RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 LIN52Q52LA3 116 aa10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 ZNF772Q68DY9 489 aaPredicted RBP10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 RGS9BPQ6ZS82 235 aa10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 ANKLE1Q8NAG6 615 aa10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 RAB3IL1Q8TBN0 382 aa10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 TGFBRAP1Q8WUH2 860 aa10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 INPP5DQ92835 1189 aa10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 PLEKHG4BQ96PX9 1271 aa10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 TXLNGYQ9BZA5 131 aa10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 SH3GLB2Q9NR46 395 aa10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 PPARGC1AQ9UBK2 798 aaKnown RBP10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 TOGARAM1Q9Y4F4 1720 aa10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 OR6B1O95007 311 aa10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 CCNG1P51959 295 aa10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 BPIFB4P59827 614 aa10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 SLC13A5Q86YT5 568 aaPredicted RBP10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 APLFQ8IW19 511 aaPredicted RBP10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 FAM186BQ8IYM0 893 aa10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 ARHGAP24Q8N264 748 aa10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 SPATA16Q9BXB7 569 aa10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 TRIM55Q9BYV6 548 aa10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 ASCC2Q9H1I8 757 aaPredicted RBP10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 KCNQ5Q9NR82 932 aa10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 MARCOQ9UEW3 520 aaPredicted RBP10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 COG5Q9UP83 839 aa10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 ABCB11O95342 1321 aa10.38□□□□□ -0.75
TNFAIP3-210ENST00000620204 BAG3O95817 575 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 SERPINB2P05120 415 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 CETPP11597 493 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 PTGIRP43119 386 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 PSMC4P43686 418 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 GALK1P51570 392 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 DSG1Q02413 1049 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 MED21Q13503 144 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 NCAPG2Q86XI2 1143 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 NME8Q8N427 588 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 MYCT1Q8N699 235 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 SLC26A7Q8TE54 656 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 ZNF653Q96CK0 615 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 NSL1Q96IY1 281 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 RBM15Q96T37 977 aaKnown RBP eCLIP10.37□□□□□ -0.751e-6■■■■□ 19.4
TNFAIP3-210ENST00000620204 RIOK1Q9BRS2 568 aaKnown RBP10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 BTBD10Q9BSF8 475 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 SHCBP1LQ9BZQ2 653 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 NINJ2Q9NZG7 142 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 FAF1Q9UNN5 650 aaPredicted RBP10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 USP20Q9Y2K6 914 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 STXBP5LQ9Y2K9 1186 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 RIC1Q4ADV7 1423 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 SIPA1L3O60292 1781 aaPredicted RBP10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 ITGB4P16144 1822 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 ZSCAN9O15535 394 aaPredicted RBP10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 TMEM253P0C7T8 217 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 T-ENOLP0DO92 83 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 HSPA6P17066 643 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 AMPD1P23109 780 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 MECOMQ03112 1051 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 EN1Q05925 392 aaPredicted RBP10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 C2CD6Q53TS8 623 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 DGKHQ86XP1 1220 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 SH3TC2Q8TF17 1288 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 PTPRN2Q92932 1015 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 BCAS3Q9H6U6 928 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 CHST7Q9NS84 486 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 PRKAG3Q9UGI9 489 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 MAD2L2Q9UI95 211 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 TRAF3IP3Q9Y228 551 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 MYH4Q9Y623 1939 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 RSPH10B2B2RC85 870 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 SPATA31D3P0C874 917 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 RSPH10BP0C881 870 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 KLRK1P26718 216 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 KNOP1Q1ED39 458 aaKnown RBP10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 SPATA31D4Q6ZUB0 917 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 ANKMY2Q8IV38 441 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 LRRC47Q8N1G4 583 aaKnown RBP10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 SLC30A5Q8TAD4 765 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 SEC14L1Q92503 715 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 ELMO3Q96BJ8 720 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 BRIP1Q9BX63 1249 aa10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 DIS3Q9Y2L1 958 aaKnown RBP10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 TDRKHQ9Y2W6 561 aaKnown RBP10.37□□□□□ -0.75
TNFAIP3-210ENST00000620204 FOXN3O00409 490 aaPredicted RBP10.36□□□□□ -0.75
TNFAIP3-210ENST00000620204 GSC2O15499 205 aa10.36□□□□□ -0.75
TNFAIP3-210ENST00000620204 KRT4P19013 534 aa10.36□□□□□ -0.75
TNFAIP3-210ENST00000620204 VCAM1P19320 739 aa10.36□□□□□ -0.75
TNFAIP3-210ENST00000620204 YARSP54577 528 aaKnown RBP10.36□□□□□ -0.75
TNFAIP3-210ENST00000620204 IKQ13123 557 aaPredicted RBP10.36□□□□□ -0.75
TNFAIP3-210ENST00000620204 OTOAQ7RTW8 1153 aa10.36□□□□□ -0.75
TNFAIP3-210ENST00000620204 CLNKQ7Z7G1 428 aa10.36□□□□□ -0.75
TNFAIP3-210ENST00000620204 SLC5A5Q92911 643 aa10.36□□□□□ -0.75
TNFAIP3-210ENST00000620204 SNF8Q96H20 258 aa10.36□□□□□ -0.75
TNFAIP3-210ENST00000620204 ZSWIM1Q9BR11 485 aa10.36□□□□□ -0.75
TNFAIP3-210ENST00000620204 IQCGQ9H095 443 aaKnown RBP10.36□□□□□ -0.75
TNFAIP3-210ENST00000620204 IL17RBQ9NRM6 502 aa10.36□□□□□ -0.75
TNFAIP3-210ENST00000620204 ZNF232Q9UNY5 417 aa10.36□□□□□ -0.75
TNFAIP3-210ENST00000620204 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.36□□□□□ -0.75
TNFAIP3-210ENST00000620204 MIF4GDA9UHW6 222 aaKnown RBP10.36□□□□□ -0.75
TNFAIP3-210ENST00000620204 CHMP2AO43633 222 aa10.36□□□□□ -0.75
TNFAIP3-210ENST00000620204 DKC1O60832 514 aaKnown RBP eCLIP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms