RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 ERO1BQ86YB8 467 aa12.01□□□□□ -0.49
CLIP1-219ENST00000620786 ZBED8Q8IZ13 594 aa12.01□□□□□ -0.49
CLIP1-219ENST00000620786 ALDH8A1Q9H2A2 487 aaPredicted RBP12.01□□□□□ -0.49
CLIP1-219ENST00000620786 A0A0G2JND7 137 aa12.01□□□□□ -0.49
CLIP1-219ENST00000620786 KCNN4O15554 427 aa12.01□□□□□ -0.49
CLIP1-219ENST00000620786 HARS2P49590 506 aaKnown RBP12.01□□□□□ -0.49
CLIP1-219ENST00000620786 SNF8Q96H20 258 aa12.01□□□□□ -0.49
CLIP1-219ENST00000620786 PARD6BQ9BYG5 372 aa12.01□□□□□ -0.49
CLIP1-219ENST00000620786 CPA4Q9UI42 421 aa12.01□□□□□ -0.49
CLIP1-219ENST00000620786 ATP11BQ9Y2G3 1177 aa12.01□□□□□ -0.49
CLIP1-219ENST00000620786 GPR182O15218 404 aa12.01□□□□□ -0.49
CLIP1-219ENST00000620786 FOXN1O15353 648 aa12.01□□□□□ -0.49
CLIP1-219ENST00000620786 PPFIA2O75334 1257 aa12.01□□□□□ -0.49
CLIP1-219ENST00000620786 ODC1P11926 461 aa12.01□□□□□ -0.49
CLIP1-219ENST00000620786 GYS1P13807 737 aa12.01□□□□□ -0.49
CLIP1-219ENST00000620786 KLRK1P26718 216 aa12.01□□□□□ -0.49
CLIP1-219ENST00000620786 CAP2P40123 477 aa12.01□□□□□ -0.49
CLIP1-219ENST00000620786 NLRP11P59045 1033 aaKnown RBP12.01□□□□□ -0.49
CLIP1-219ENST00000620786 C10orf120Q5SQS8 335 aa12.01□□□□□ -0.49
CLIP1-219ENST00000620786 TDRD10Q5VZ19 366 aaKnown RBP12.01□□□□□ -0.49
CLIP1-219ENST00000620786 INTS5Q6P9B9 1019 aaKnown RBP12.01□□□□□ -0.49
CLIP1-219ENST00000620786 RBBP8NLQ8NC74 664 aaPredicted RBP12.01□□□□□ -0.49
CLIP1-219ENST00000620786 ARRDC4Q8NCT1 418 aa12.01□□□□□ -0.49
CLIP1-219ENST00000620786 SLC26A7Q8TE54 656 aa12.01□□□□□ -0.49
CLIP1-219ENST00000620786 C1orf54Q8WWF1 131 aa12.01□□□□□ -0.49
CLIP1-219ENST00000620786 KCNH7Q9NS40 1196 aa12.01□□□□□ -0.49
CLIP1-219ENST00000620786 A0A087WUV0 522 aaPredicted RBP12.01□□□□□ -0.49
CLIP1-219ENST00000620786 SLC26A4O43511 780 aa12.01□□□□□ -0.49
CLIP1-219ENST00000620786 NR1D1P20393 614 aa12.01□□□□□ -0.49
CLIP1-219ENST00000620786 ATN1P54259 1190 aaPredicted RBP12.01□□□□□ -0.49
CLIP1-219ENST00000620786 SNCBQ16143 134 aa12.01□□□□□ -0.49
CLIP1-219ENST00000620786 FASTKD1Q53R41 847 aaKnown RBP12.01□□□□□ -0.49
CLIP1-219ENST00000620786 ADCK2Q7Z695 626 aa12.01□□□□□ -0.49
CLIP1-219ENST00000620786 MFN1Q8IWA4 741 aa12.01□□□□□ -0.49
CLIP1-219ENST00000620786 OPTNQ96CV9 577 aa12.01□□□□□ -0.49
CLIP1-219ENST00000620786 GPRASP2Q96D09 838 aa12.01□□□□□ -0.49
CLIP1-219ENST00000620786 PABPC5Q96DU9 382 aaKnown RBP12.01□□□□□ -0.49
CLIP1-219ENST00000620786 THOC1Q96FV9 657 aaKnown RBP12.01□□□□□ -0.49
CLIP1-219ENST00000620786 TRIM55Q9BYV6 548 aa12.01□□□□□ -0.49
CLIP1-219ENST00000620786 FBXO2Q9UK22 296 aaPredicted RBP12.01□□□□□ -0.49
CLIP1-219ENST00000620786 APOBEC2Q9Y235 224 aaKnown RBP12.01□□□□□ -0.49
CLIP1-219ENST00000620786 ICAM1P05362 532 aa12□□□□□ -0.49
CLIP1-219ENST00000620786 SCP2P22307 547 aa12□□□□□ -0.49
CLIP1-219ENST00000620786 FSCBQ5H9T9 825 aa12□□□□□ -0.49
CLIP1-219ENST00000620786 EPM2AIP1Q7L775 607 aaPredicted RBP12□□□□□ -0.49
CLIP1-219ENST00000620786 SLC7A14Q8TBB6 771 aa12□□□□□ -0.49
CLIP1-219ENST00000620786 IGDCC4Q8TDY8 1250 aa12□□□□□ -0.49
CLIP1-219ENST00000620786 ATXN7L3BQ96GX2 97 aa12□□□□□ -0.49
CLIP1-219ENST00000620786 FOPNLQ96NB1 174 aa12□□□□□ -0.49
CLIP1-219ENST00000620786 NT5C1AQ9BXI3 368 aa12□□□□□ -0.49
CLIP1-219ENST00000620786 SENP1Q9P0U3 644 aa12□□□□□ -0.49
CLIP1-219ENST00000620786 PDGFRAP16234 1089 aa12□□□□□ -0.49
CLIP1-219ENST00000620786 GCLCP48506 637 aaPredicted RBP12□□□□□ -0.49
CLIP1-219ENST00000620786 DEUP1Q05D60 604 aa12□□□□□ -0.49
CLIP1-219ENST00000620786 BFSP2Q13515 415 aa12□□□□□ -0.49
CLIP1-219ENST00000620786 KCNB1Q14721 858 aa12□□□□□ -0.49
CLIP1-219ENST00000620786 DDIASQ8IXT1 998 aa12□□□□□ -0.49
CLIP1-219ENST00000620786 ZC3H15Q8WU90 426 aaKnown RBP12□□□□□ -0.49
CLIP1-219ENST00000620786 TEX12Q9BXU0 123 aa12□□□□□ -0.49
CLIP1-219ENST00000620786 POLLQ9UGP5 575 aa12□□□□□ -0.49
CLIP1-219ENST00000620786 PTPRUQ92729 1446 aa12□□□□□ -0.49
CLIP1-219ENST00000620786 FAM205CA6NFA0 338 aa12□□□□□ -0.49
CLIP1-219ENST00000620786 H7C4K7 107 aa12□□□□□ -0.49
CLIP1-219ENST00000620786 EEF1B2P24534 225 aaKnown RBP12□□□□□ -0.49
CLIP1-219ENST00000620786 RPS6P62753 249 aaKnown RBP12□□□□□ -0.49
CLIP1-219ENST00000620786 MEI1Q5TIA1 1274 aa12□□□□□ -0.49
CLIP1-219ENST00000620786 SLC30A5Q8TAD4 765 aa12□□□□□ -0.49
CLIP1-219ENST00000620786 TMEM169Q96HH4 297 aa12□□□□□ -0.49
CLIP1-219ENST00000620786 EPB41L4AQ9HCS5 686 aaPredicted RBP12□□□□□ -0.49
CLIP1-219ENST00000620786 ABI2Q9NYB9 513 aaPredicted RBP12□□□□□ -0.49
CLIP1-219ENST00000620786 AIPL1Q9NZN9 384 aa12□□□□□ -0.49
CLIP1-219ENST00000620786 APEX2Q9UBZ4 518 aa12□□□□□ -0.49
CLIP1-219ENST00000620786 INTUQ9ULD6 942 aa12□□□□□ -0.49
CLIP1-219ENST00000620786 DLC1Q96QB1 1528 aa12□□□□□ -0.49
CLIP1-219ENST00000620786 PIK3C2BO00750 1634 aa12□□□□□ -0.49
CLIP1-219ENST00000620786 DIP2CQ9Y2E4 1556 aa12□□□□□ -0.49
CLIP1-219ENST00000620786 PGK2P07205 417 aa12□□□□□ -0.49
CLIP1-219ENST00000620786 CHRNA3P32297 505 aa12□□□□□ -0.49
CLIP1-219ENST00000620786 SLC8A1P32418 973 aa12□□□□□ -0.49
CLIP1-219ENST00000620786 GNL1P36915 607 aaPredicted RBP12□□□□□ -0.49
CLIP1-219ENST00000620786 EXOSC10Q01780 885 aaKnown RBP12□□□□□ -0.49
CLIP1-219ENST00000620786 RFFLQ8WZ73 363 aa12□□□□□ -0.49
CLIP1-219ENST00000620786 PRMT6Q96LA8 375 aaPredicted RBP12□□□□□ -0.49
CLIP1-219ENST00000620786 RIT2Q99578 217 aa12□□□□□ -0.49
CLIP1-219ENST00000620786 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12□□□□□ -0.49
CLIP1-219ENST00000620786 KLK14Q9P0G3 267 aa12□□□□□ -0.49
CLIP1-219ENST00000620786 PPRC1Q5VV67 1664 aaKnown RBP12□□□□□ -0.49
CLIP1-219ENST00000620786 ARHGAP10A1A4S6 786 aa11.99□□□□□ -0.49
CLIP1-219ENST00000620786 C3orf70A6NLC5 250 aaPredicted RBP11.99□□□□□ -0.49
CLIP1-219ENST00000620786 MAPK13O15264 365 aa11.99□□□□□ -0.49
CLIP1-219ENST00000620786 PSMD3O43242 534 aa11.99□□□□□ -0.49
CLIP1-219ENST00000620786 EXTL3O43909 919 aa11.99□□□□□ -0.49
CLIP1-219ENST00000620786 SLC1A1P43005 524 aa11.99□□□□□ -0.49
CLIP1-219ENST00000620786 PMS2P54278 862 aa11.99□□□□□ -0.49
CLIP1-219ENST00000620786 SEMA3FQ13275 785 aa11.99□□□□□ -0.49
CLIP1-219ENST00000620786 YME1L1Q96TA2 773 aa11.99□□□□□ -0.49
CLIP1-219ENST00000620786 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.99□□□□□ -0.49
CLIP1-219ENST00000620786 PPARGC1AQ9UBK2 798 aaKnown RBP11.99□□□□□ -0.49
CLIP1-219ENST00000620786 IGSF9BQ9UPX0 1349 aa11.99□□□□□ -0.49
CLIP1-219ENST00000620786 RGL2O15211 777 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms