RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 C18orf25Q96B23 403 aaPredicted RBP20.18■□□□□ 0.82
CIRBP-245ENST00000621399 TMEM169Q96HH4 297 aa20.18■□□□□ 0.82
CIRBP-245ENST00000621399 IGSF21Q96ID5 467 aa20.18■□□□□ 0.82
CIRBP-245ENST00000621399 TSPAN18Q96SJ8 248 aa20.18■□□□□ 0.82
CIRBP-245ENST00000621399 COLEC11Q9BWP8 271 aa20.18■□□□□ 0.82
CIRBP-245ENST00000621399 PUF60Q9UHX1 559 aaKnown RBP20.18■□□□□ 0.82
CIRBP-245ENST00000621399 LPXNO60711 386 aa20.17■□□□□ 0.82
CIRBP-245ENST00000621399 BMP6P22004 513 aa20.17■□□□□ 0.82
CIRBP-245ENST00000621399 IGFBP4P22692 258 aa20.17■□□□□ 0.82
CIRBP-245ENST00000621399 PPP1R2P41236 205 aa20.17■□□□□ 0.82
CIRBP-245ENST00000621399 PLCB3Q01970 1234 aa20.17■□□□□ 0.82
CIRBP-245ENST00000621399 ADGRE1Q14246 886 aa20.17■□□□□ 0.82
CIRBP-245ENST00000621399 SNRNP35Q16560 246 aaKnown RBP20.17■□□□□ 0.82
CIRBP-245ENST00000621399 JADE1Q6IE81 842 aa20.17■□□□□ 0.82
CIRBP-245ENST00000621399 TMEM173Q86WV6 379 aaPredicted RBP20.17■□□□□ 0.82
CIRBP-245ENST00000621399 SLC9A9Q8IVB4 645 aa20.17■□□□□ 0.82
CIRBP-245ENST00000621399 POF1BQ8WVV4 589 aa20.17■□□□□ 0.82
CIRBP-245ENST00000621399 FBXL18Q96ME1 805 aa20.17■□□□□ 0.82
CIRBP-245ENST00000621399 UROC1Q96N76 676 aa20.17■□□□□ 0.82
CIRBP-245ENST00000621399 GOLGA2P5Q9HBQ8 144 aa20.17■□□□□ 0.82
CIRBP-245ENST00000621399 CACNG4Q9UBN1 327 aa20.17■□□□□ 0.82
CIRBP-245ENST00000621399 PSMA7O14818 248 aa20.16■□□□□ 0.82
CIRBP-245ENST00000621399 XPOTO43592 962 aaKnown RBP20.16■□□□□ 0.82
CIRBP-245ENST00000621399 RPL13P26373 211 aaKnown RBP20.16■□□□□ 0.82
CIRBP-245ENST00000621399 UBE3AQ05086 875 aa20.16■□□□□ 0.82
CIRBP-245ENST00000621399 SOX4Q06945 474 aaPredicted RBP20.16■□□□□ 0.82
CIRBP-245ENST00000621399 MYBPC2Q14324 1141 aa20.16■□□□□ 0.82
CIRBP-245ENST00000621399 TMEM132DQ14C87 1099 aa20.16■□□□□ 0.82
CIRBP-245ENST00000621399 PTPROQ16827 1216 aa20.16■□□□□ 0.82
CIRBP-245ENST00000621399 TMEM174Q8WUU8 243 aa20.16■□□□□ 0.82
CIRBP-245ENST00000621399 BCL7CQ8WUZ0 217 aaPredicted RBP20.16■□□□□ 0.82
CIRBP-245ENST00000621399 DHTKD1Q96HY7 919 aaPredicted RBP20.16■□□□□ 0.82
CIRBP-245ENST00000621399 TSG101Q99816 390 aa20.16■□□□□ 0.82
CIRBP-245ENST00000621399 PAAF1Q9BRP4 392 aa20.16■□□□□ 0.82
CIRBP-245ENST00000621399 DMAC2Q9NW81 257 aa20.16■□□□□ 0.82
CIRBP-245ENST00000621399 TUBGCP4Q9UGJ1 667 aa20.16■□□□□ 0.82
CIRBP-245ENST00000621399 UBQLN1Q9UMX0 589 aaKnown RBP20.16■□□□□ 0.82
CIRBP-245ENST00000621399 DERAQ9Y315 318 aa20.16■□□□□ 0.82
CIRBP-245ENST00000621399 PPP1R3GB7ZBB8 358 aa20.15■□□□□ 0.82
CIRBP-245ENST00000621399 TADA2AO75478 443 aa20.15■□□□□ 0.82
CIRBP-245ENST00000621399 CSPG5O95196 566 aa20.15■□□□□ 0.82
CIRBP-245ENST00000621399 NFICP08651 508 aa20.15■□□□□ 0.82
CIRBP-245ENST00000621399 FOSL2P15408 326 aa20.15■□□□□ 0.82
CIRBP-245ENST00000621399 CD44P16070 742 aaKnown RBP20.15■□□□□ 0.82
CIRBP-245ENST00000621399 NR2F2P24468 414 aa20.15■□□□□ 0.82
CIRBP-245ENST00000621399 DNAJB1P25685 340 aa20.15■□□□□ 0.82
CIRBP-245ENST00000621399 CLCNKBP51801 687 aa20.15■□□□□ 0.82
CIRBP-245ENST00000621399 ZBTB6Q15916 424 aa20.15■□□□□ 0.82
CIRBP-245ENST00000621399 CENPPQ6IPU0 288 aa20.15■□□□□ 0.82
CIRBP-245ENST00000621399 KLHL10Q6JEL2 608 aa20.15■□□□□ 0.82
CIRBP-245ENST00000621399 DDX27Q96GQ7 796 aaKnown RBP20.15■□□□□ 0.82
CIRBP-245ENST00000621399 LMAN2LQ9H0V9 348 aa20.15■□□□□ 0.82
CIRBP-245ENST00000621399 PDE11AQ9HCR9 933 aa20.15■□□□□ 0.82
CIRBP-245ENST00000621399 MARCH5Q9NX47 278 aa20.15■□□□□ 0.82
CIRBP-245ENST00000621399 LZTS1Q9Y250 596 aa20.15■□□□□ 0.82
CIRBP-245ENST00000621399 C2CD2Q9Y426 696 aa20.15■□□□□ 0.82
CIRBP-245ENST00000621399 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.15■□□□□ 0.82
CIRBP-245ENST00000621399 RALGAPA2Q2PPJ7 1873 aa20.14■□□□□ 0.81
CIRBP-245ENST00000621399 F8W810 466 aa20.14■□□□□ 0.81
CIRBP-245ENST00000621399 CYP3A5P20815 502 aa20.14■□□□□ 0.81
CIRBP-245ENST00000621399 PTMSP20962 102 aa20.14■□□□□ 0.81
CIRBP-245ENST00000621399 RPL9P32969 192 aaKnown RBP20.14■□□□□ 0.81
CIRBP-245ENST00000621399 WNT7BP56706 349 aa20.14■□□□□ 0.81
CIRBP-245ENST00000621399 ADAM9Q13443 819 aa20.14■□□□□ 0.81
CIRBP-245ENST00000621399 SURF1Q15526 300 aa20.14■□□□□ 0.81
CIRBP-245ENST00000621399 NFIL3Q16649 462 aa20.14■□□□□ 0.81
CIRBP-245ENST00000621399 UPP1Q16831 310 aa20.14■□□□□ 0.81
CIRBP-245ENST00000621399 EDRF1Q3B7T1 1238 aa20.14■□□□□ 0.81
CIRBP-245ENST00000621399 ZCWPW2Q504Y3 356 aa20.14■□□□□ 0.81
CIRBP-245ENST00000621399 CEP135Q66GS9 1140 aa20.14■□□□□ 0.81
CIRBP-245ENST00000621399 DCLRE1AQ6PJP8 1040 aa20.14■□□□□ 0.81
CIRBP-245ENST00000621399 DDX53Q86TM3 631 aaKnown RBP20.14■□□□□ 0.81
CIRBP-245ENST00000621399 BEST2Q8NFU1 509 aa20.14■□□□□ 0.81
CIRBP-245ENST00000621399 MICAL1Q8TDZ2 1067 aa20.14■□□□□ 0.81
CIRBP-245ENST00000621399 MRPL38Q96DV4 380 aaKnown RBP20.14■□□□□ 0.81
CIRBP-245ENST00000621399 LMCD1Q9NZU5 365 aa20.14■□□□□ 0.81
CIRBP-245ENST00000621399 FRMD4BQ9Y2L6 1034 aa20.14■□□□□ 0.81
CIRBP-245ENST00000621399 CDH23Q9H251 3354 aa20.14■□□□□ 0.81
CIRBP-245ENST00000621399 COL6A3P12111 3177 aa20.14■□□□□ 0.81
CIRBP-245ENST00000621399 TRANK1O15050 2925 aa20.13■□□□□ 0.81
CIRBP-245ENST00000621399 A0A0C4DFX4 3053 aa20.13■□□□□ 0.81
CIRBP-245ENST00000621399 PODXLO00592 558 aa20.13■□□□□ 0.81
CIRBP-245ENST00000621399 B3GAT3O94766 335 aa20.13■□□□□ 0.81
CIRBP-245ENST00000621399 KIF4AO95239 1232 aa20.13■□□□□ 0.81
CIRBP-245ENST00000621399 CCNE1P24864 410 aa20.13■□□□□ 0.81
CIRBP-245ENST00000621399 TFAMQ00059 246 aaKnown RBP20.13■□□□□ 0.81
CIRBP-245ENST00000621399 CYP24A1Q07973 514 aa20.13■□□□□ 0.81
CIRBP-245ENST00000621399 CCDC183Q5T5S1 534 aa20.13■□□□□ 0.81
CIRBP-245ENST00000621399 SPATA1Q5VX52 437 aa20.13■□□□□ 0.81
CIRBP-245ENST00000621399 ANKRD40Q6AI12 368 aa20.13■□□□□ 0.81
CIRBP-245ENST00000621399 NT5DC4Q86YG4 428 aa20.13■□□□□ 0.81
CIRBP-245ENST00000621399 HASPINQ8TF76 798 aa20.13■□□□□ 0.81
CIRBP-245ENST00000621399 CCDC127Q96BQ5 260 aa20.13■□□□□ 0.81
CIRBP-245ENST00000621399 TLR9Q9NR96 1032 aa20.13■□□□□ 0.81
CIRBP-245ENST00000621399 STK39Q9UEW8 545 aa20.13■□□□□ 0.81
CIRBP-245ENST00000621399 ADAM28Q9UKQ2 775 aa20.13■□□□□ 0.81
CIRBP-245ENST00000621399 MTCH2Q9Y6C9 303 aa20.13■□□□□ 0.81
CIRBP-245ENST00000621399 NLRC5Q86WI3 1866 aa20.12■□□□□ 0.81
CIRBP-245ENST00000621399 KIAA1671Q9BY89 1806 aa20.12■□□□□ 0.81
CIRBP-245ENST00000621399 POU3F3P20264 500 aaPredicted RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms