RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 INHBCP55103 352 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 TLE3Q04726 772 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 POU5F1BQ06416 359 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 NCBP1Q09161 790 aaKnown RBP2.67□□□□□ -1.98
CPNE3-211ENST00000621526 MAPK8IP2Q13387 824 aaPredicted RBP2.67□□□□□ -1.98
CPNE3-211ENST00000621526 DMC1Q14565 340 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 SUZ12Q15022 739 aaKnown RBP2.67□□□□□ -1.98
CPNE3-211ENST00000621526 PON2Q15165 354 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 TARBP2Q15633 366 aaKnown RBP2.67□□□□□ -1.98
CPNE3-211ENST00000621526 SLC5A9Q2M3M2 681 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 ITPRIPL2Q3MIP1 535 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 PREPLQ4J6C6 727 aaPredicted RBP2.67□□□□□ -1.98
CPNE3-211ENST00000621526 CEP55Q53EZ4 464 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 TPGS2Q68CL5 300 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 LMBRD2Q68DH5 695 aaPredicted RBP2.67□□□□□ -1.98
CPNE3-211ENST00000621526 IQCEQ6IPM2 695 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 SLC8B1Q6J4K2 584 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 USP17L6PQ6QN14 398 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 CLEC18BQ6UXF7 455 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 PDZD4Q76G19 769 aaPredicted RBP2.67□□□□□ -1.98
CPNE3-211ENST00000621526 NIPA1Q7RTP0 329 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 SRGAP1Q7Z6B7 1085 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 CKAP2LQ8IYA6 745 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 SMAP1Q8IYB5 467 aaPredicted RBP2.67□□□□□ -1.98
CPNE3-211ENST00000621526 EXOC8Q8IYI6 725 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 STAG2Q8N3U4 1231 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 MINDY1Q8N5J2 469 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 CLEC18CQ8NCF0 446 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 DAGLBQ8NCG7 672 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 GSTCDQ8NEC7 633 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 SNIP1Q8TAD8 396 aaKnown RBP2.67□□□□□ -1.98
CPNE3-211ENST00000621526 SLC7A14Q8TBB6 771 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 ZSCAN18Q8TBC5 510 aaPredicted RBP2.67□□□□□ -1.98
CPNE3-211ENST00000621526 OXER1Q8TDS5 423 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 NLRP7Q8WX94 980 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 ACDQ96AP0 544 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 CNOT6LQ96LI5 555 aaKnown RBP2.67□□□□□ -1.98
CPNE3-211ENST00000621526 TBC1D32Q96NH3 1257 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 PIGSQ96S52 555 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 SEC62Q99442 399 aaKnown RBP2.67□□□□□ -1.98
CPNE3-211ENST00000621526 MAP3K14Q99558 947 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 P2RY13Q9BPV8 354 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 FAM83CQ9BQN1 747 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 JPH2Q9BR39 696 aaPredicted RBP2.67□□□□□ -1.98
CPNE3-211ENST00000621526 PSTPIP2Q9H939 334 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 AGO4Q9HCK5 861 aaKnown RBP2.67□□□□□ -1.98
CPNE3-211ENST00000621526 HCFC1R1Q9NWW0 138 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 MIOSQ9NXC5 875 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 ZSWIM5Q9P217 1185 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 MAD2L2Q9UI95 211 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 ZMYM5Q9UJ78 669 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 PCOLCE2Q9UKZ9 415 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 SRPK3Q9UPE1 567 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 SSUH2Q9Y2M2 353 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 PRG3Q9Y2Y8 225 aaPredicted RBP2.67□□□□□ -1.98
CPNE3-211ENST00000621526 PCDHA10Q9Y5I2 948 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 CELSR3Q9NYQ7 3312 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 NLRC5Q86WI3 1866 aa2.67□□□□□ -1.98
CPNE3-211ENST00000621526 SF3B1O75533 1304 aaKnown RBP eCLIP2.67□□□□□ -1.98
CPNE3-211ENST00000621526 COL4A3Q01955 1670 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 GREB1LQ9C091 1923 aaPredicted RBP2.66□□□□□ -1.98
CPNE3-211ENST00000621526 ZMYM2Q9UBW7 1377 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 A0A087WZ62 844 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 A0A0A0MRY4 1105 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 SPDYE3A6NKU9 549 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 SLC38A8A6NNN8 435 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 B4E1Z4 1266 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 NRG2O14511 850 aaPredicted RBP2.66□□□□□ -1.98
CPNE3-211ENST00000621526 DPYSL4O14531 572 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 ZNF213O14771 459 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 ADAM12O43184 909 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 AP5Z1O43299 807 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 SUV39H1O43463 412 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 TNFSF14O43557 240 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 TRAPPC3O43617 180 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 CYTH3O43739 400 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 CSDE1O75534 798 aaKnown RBP2.66□□□□□ -1.98
CPNE3-211ENST00000621526 ALDH1A2O94788 518 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 FGF19O95750 216 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 CCNE2O96020 404 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 LRG1P02750 347 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 PSAPP07602 524 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 SFTPCP11686 197 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 CEBPBP17676 345 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 POU3F2P20265 443 aaPredicted RBP2.66□□□□□ -1.98
CPNE3-211ENST00000621526 FGFR4P22455 802 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 FGFR3P22607 806 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 ELAVL4P26378 380 aaKnown RBP2.66□□□□□ -1.98
CPNE3-211ENST00000621526 ACTN2P35609 894 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 PTGER3P43115 390 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 SOX9P48436 509 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 CLCN3P51790 818 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 CACNB1Q02641 598 aaPredicted RBP2.66□□□□□ -1.98
CPNE3-211ENST00000621526 SCRN1Q12765 414 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 KCNH2Q12809 1159 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 ITGB3BPQ13352 177 aaPredicted RBP2.66□□□□□ -1.98
CPNE3-211ENST00000621526 RUNX3Q13761 415 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 HSP90AA2PQ14568 343 aaPredicted RBP2.66□□□□□ -1.98
CPNE3-211ENST00000621526 GRM4Q14833 912 aa2.66□□□□□ -1.98
CPNE3-211ENST00000621526 PSMD5Q16401 504 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms