.48
LINC00963-214ENST00000622680 XYLBO75191 536 aa12.08□□□□□ -0.48
LINC00963-214ENST00000622680 TKTP29401 623 aaKnown RBP12.08□□□□□ -0.48
LINC00963-214ENST00000622680 HOXA9P31269 272 aa12.08□□□□□ -0.48
LINC00963-214ENST00000622680 CLCNKBP51801 687 aa12.08□□□□□ -0.48
LINC00963-214ENST00000622680 GUCY1B3Q02153 619 aa12.08□□□□□ -0.48
LINC00963-214ENST00000622680 ST3GAL1Q11201 340 aa12.08□□□□□ -0.48
LINC00963-214ENST00000622680 MAPK6Q16659 721 aa12.08□□□□□ -0.48
LINC00963-214ENST00000622680 SLC5A9Q2M3M2 681 aa12.08□□□□□ -0.48
LINC00963-214ENST00000622680 PABPC1LQ4VXU2 614 aaKnown RBP12.08□□□□□ -0.48
LINC00963-214ENST00000622680 POTEHQ6S545 545 aa12.08□□□□□ -0.48
LINC00963-214ENST00000622680 PADI6Q6TGC4 694 aa12.08□□□□□ -0.48
LINC00963-214ENST00000622680 RSPO2Q6UXX9 243 aaPredicted RBP12.08□□□□□ -0.48
LINC00963-214ENST00000622680 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.08□□□□□ -0.48
LINC00963-214ENST00000622680 MTSS1LQ765P7 747 aa12.08□□□□□ -0.48
LINC00963-214ENST00000622680 DDX27Q96GQ7 796 aaKnown RBP12.08□□□□□ -0.48
LINC00963-214ENST00000622680 ADPGKQ9BRR6 497 aa12.08□□□□□ -0.48
LINC00963-214ENST00000622680 C2orf40Q9H1Z8 148 aa12.08□□□□□ -0.48
LINC00963-214ENST00000622680 TUFT1Q9NNX1 390 aa12.08□□□□□ -0.48
LINC00963-214ENST00000622680 SPATA6Q9NWH7 488 aaPredicted RBP12.08□□□□□ -0.48
LINC00963-214ENST00000622680 DNMT3BQ9UBC3 853 aaKnown RBP12.08□□□□□ -0.48
LINC00963-214ENST00000622680 NUP205Q92621 2012 aa12.08□□□□□ -0.48
LINC00963-214ENST00000622680 ARHGEF35A5YM69 484 aa12.07□□□□□ -0.48
LINC00963-214ENST00000622680 CEBPBP17676 345 aa12.07□□□□□ -0.48
LINC00963-214ENST00000622680 FGFR3P22607 806 aa12.07□□□□□ -0.48
LINC00963-214ENST00000622680 BRCC3P46736 316 aa12.07□□□□□ -0.48
LINC00963-214ENST00000622680 SOX4Q06945 474 aaPredicted RBP12.07□□□□□ -0.48
LINC00963-214ENST00000622680 ELAVL2Q12926 359 aaKnown RBP12.07□□□□□ -0.48
LINC00963-214ENST00000622680 RAB33AQ14088 237 aa12.07□□□□□ -0.48
LINC00963-214ENST00000622680 CD300LGQ6UXG3 332 aa12.07□□□□□ -0.48
LINC00963-214ENST00000622680 DGLUCYQ7Z3D6 616 aa12.07□□□□□ -0.48
LINC00963-214ENST00000622680 CEP120Q8N960 986 aa12.07□□□□□ -0.48
LINC00963-214ENST00000622680 SUMF1Q8NBK3 374 aa12.07□□□□□ -0.48
LINC00963-214ENST00000622680 DEPTORQ8TB45 409 aa12.07□□□□□ -0.48
LINC00963-214ENST00000622680 SHDQ96IW2 340 aa12.07□□□□□ -0.48
LINC00963-214ENST00000622680 PPP1R10Q96QC0 940 aaKnown RBP12.07□□□□□ -0.48
LINC00963-214ENST00000622680 DDX23Q9BUQ8 820 aaKnown RBP12.07□□□□□ -0.48
LINC00963-214ENST00000622680 PLA2G2FQ9BZM2 168 aa12.07□□□□□ -0.48
LINC00963-214ENST00000622680 LTB4R2Q9NPC1 389 aa12.07□□□□□ -0.48
LINC00963-214ENST00000622680 MTRRQ9UBK8 725 aa12.07□□□□□ -0.48
LINC00963-214ENST00000622680 ACKR2O00590 384 aa12.06□□□□□ -0.48
LINC00963-214ENST00000622680 KINO60870 393 aaKnown RBP12.06□□□□□ -0.48
LINC00963-214ENST00000622680 B3GAT3O94766 335 aa12.06□□□□□ -0.48
LINC00963-214ENST00000622680 XRCC6P12956 609 aaKnown RBP eCLIP12.06□□□□□ -0.48
LINC00963-214ENST00000622680 NAMPTP43490 491 aa12.06□□□□□ -0.48
LINC00963-214ENST00000622680 TRIM29Q14134 588 aa12.06□□□□□ -0.48
LINC00963-214ENST00000622680 ANKRD1Q15327 319 aa12.06□□□□□ -0.48
LINC00963-214ENST00000622680 DCAF4L1Q3SXM0 396 aa12.06□□□□□ -0.48
LINC00963-214ENST00000622680 SLC44A4Q53GD3 710 aa12.06□□□□□ -0.48
LINC00963-214ENST00000622680 NT5DC1Q5TFE4 455 aa12.06□□□□□ -0.48
LINC00963-214ENST00000622680 ATF7IP2Q5U623 682 aa12.06□□□□□ -0.48
LINC00963-214ENST00000622680 PDXDC1Q6P996 788 aa12.06□□□□□ -0.48
LINC00963-214ENST00000622680 TPRG1Q6ZUI0 275 aa12.06□□□□□ -0.48
LINC00963-214ENST00000622680 RUBCNQ92622 972 aa12.06□□□□□ -0.48
LINC00963-214ENST00000622680 MCRS1Q96EZ8 462 aa12.06□□□□□ -0.48
LINC00963-214ENST00000622680 NACC1Q96RE7 527 aa12.06□□□□□ -0.48
LINC00963-214ENST00000622680 POLR3CQ9BUI4 534 aaPredicted RBP12.06□□□□□ -0.48
LINC00963-214ENST00000622680 BCO2Q9BYV7 579 aa12.06□□□□□ -0.48
LINC00963-214ENST00000622680 USP24Q9UPU5 2620 aa12.06□□□□□ -0.48
LINC00963-214ENST00000622680 FAM170BA6NMN3 283 aa12.05□□□□□ -0.48
LINC00963-214ENST00000622680 TMEM189-UBE2V1I3L0A0 370 aa12.05□□□□□ -0.48
LINC00963-214ENST00000622680 NRG2O14511 850 aaPredicted RBP12.05□□□□□ -0.48
LINC00963-214ENST00000622680 LAMTOR5O43504 91 aa12.05□□□□□ -0.48
LINC00963-214ENST00000622680 RHOP08100 348 aa12.05□□□□□ -0.48
LINC00963-214ENST00000622680 POU2F2P09086 479 aa12.05□□□□□ -0.48
LINC00963-214ENST00000622680 OR52Z1P0C646 297 aa12.05□□□□□ -0.48
LINC00963-214ENST00000622680 CYP11B2P19099 503 aa12.05□□□□□ -0.48
LINC00963-214ENST00000622680 TARSP26639 723 aaKnown RBP12.05□□□□□ -0.48
LINC00963-214ENST00000622680 RPA1P27694 616 aa12.05□□□□□ -0.48
LINC00963-214ENST00000622680 OSTNP61366 133 aa12.05□□□□□ -0.48
LINC00963-214ENST00000622680 ROR1Q01973 937 aa12.05□□□□□ -0.48
LINC00963-214ENST00000622680 PRKCQQ04759 706 aa12.05□□□□□ -0.48
LINC00963-214ENST00000622680 CSTF1Q05048 431 aaKnown RBP12.05□□□□□ -0.48
LINC00963-214ENST00000622680 ZNF174Q15697 407 aa12.05□□□□□ -0.48
LINC00963-214ENST00000622680 ECM1Q16610 540 aa12.05□□□□□ -0.48
LINC00963-214ENST00000622680 UPP1Q16831 310 aa12.05□□□□□ -0.48
LINC00963-214ENST00000622680 TSSK4Q6SA08 328 aa12.05□□□□□ -0.48
LINC00963-214ENST00000622680 HEBP1Q9NRV9 189 aa12.05□□□□□ -0.48
LINC00963-214ENST00000622680 MRPS23Q9Y3D9 190 aaKnown RBP12.05□□□□□ -0.48
LINC00963-214ENST00000622680 WDR27A2RRH5 827 aa12.04□□□□□ -0.48
LINC00963-214ENST00000622680 SHISA7A6NL88 538 aa12.04□□□□□ -0.48
LINC00963-214ENST00000622680 CENPBP07199 599 aaPredicted RBP12.04□□□□□ -0.48
LINC00963-214ENST00000622680 RBM25P49756 843 aaKnown RBP12.04□□□□□ -0.48
LINC00963-214ENST00000622680 ARPP19P56211 112 aa12.04□□□□□ -0.48
LINC00963-214ENST00000622680 ANAPC15P60006 121 aa12.04□□□□□ -0.48
LINC00963-214ENST00000622680 GRM2Q14416 872 aa12.04□□□□□ -0.48
LINC00963-214ENST00000622680 NBR1Q14596 966 aa12.04□□□□□ -0.48
LINC00963-214ENST00000622680 PPP2R5AQ15172 486 aa12.04□□□□□ -0.48
LINC00963-214ENST00000622680 UVSSAQ2YD98 709 aa12.04□□□□□ -0.48
LINC00963-214ENST00000622680 TMEM130Q8N3G9 435 aa12.04□□□□□ -0.48
LINC00963-214ENST00000622680 ERMNQ8TAM6 284 aa12.04□□□□□ -0.48
LINC00963-214ENST00000622680 TCEAL4Q96EI5 215 aa12.04□□□□□ -0.48
LINC00963-214ENST00000622680 CDT1Q9H211 546 aa12.04□□□□□ -0.48
LINC00963-214ENST00000622680 BHMT2Q9H2M3 363 aa12.04□□□□□ -0.48
LINC00963-214ENST00000622680 NCDNQ9UBB6 729 aa12.04□□□□□ -0.48
LINC00963-214ENST00000622680 FBXO4Q9UKT5 387 aa12.04□□□□□ -0.48
LINC00963-214ENST00000622680 KCNH3Q9ULD8 1083 aa12.04□□□□□ -0.48
LINC00963-214ENST00000622680 SMIM28A0A1B0GU29 152 aa12.03□□□□□ -0.48
LINC00963-214ENST00000622680 SPTLC1O15269 473 aa12.03□□□□□ -0.48
LINC00963-214ENST00000622680 ECI2O75521 394 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms