RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 KCND2Q9NZV8 630 aa10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.35□□□□□ -0.75
CLTCL1-211ENST00000621271 NRKQ7Z2Y5 1582 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 PQBP1O60828 265 aaKnown RBP10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 CSF1RP07333 972 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 MYBP10242 640 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 ODC1P11926 461 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 NCF2P19878 526 aaPredicted RBP10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 SH3BGRP55822 239 aaPredicted RBP10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 C2orf54Q08AI8 447 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 OOSP2Q86WS3 158 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 SRBD1Q8N5C6 995 aaKnown RBP10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 NCLNQ969V3 563 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 TEX12Q9BXU0 123 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 HSPBP1Q9NZL4 362 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 NAGPAQ9UK23 515 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 TRIM49BA6NDI0 452 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 KPNA7A9QM74 516 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 PODXLO00592 558 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 MFAP3LO75121 409 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 SERPIND1P05546 499 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 SLCO1A2P46721 670 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 CAPRIN1Q14444 709 aaKnown RBP10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 E2F5Q15329 346 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 TMCO4Q5TGY1 634 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 TRIM68Q6AZZ1 485 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 ZC3H15Q8WU90 426 aaKnown RBP10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 PABPC5Q96DU9 382 aaKnown RBP10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 VPS11Q9H270 941 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 KCNF1Q9H3M0 494 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 KRT82Q9NSB4 513 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 AIPL1Q9NZN9 384 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 PP2D1A8MPX8 630 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 SMIM24O75264 130 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 ARHGDIAP52565 204 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 NCOA4Q13772 614 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 TOB2Q14106 344 aaPredicted RBP10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 SHCBP1Q8NEM2 672 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 RAPGEF5Q92565 580 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 FMO2Q99518 471 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 ABI2Q9NYB9 513 aaPredicted RBP10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 NEXMIFQ5QGS0 1516 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 TTLL13PA6NNM8 815 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 CFAP99D6REC4 459 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 PDHXO00330 501 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 GAS2O43903 313 aaKnown RBP10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 PDHBP11177 359 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 RASA1P20936 1047 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 IGFBP4P22692 258 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 TAF6P49848 677 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 KCNA1Q09470 495 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 ZKSCAN8Q15776 578 aaPredicted RBP10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 ZNF746Q6NUN9 644 aaPredicted RBP10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 EMBQ6PCB8 327 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 CHSY1Q86X52 802 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 RHOT1Q8IXI2 618 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 ATPAF2Q8N5M1 289 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 NT5C1AQ9BXI3 368 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 HMX1Q9NP08 348 aaPredicted RBP10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 CASS4Q9NQ75 786 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 TUBE1Q9UJT0 475 aa10.34□□□□□ -0.75
CLTCL1-211ENST00000621271 PDXKO00764 312 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 COPEO14579 308 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 APOL1O14791 398 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 RNASEH1O60930 286 aaKnown RBP10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 SYF2O95926 243 aaKnown RBP10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 MX2P20592 715 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 CYP2C19P33261 490 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 RGS7P49802 495 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 EIF2B5Q13144 721 aaKnown RBP10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 CDH18Q13634 790 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 SPATS2LQ9NUQ6 558 aaKnown RBP10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 DNAJC17Q9NVM6 304 aaKnown RBP10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 WDR35Q9P2L0 1181 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 PCDHGB4Q9UN71 923 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 SLC30A1Q9Y6M5 507 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 LGALS16A8MUM7 142 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 ZC3H11AO75152 810 aaKnown RBP eCLIP10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 FTLP02792 175 aaPredicted RBP10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 ICAM1P05362 532 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 STMN1P16949 149 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 PEX19P40855 299 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 PRCPP42785 496 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 TWF1Q12792 350 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 PLA2G4FQ68DD2 849 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 TRIM48Q8IWZ4 208 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 GPC2Q8N158 579 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 TAAR1Q96RJ0 339 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 GTSE1Q9NYZ3 720 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 UBQLN1Q9UMX0 589 aaKnown RBP10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 PTPRUQ92729 1446 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 B3GAT3O94766 335 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 EGFRP00533 1210 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 PGK2P07205 417 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 NR1D1P20393 614 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 CUL1Q13616 776 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 ANKRD20A4Q4UJ75 823 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 ANKRD20A8PQ5CZ79 823 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 ZNF484Q5JVG2 852 aa10.33□□□□□ -0.76
CLTCL1-211ENST00000621271 ANKRD20A2Q5SQ80 823 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms