RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 PLA2G4BP0C869 781 aa5.31□□□□□ -1.56
VPS13D-214ENST00000620676 PSMC3P17980 439 aa5.31□□□□□ -1.56
VPS13D-214ENST00000620676 ADSSL1Q8N142 457 aa5.31□□□□□ -1.56
VPS13D-214ENST00000620676 NDUFAF2Q8N183 169 aa5.31□□□□□ -1.56
VPS13D-214ENST00000620676 KDM6BO15054 1643 aa5.31□□□□□ -1.56
VPS13D-214ENST00000620676 RCCD1A6NED2 376 aa5.31□□□□□ -1.56
VPS13D-214ENST00000620676 NEURL1BA8MQ27 555 aa5.31□□□□□ -1.56
VPS13D-214ENST00000620676 TRIM16O95361 564 aa5.31□□□□□ -1.56
VPS13D-214ENST00000620676 ODR4Q5SWX8 454 aa5.31□□□□□ -1.56
VPS13D-214ENST00000620676 DEPDC1Q5TB30 811 aa5.31□□□□□ -1.56
VPS13D-214ENST00000620676 SEPT3Q9UH03 358 aa5.31□□□□□ -1.56
VPS13D-214ENST00000620676 NEU2Q9Y3R4 380 aa5.31□□□□□ -1.56
VPS13D-214ENST00000620676 PMF1-BGLAPU3KQ54 211 aa5.31□□□□□ -1.56
VPS13D-214ENST00000620676 APOA1P02647 267 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 NPR1P16066 1061 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 SLC16A2P36021 539 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 MAGEA4P43358 317 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 SLC12A2P55011 1212 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 ALYREFQ86V81 257 aaKnown RBP5.3□□□□□ -1.56
VPS13D-214ENST00000620676 MARK4Q96L34 752 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 FAM111AQ96PZ2 611 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 RNPEPL1Q9HAU8 725 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 ANAPC7Q9UJX3 599 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 MAFGO15525 162 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 CDH3P22223 829 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 KCNH2Q12809 1159 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 PEX6Q13608 980 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 MYBPC2Q14324 1141 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 COL23A1Q86Y22 540 aaPredicted RBP5.3□□□□□ -1.56
VPS13D-214ENST00000620676 RAVER1Q8IY67 606 aaKnown RBP5.3□□□□□ -1.56
VPS13D-214ENST00000620676 PHF21AQ96BD5 680 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 PCDHGC5Q9Y5F6 944 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 RBM47A0AV96 593 aaKnown RBP5.3□□□□□ -1.56
VPS13D-214ENST00000620676 CALCAP01258 141 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 FAM58BPP0C7Q3 252 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 MKRN3Q13064 507 aaKnown RBP5.3□□□□□ -1.56
VPS13D-214ENST00000620676 BLMHQ13867 455 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 MORF4L2Q15014 288 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 SMU1Q2TAY7 513 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 ITPRIPL1Q6GPH6 555 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 CYP2R1Q6VVX0 501 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 TBCKQ8TEA7 893 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 ZC3H15Q8WU90 426 aaKnown RBP5.3□□□□□ -1.56
VPS13D-214ENST00000620676 OTULINQ96BN8 352 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 STK39Q9UEW8 545 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 ANO9A1A5B4 782 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 IRS4O14654 1257 aaPredicted RBP5.3□□□□□ -1.56
VPS13D-214ENST00000620676 RAD17O75943 681 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 CHRNA3P32297 505 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 NSFP46459 744 aaKnown RBP5.3□□□□□ -1.56
VPS13D-214ENST00000620676 TCIRG1Q13488 830 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 LPIN1Q14693 890 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 MROH9Q5TGP6 573 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 RHPN2Q8IUC4 686 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 MIER2Q8N344 545 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 LCORLQ8N3X6 602 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 CCNYQ8ND76 341 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 UNKQ9C0B0 810 aaKnown RBP5.3□□□□□ -1.56
VPS13D-214ENST00000620676 ARL8BQ9NVJ2 186 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 MED23Q9ULK4 1368 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 JAK1P23458 1154 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 POU5F1BQ06416 359 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 ST3GAL1Q11201 340 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 DRAP1Q14919 205 aaPredicted RBP5.3□□□□□ -1.56
VPS13D-214ENST00000620676 TJAP1Q5JTD0 557 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 TMC3Q7Z5M5 1100 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 HTRA1Q92743 480 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 C12orf65Q9H3J6 166 aaKnown RBP5.3□□□□□ -1.56
VPS13D-214ENST00000620676 GDF3Q9NR23 364 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 RASGRF1Q13972 1273 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 WASHC2DQ5SRD0 308 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 APLFQ8IW19 511 aaPredicted RBP5.3□□□□□ -1.56
VPS13D-214ENST00000620676 CAVIN3Q969G5 261 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 GRAMD1AQ96CP6 724 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 YIPF2Q9BWQ6 316 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 OSBPL8Q9BZF1 889 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 KIAA1586Q9HCI6 787 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 DKK3Q9UBP4 350 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 HADHAP40939 763 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 GPC5P78333 572 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 LAMC2Q13753 1193 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 KLC3Q6P597 504 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 CDHR1Q96JP9 859 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 EHMT1Q9H9B1 1298 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 MYO3BQ8WXR4 1341 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 CCRL2O00421 344 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 POTEIP0CG38 1075 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 FDPSP14324 419 aaKnown RBP5.3□□□□□ -1.56
VPS13D-214ENST00000620676 IRGCQ6NXR0 463 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 SCARA5Q6ZMJ2 495 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 ERP44Q9BS26 406 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 TBC1D10AQ9BXI6 508 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 UTYO14607 1347 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 ARHGEF37A1IGU5 675 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 E9PBE3 544 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 FOXD2O60548 495 aaPredicted RBP5.3□□□□□ -1.56
VPS13D-214ENST00000620676 DEAF1O75398 565 aaPredicted RBP5.3□□□□□ -1.56
VPS13D-214ENST00000620676 NR4A1P22736 598 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 STX3Q13277 289 aa5.3□□□□□ -1.56
VPS13D-214ENST00000620676 CDO1Q16878 200 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms